Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_24799 Corylus avellana HOM05D002368 ORTHO05D002425 1.2e-43 179.5 92 100.0
Haze_24792 Corylus avellana HOM05D002368 ORTHO05D002425 4.1e-28 127.9 64 95.3
Haze_24796 Corylus avellana HOM05D002368 ORTHO05D002425 9.1e-28 126.7 72 84.7
Haze_24794 Corylus avellana HOM05D002368 ORTHO05D002425 1.1e-25 119.8 64 92.2
Haze_24800 Corylus avellana HOM05D002368 ORTHO05D002425 7.2e-17 90.5 51 88.2
MD05G1175500 Malus domestica HOM05D002368 ORTHO05D002425 2.8e-13 78.6 149 36.9
Dinv04650 Davidia involucrata HOM05D002368 ORTHO05D002425 7.0e-12 73.9 67 61.2
Prupe.8G203200 Prunus persica HOM05D002368 ORTHO05D002425 1.2e-11 73.2 63 65.1
MD10G1164600 Malus domestica HOM05D002368 ORTHO05D002425 3.5e-11 71.6 63 58.7
Gorai.007G154200 Gossypium raimondii HOM05D002368 ORTHO05D002425 5.9e-11 70.9 64 56.2
Glyma.18G153000 Glycine max HOM05D002368 ORTHO05D002425 7.8e-11 70.5 62 51.6
Thecc.01G226200 Theobroma cacao HOM05D002368 ORTHO05D002425 7.8e-11 70.5 98 42.9
FvH4_2g19070 Fragaria vesca HOM05D002368 ORTHO05D002425 1.0e-10 70.1 63 58.7
FAN15G2543 Fragaria x ananassa HOM05D002368 ORTHO05D001690 1.3e-10 69.7 63 58.7
Gohir.D11G144000 Gossypium hirsutum HOM05D002368 ORTHO05D002425 1.7e-10 69.3 64 54.7
Gohir.A11G137600 Gossypium hirsutum HOM05D002368 ORTHO05D002425 3.8e-10 68.2 152 32.2
RcHm_v2.0_Chr6g0284891 Rosa chinensis HOM05D002368 ORTHO05D002425 3.8e-10 68.2 63 57.1
Dinv19205 Davidia involucrata HOM05D002368 ORTHO05D002425 8.6e-10 67.0 64 59.4
CSS0013724 Camellia sinensis var. sinensis HOM05D002368 ORTHO05D002425 1.1e-09 66.6 66 54.5
ClCG07G001910 Citrullus lanatus HOM05D002368 ORTHO05D002425 1.5e-09 66.2 67 55.2
Manes.13G045600 Manihot esculenta HOM05D002368 ORTHO05D002425 2.5e-09 65.5 66 56.1
CsaV3_3G029900 Cucumis sativus L. HOM05D002368 ORTHO05D002425 7.3e-09 63.9 151 33.8
Duzib133G0390 Durio zibethinus HOM05D002368 ORTHO05D002425 1.6e-08 62.8 97 41.2
Rhsim13G0044900 Rhododendron simsii HOM05D002368 ORTHO05D002425 2.1e-08 62.4 67 53.7
MELO3C026997.2 Cucumis melo HOM05D002368 ORTHO05D002425 2.8e-08 62.0 64 54.7
vmacro02757 Vaccinium macrocarpon HOM05D002368 ORTHO05D002425 2.8e-08 62.0 66 50.0
Potri.002G242200 Populus trichocarpa HOM05D002368 ORTHO05D002425 3.6e-08 61.6 156 32.1
Oeu004065.1 Olea europaea HOM05D001586 ORTHO05D001543 8.0e-08 60.5 67 50.7
arahy.Tifrunner.gnm1.ann1.T08VJF Arachis hypogaea HOM05D002368 ORTHO05D002425 1.0e-07 60.1 64 50.0
arahy.Tifrunner.gnm1.ann1.VT94RC Arachis hypogaea HOM05D002368 ORTHO05D002425 1.0e-07 60.1 64 50.0
CiPaw.03G149400 Carya illinoinensis HOM05D002368 ORTHO05D002425 1.0e-07 60.1 160 31.9
Hma1.2p1_0226F.1_g095720 Hydrangea macrophylla HOM05D002368 ORTHO05D002425 1.4e-07 59.7 35 77.1
Phvul.010G010800 Phaseolus vulgaris HOM05D002368 ORTHO05D002425 1.4e-07 59.7 64 46.9
Ciclev10022517m.g Citrus clementina HOM05D002368 ORTHO05D002425 1.8e-07 59.3 64 51.6
Hma1.2p1_0226F.1_g095730 Hydrangea macrophylla HOM05D002368 ORTHO05D002425 2.3e-07 58.9 61 54.1
EL10Ac7g17835 Beta vulgaris HOM05D002368 ORTHO05D002425 3.0e-07 58.5 121 35.5
Cpa.g.sc8.157 Carica papaya HOM05D002368 ORTHO05D002425 5.2e-07 57.8 65 49.2
QL09p054545 Quercus lobata HOM05D002368 ORTHO05D002425 6.8e-07 57.4 64 51.6
Atru.chr5.2112 Acer truncatum HOM05D002368 ORTHO05D002425 8.9e-07 57.0 159 28.9
Peaxi162Scf00107g01915 Petunia axillaris HOM05D002368 ORTHO05D002425 8.9e-07 57.0 70 51.4
Nitab4.5_0000045g0160 Nicotiana tabacum HOM05D002368 ORTHO05D002425 1.2e-06 56.6 63 47.6
Ca_20081_v3 Cicer arietinum L. HOM05D002368 ORTHO05D002425 1.5e-06 56.2 77 41.6
Actinidia37591 Actinidia chinensis HOM05D002368 ORTHO05D002425 2.0e-06 55.8 66 48.5
Nn1g07851 Nelumbo nucifera HOM05D002368 ORTHO05D002425 2.0e-06 55.8 67 50.7
Sed0011469 Sechium edule HOM05D002368 ORTHO05D002425 2.0e-06 55.8 63 49.2
HanXRQChr01g0015121 Helianthus annuus HOM05D002368 ORTHO05D002425 2.6e-06 55.5 70 42.9
Aqoxy5G00075 Aquilegia oxysepala HOM05D002368 ORTHO05D002425 3.4e-06 55.1 64 50.0
Sopen09g024000 Solanum pennellii HOM05D002368 ORTHO05D002425 4.4e-06 54.7 66 47.0
TWI18G0623 Tripterygium wilfordii HOM05D002368 ORTHO05D002425 4.4e-06 54.7 64 46.9


User provided reference genes

Program Settings