Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_24862 Corylus avellana HOM05D007277 ORTHO05D006336 2.6e-305 1051.2 528 100.0
Haze_24863 Corylus avellana HOM05D000010 ORTHO05D006336 5.3e-80 302.8 256 68.0
Haze_02030 Corylus avellana HOM05D007277 ORTHO05D006336 1.3e-41 175.3 255 50.6
Cfa021203 Carpinus fangiana HOM05D007277 ORTHO05D006336 2.3e-38 164.5 127 70.9
Cfa002610 Carpinus fangiana HOM05D007277 ORTHO05D006336 1.9e-37 161.4 120 75.0
Haze_24866 Corylus avellana HOM05D007277 ORTHO05D006336 7.3e-37 159.5 127 68.5
Haze_27687 Corylus avellana HOM05D007277 ORTHO05D006336 4.7e-36 156.8 115 74.8
Haze_27688 Corylus avellana HOM05D007277 ORTHO05D006336 4.7e-36 156.8 115 74.8
Cfa002615 Carpinus fangiana HOM05D007277 ORTHO05D006336 6.2e-36 156.4 121 71.9
Cfa002609 Carpinus fangiana HOM05D007277 ORTHO05D006336 2.9e-33 147.5 114 71.9
Haze_24937 Corylus avellana HOM05D007277 ORTHO05D006336 7.8e-31 139.4 100 72.0
Cfa002614 Carpinus fangiana HOM05D007277 ORTHO05D006336 2.1e-28 131.3 96 70.8
QL07p042879 Quercus lobata HOM05D007277 ORTHO05D006336 1.1e-21 109.0 174 42.0
QL07p042903 Quercus lobata HOM05D007277 ORTHO05D006336 2.8e-20 104.4 132 50.0
QL07p042995 Quercus lobata HOM05D007277 ORTHO05D006336 2.4e-19 101.3 122 48.4
QL07p042928 Quercus lobata HOM05D007277 ORTHO05D006336 6.8e-19 99.8 160 41.9
Thecc.03G110900 Theobroma cacao HOM05D007277 ORTHO05D006336 2.0e-18 98.2 149 45.6
QL10p012835 Quercus lobata HOM05D007277 ORTHO05D006336 8.4e-17 92.8 129 39.5
QL07p042983 Quercus lobata HOM05D007277 ORTHO05D006336 1.1e-16 92.4 146 44.5
FAN18G2870 Fragaria x ananassa HOM05D000423 ORTHO05D000284 2.4e-16 91.3 357 28.9
Rhsim12G0165400 Rhododendron simsii HOM05D007277 ORTHO05D006336 4.2e-16 90.5 146 38.4
Ciclev10024167m.g Citrus clementina HOM05D007277 ORTHO05D006336 7.1e-16 89.7 152 37.5
QL07p042908 Quercus lobata HOM05D007277 ORTHO05D006336 7.1e-16 89.7 126 44.4
QL07p042874 Quercus lobata HOM05D007277 ORTHO05D006336 9.3e-16 89.4 133 44.4
Haze_24923 Corylus avellana HOM05D007277 ORTHO05D006336 1.6e-15 88.6 51 80.4
FAN08G3205 Fragaria x ananassa HOM05D007277 ORTHO05D006336 2.1e-15 88.2 92 46.7
Actinidia10434 Actinidia chinensis HOM05D007277 ORTHO05D006336 6.0e-15 86.7 98 48.0
Ciclev10029817m.g Citrus clementina HOM05D007277 ORTHO05D006336 7.8e-15 86.3 155 37.4
FAN18G0686 Fragaria x ananassa HOM05D007277 ORTHO05D006336 1.3e-14 85.5 149 37.6
FAN18G2501 Fragaria x ananassa HOM05D007277 ORTHO05D006336 2.3e-14 84.7 127 42.5
Atru.chr4.1305 Acer truncatum HOM05D010298 ORTHO05D006336 6.6e-14 83.2 158 36.1
Dinv38624 Davidia involucrata HOM05D007277 ORTHO05D006336 8.7e-14 82.8 112 40.2
FAN08G1790 Fragaria x ananassa HOM05D007277 ORTHO05D006336 2.5e-13 81.3 126 41.3
MD14G1141800 Malus domestica HOM05D007277 ORTHO05D006336 2.5e-13 81.3 113 42.5
QL10p052020 Quercus lobata HOM05D007277 ORTHO05D006336 2.5e-13 81.3 104 45.2
FvH4_5g13140 Fragaria vesca HOM05D007277 ORTHO05D006336 3.3e-13 80.9 127 40.9
FvH4_5g13170 Fragaria vesca HOM05D007277 ORTHO05D006336 3.3e-13 80.9 127 39.4
FAN18G3246 Fragaria x ananassa HOM05D007277 ORTHO05D006336 4.3e-13 80.5 127 40.9
FAN13G2869 Fragaria x ananassa HOM05D007277 ORTHO05D006336 5.6e-13 80.1 118 41.5
QL02p080387 Quercus lobata HOM05D007277 ORTHO05D006336 5.6e-13 80.1 126 41.3
Thecc.03G111200 Theobroma cacao HOM05D007277 ORTHO05D006336 5.6e-13 80.1 132 42.4
CSS0000915 Camellia sinensis var. sinensis HOM05D007277 ORTHO05D006336 7.3e-13 79.7 98 43.9
FvH4_5g13230 Fragaria vesca HOM05D007277 ORTHO05D006336 7.3e-13 79.7 127 40.2
Atru.chr9.2085 Acer truncatum HOM05D007277 ORTHO05D006336 9.6e-13 79.3 107 44.9
Prupe.1G109400 Prunus persica HOM05D007277 ORTHO05D006336 9.6e-13 79.3 127 40.9
FvH4_5g13190 Fragaria vesca HOM05D007277 ORTHO05D013598 1.3e-12 79.0 117 41.0
QL02p080510 Quercus lobata HOM05D007277 ORTHO05D006336 1.3e-12 79.0 145 37.9
QL10p051898 Quercus lobata HOM05D007277 ORTHO05D006336 1.3e-12 79.0 105 40.0
FvH4_5g13130 Fragaria vesca HOM05D007277 ORTHO05D006336 1.6e-12 78.6 135 38.5
MD03G1009100 Malus domestica HOM05D007277 ORTHO05D006336 1.6e-12 78.6 133 39.8
FvH4_5g13220 Fragaria vesca HOM05D007277 ORTHO05D006336 2.1e-12 78.2 133 36.8
Atru.chr4.1303 Acer truncatum HOM05D010298 ORTHO05D012539 3.6e-12 77.4 154 35.1
FAN08G1781 Fragaria x ananassa HOM05D007277 ORTHO05D006336 8.1e-12 76.3 110 40.9
FvH4_5g13221 Fragaria vesca HOM05D007277 ORTHO05D006336 1.1e-11 75.9 120 40.0
MD03G1011400 Malus domestica HOM05D007277 ORTHO05D006336 1.4e-11 75.5 112 39.3
Actinidia24268 Actinidia chinensis HOM05D007277 ORTHO05D006336 1.8e-11 75.1 127 33.9
Cpa.g.sc3.198 Carica papaya HOM05D007277 ORTHO05D006336 1.8e-11 75.1 103 46.6
MD03G1010100 Malus domestica HOM05D007277 ORTHO05D006336 1.8e-11 75.1 91 50.5
COL.COLO4_28831 Corchorus olitorius HOM05D007277 ORTHO05D006336 3.1e-11 74.3 134 41.8
QL09p028728 Quercus lobata HOM05D007277 ORTHO05D006336 4.0e-11 73.9 133 38.3
Dinv36831 Davidia involucrata HOM05D007277 ORTHO05D006336 5.3e-11 73.6 101 40.6
MD11G1013900 Malus domestica HOM05D007277 ORTHO05D006336 5.3e-11 73.6 114 39.5
Gohir.A07G058000 Gossypium hirsutum HOM05D007277 ORTHO05D006336 6.9e-11 73.2 134 38.8
Actinidia22592 Actinidia chinensis HOM05D007277 ORTHO05D006336 9.0e-11 72.8 124 33.9
QL10p047937 Quercus lobata HOM05D007277 ORTHO05D006336 1.2e-10 72.4 124 31.5
RcHm_v2.0_Chr7g0240781 Rosa chinensis HOM05D007277 ORTHO05D006336 1.2e-10 72.4 131 38.2
Ciclev10023596m.g Citrus clementina HOM05D010635 ORTHO05D006336 1.5e-10 72.0 129 33.3
MD03G1009500 Malus domestica HOM05D007277 ORTHO05D006336 1.5e-10 72.0 109 44.0
Prupe.6G011200 Prunus persica HOM05D007277 ORTHO05D006336 1.5e-10 72.0 108 43.5
Cpa.g.sc3.209 Carica papaya HOM05D007277 ORTHO05D006336 2.0e-10 71.6 95 46.3
Ciclev10023402m.g Citrus clementina HOM05D007277 ORTHO05D006336 2.0e-10 71.6 105 38.1
RcHm_v2.0_Chr7g0241491 Rosa chinensis HOM05D007277 ORTHO05D006336 2.0e-10 71.6 154 35.1
Gorai.001G066300 Gossypium raimondii HOM05D007277 ORTHO05D006336 2.6e-10 71.2 131 41.2
Prupe.6G011800 Prunus persica HOM05D007277 ORTHO05D006336 2.6e-10 71.2 160 35.6
Gohir.D07G062800 Gossypium hirsutum HOM05D007277 ORTHO05D006336 3.4e-10 70.9 126 38.1
QL11p034196 Quercus lobata HOM05D007277 ORTHO05D006336 3.4e-10 70.9 128 37.5
MD11G1013400 Malus domestica HOM05D007277 ORTHO05D006336 5.8e-10 70.1 130 37.7
Cpa.g.sc3.210 Carica papaya HOM05D007277 ORTHO05D006336 7.6e-10 69.7 103 45.6
Sed0012100 Sechium edule HOM05D014519 ORTHO05D006336 7.6e-10 69.7 128 38.3
Cpa.g.sc3.199 Carica papaya HOM05D007277 ORTHO05D006336 1.3e-09 68.9 101 44.6
Actinidia24271 Actinidia chinensis HOM05D007277 ORTHO05D006336 1.7e-09 68.6 95 35.8
MD12G1151700 Malus domestica HOM05D007277 ORTHO05D006336 2.9e-09 67.8 113 38.9
ClCG04G011490 Citrullus lanatus HOM05D014519 ORTHO05D006336 4.9e-09 67.0 106 38.7
Potri.017G022262 Populus trichocarpa HOM05D010635 ORTHO05D006336 4.9e-09 67.0 109 36.7
DCAR_010189 Daucus carota HOM05D007277 ORTHO05D006336 8.4e-09 66.2 102 36.3
TAR371G1039 Trochodendron aralioides HOM05D012741 ORTHO05D006336 8.4e-09 66.2 125 31.2
Ciclev10024327m.g Citrus clementina HOM05D007277 ORTHO05D006336 1.4e-08 65.5 94 41.5
Potri.017G021796 Populus trichocarpa HOM05D010635 ORTHO05D006336 1.4e-08 65.5 116 36.2
Atru.chr12.1464 Acer truncatum HOM05D007277 ORTHO05D006336 1.9e-08 65.1 127 33.9
Ciclev10023444m.g Citrus clementina HOM05D007277 ORTHO05D006336 7.1e-08 63.2 121 33.1
Potri.017G019000 Populus trichocarpa HOM05D010635 ORTHO05D006336 9.3e-08 62.8 104 36.5
Solyc03g114650.3 Solanum lycopersicum HOM05D007277 ORTHO05D006336 9.3e-08 62.8 135 31.9
Potri.017G019932 Populus trichocarpa HOM05D010635 ORTHO05D006336 1.2e-07 62.4 104 35.6
QL10p048111 Quercus lobata HOM05D010635 ORTHO05D006336 1.6e-07 62.0 131 32.8
Potri.017G149600 Populus trichocarpa HOM05D007277 ORTHO05D332074 2.1e-07 61.6 143 28.0
Prupe.6G011700 Prunus persica HOM05D007277 ORTHO05D006336 2.1e-07 61.6 101 40.6
Manes.05G115300 Manihot esculenta HOM05D007277 ORTHO05D006336 3.5e-07 60.8 108 41.7
QL07p042964 Quercus lobata HOM05D007277 ORTHO05D006336 4.6e-07 60.5 94 39.4
Sopen03g033720 Solanum pennellii HOM05D007277 ORTHO05D006336 4.6e-07 60.5 114 33.3
Sed0003907 Sechium edule HOM05D014519 ORTHO05D006336 1.3e-06 58.9 125 34.4
Sabra17G0002100 Salix brachista HOM05D010635 ORTHO05D006336 1.7e-06 58.5 127 29.9
Sed0019610 Sechium edule HOM05D014519 ORTHO05D006336 1.7e-06 58.5 114 34.2
Sabra17G0014600 Salix brachista HOM05D010635 ORTHO05D006336 3.0e-06 57.8 127 29.9
ClCG04G011480 Citrullus lanatus HOM05D014519 ORTHO05D006336 3.9e-06 57.4 101 34.7
FAN18G1844 Fragaria x ananassa HOM05D007277 ORTHO05D006336 8.7e-06 56.2 101 40.6
PGSC0003DMG400024676 Solanum tuberosum HOM05D007277 ORTHO05D006336 8.7e-06 56.2 107 35.5


User provided reference genes

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