Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_24797 Corylus avellana HOM05D010270 ORTHO05D011987 2.9e-87 325.1 155 100.0
Haze_24795 Corylus avellana HOM05D010270 ORTHO05D011987 3.2e-73 278.5 154 89.0
Haze_24798 Corylus avellana HOM05D010270 ORTHO05D011987 1.7e-58 229.6 172 69.8
Cfa002569 Carpinus fangiana HOM05D010270 ORTHO05D011987 3.3e-54 215.3 164 67.1
Cfa021186 Carpinus fangiana HOM05D010270 ORTHO05D011987 5.8e-51 204.5 143 69.9
Cfa016802 Carpinus fangiana HOM05D010270 ORTHO05D011987 3.1e-44 182.2 196 52.6
Cfa018822 Carpinus fangiana HOM05D010270 ORTHO05D011987 1.2e-32 143.7 132 53.0
Cfa002570 Carpinus fangiana HOM05D010270 ORTHO05D011987 7.9e-32 141.0 122 57.4
Cfa018807 Carpinus fangiana HOM05D010270 ORTHO05D011987 2.1e-29 132.9 156 47.4
Haze_24793 Corylus avellana HOM05D010270 ORTHO05D011987 1.4e-28 130.2 95 69.5
Cfa018804 Carpinus fangiana HOM05D010270 ORTHO05D011987 3.1e-28 129.0 135 52.6
Haze_07207 Corylus avellana HOM05D001885 ORTHO05D011987 1.5e-27 126.7 170 44.1
Haze_07206 Corylus avellana HOM05D001885 ORTHO05D011987 2.6e-27 125.9 132 50.0
Haze_24801 Corylus avellana HOM05D000091 ORTHO05D003024 3.4e-27 125.6 138 54.3
Cfa021219 Carpinus fangiana HOM05D010270 ORTHO05D011987 6.5e-26 121.3 158 43.7
Cfa018803 Carpinus fangiana HOM05D001885 ORTHO05D011987 8.4e-26 120.9 146 45.2
Cfa018854 Carpinus fangiana HOM05D010270 ORTHO05D011987 1.4e-25 120.2 132 49.2
Cfa019503 Carpinus fangiana HOM05D010270 ORTHO05D011987 9.3e-25 117.5 132 47.0
Cfa018805 Carpinus fangiana HOM05D010270 ORTHO05D011987 2.3e-23 112.8 153 44.4
Cfa018855 Carpinus fangiana HOM05D010270 ORTHO05D011987 1.1e-22 110.5 159 45.3
Haze_04524 Corylus avellana HOM05D010270 ORTHO05D011987 3.1e-20 102.4 135 37.0
Cfa005738 Carpinus fangiana HOM05D010270 ORTHO05D011987 8.5e-10 67.8 117 32.5
Cfa018814 Carpinus fangiana HOM05D013094 ORTHO05D034216 8.5e-10 67.8 99 34.3
Haze_07159 Corylus avellana HOM05D058322 ORTHO05D011987 1.4e-09 67.0 152 33.6
Haze_07204 Corylus avellana HOM05D013094 ORTHO05D034216 3.2e-09 65.9 99 34.3
Lalb_Chr04g0254901 Lupinus albus HOM05D000466 ORTHO05D000331 3.2e-09 65.9 125 36.0
Cfa019271 Carpinus fangiana HOM05D013094 ORTHO05D011987 9.4e-09 64.3 99 35.4
Cfa018802 Carpinus fangiana HOM05D001885 ORTHO05D011987 1.2e-08 63.9 114 37.7
DCAR_006236 Daucus carota HOM05D001039 ORTHO05D000874 1.2e-08 63.9 127 34.6
PSO170G0937 Papaver somniferum HOM05D000466 ORTHO05D000331 4.6e-08 62.0 141 28.4
Cfa018813 Carpinus fangiana HOM05D024495 ORTHO05D043567 7.9e-08 61.2 122 36.1
Haze_07201 Corylus avellana HOM05D013094 ORTHO05D164593 1.4e-07 60.5 99 33.3
DCAR_008572 Daucus carota HOM05D000466 ORTHO05D000331 2.3e-07 59.7 127 33.1
DCAR_009129 Daucus carota HOM05D000466 ORTHO05D000331 2.3e-07 59.7 127 33.1
Gohir.D09G132900 Gossypium hirsutum HOM05D000466 ORTHO05D000331 3.0e-07 59.3 114 35.1
Gorai.006G152400 Gossypium raimondii HOM05D000466 ORTHO05D000331 3.0e-07 59.3 114 35.1
DCAR_008574 Daucus carota HOM05D000466 ORTHO05D000331 3.9e-07 58.9 124 33.1
Nitab4.5_0012899g0010 Nicotiana tabacum HOM05D000466 ORTHO05D000331 3.9e-07 58.9 91 36.3
PGSC0003DMG400000811 Solanum tuberosum HOM05D000466 ORTHO05D000331 3.9e-07 58.9 101 35.6
Gohir.A09G141800 Gossypium hirsutum HOM05D000466 ORTHO05D000331 5.1e-07 58.5 114 35.1
Aa31LG5G21220 Aethionema arabicum HOM05D000466 ORTHO05D000331 6.7e-07 58.2 103 35.9
HanXRQChr12g0364751 Helianthus annuus HOM05D000466 ORTHO05D000331 6.7e-07 58.2 93 37.6
Lsat_1_v5_gn_8_38520 Lactuca sativa HOM05D000466 ORTHO05D000331 6.7e-07 58.2 93 36.6
Peaxi162Scf00086g00063 Petunia axillaris HOM05D000466 ORTHO05D000331 6.7e-07 58.2 95 40.0
Solyc05g009790.1 Solanum lycopersicum HOM05D000466 ORTHO05D000331 6.7e-07 58.2 101 35.6
Sopen05g005620 Solanum pennellii HOM05D000466 ORTHO05D000331 6.7e-07 58.2 101 35.6
Duzib106G0731 Durio zibethinus HOM05D000466 ORTHO05D000331 8.8e-07 57.8 95 35.8
Thhalv10017156m.g Eutrema salsugineum HOM05D000466 ORTHO05D000331 8.8e-07 57.8 108 36.1
SalBow8G2438 Salvia bowleyana HOM05D000466 ORTHO05D000331 8.8e-07 57.8 93 39.8
Thecc.05G096900 Theobroma cacao HOM05D000466 ORTHO05D000331 8.8e-07 57.8 95 35.8
A02p15390 Brassica napus HOM05D000466 ORTHO05D000331 1.1e-06 57.4 92 37.0
BraA02t06600Z Brassica rapa HOM05D000466 ORTHO05D000331 1.1e-06 57.4 92 37.0
CAN.G1982.6 Capsicum annuum HOM05D000466 ORTHO05D000331 1.1e-06 57.4 100 35.0
Ciclev10012300m.g Citrus clementina HOM05D000466 ORTHO05D000331 1.1e-06 57.4 113 31.0
DCAR_013418 Daucus carota HOM05D000466 ORTHO05D000331 1.1e-06 57.4 112 33.0
Nitab4.5_0000672g0020 Nicotiana tabacum HOM05D000466 ORTHO05D000331 1.1e-06 57.4 101 35.6
Peaxi162Scf00380g00041 Petunia axillaris HOM05D000466 ORTHO05D000331 1.1e-06 57.4 101 35.6
Atru.chr11.1347 Acer truncatum HOM05D000466 ORTHO05D000331 1.5e-06 57.0 93 37.6
Haze_18868 Corylus avellana HOM05D013094 ORTHO05D034216 1.5e-06 57.0 90 32.2
HanXRQChr08g0214331 Helianthus annuus HOM05D000466 ORTHO05D000331 1.5e-06 57.0 93 36.6
MD07G1162400 Malus domestica HOM05D000466 ORTHO05D000331 1.5e-06 57.0 115 33.9
Nitab4.5_0008588g0010 Nicotiana tabacum HOM05D000466 ORTHO05D000331 1.5e-06 57.0 93 37.6
VMungo1215G2596 Vigna mungo HOM05D000466 ORTHO05D000331 1.5e-06 57.0 128 31.2
COL.COLO4_29660 Corchorus olitorius HOM05D000466 ORTHO05D000331 2.0e-06 56.6 104 33.7
Migut.L01094 Erythranthe guttata HOM05D000466 ORTHO05D000331 2.0e-06 56.6 115 36.5
Lsat_1_v5_gn_1_78300 Lactuca sativa HOM05D000466 ORTHO05D000331 2.0e-06 56.6 95 33.7
Nn6g33829 Nelumbo nucifera HOM05D000466 ORTHO05D000331 2.0e-06 56.6 106 34.0
Actinidia16620 Actinidia chinensis HOM05D000466 ORTHO05D000331 2.5e-06 56.2 122 31.1
AT4G01500 Arabidopsis thaliana HOM05D000466 ORTHO05D000331 2.5e-06 56.2 108 33.3
MSTRG.13506 Avicennia marina HOM05D000466 ORTHO05D000331 2.5e-06 56.2 93 39.8
MSTRG.19283 Avicennia marina HOM05D000466 ORTHO05D000331 2.5e-06 56.2 96 36.5
A04p27620 Brassica napus HOM05D000466 ORTHO05D000331 2.5e-06 56.2 108 34.3
A05p09730 Brassica napus HOM05D000466 ORTHO05D000331 2.5e-06 56.2 108 35.2
C04p12130 Brassica napus HOM05D000466 ORTHO05D000331 2.5e-06 56.2 108 35.2
C04p65120 Brassica napus HOM05D000466 ORTHO05D000331 2.5e-06 56.2 108 34.3
BolC4t22854H Brassica oleracea HOM05D000466 ORTHO05D000331 2.5e-06 56.2 108 35.2
BraA04t18257Z Brassica rapa HOM05D000466 ORTHO05D000331 2.5e-06 56.2 108 34.3
BraA05t19929Z Brassica rapa HOM05D000466 ORTHO05D000331 2.5e-06 56.2 108 35.2
Duzib128G1916 Durio zibethinus HOM05D000466 ORTHO05D000331 2.5e-06 56.2 94 36.2
Aa31LG7G8940 Aethionema arabicum HOM05D000466 ORTHO05D000331 3.3e-06 55.8 91 35.2
BcaC02g11707 Brassica carinata HOM05D000466 ORTHO05D000331 3.3e-06 55.8 107 35.5
BcaC03g15000 Brassica carinata HOM05D000466 ORTHO05D000331 3.3e-06 55.8 92 37.0
C02p25460 Brassica napus HOM05D000466 ORTHO05D000331 3.3e-06 55.8 92 37.0
BolC2t08612H Brassica oleracea HOM05D000466 ORTHO05D000331 3.3e-06 55.8 92 37.0
CiPaw.04G040100 Carya illinoinensis HOM05D000466 ORTHO05D000331 3.3e-06 55.8 95 34.7
TWI63G1356 Tripterygium wilfordii HOM05D000466 ORTHO05D000331 3.3e-06 55.8 111 29.7
TWI79G1296 Tripterygium wilfordii HOM05D000466 ORTHO05D000331 3.3e-06 55.8 115 32.2
AL4G32170 Arabidopsis lyrata HOM05D000466 ORTHO05D000331 4.3e-06 55.5 108 35.2
AT2G36080 Arabidopsis thaliana HOM05D000466 ORTHO05D000331 4.3e-06 55.5 108 35.2
BcaB02g09387 Brassica carinata HOM05D000466 ORTHO05D000331 4.3e-06 55.5 108 34.3
BcaC02g07633 Brassica carinata HOM05D000466 ORTHO05D000331 4.3e-06 55.5 108 34.3
BolC4t27991H Brassica oleracea HOM05D000466 ORTHO05D000331 4.3e-06 55.5 108 34.3
Carub.0004s1782 Capsella rubella HOM05D000466 ORTHO05D000331 4.3e-06 55.5 108 35.2
Cc11_g10560 Coffea canephora HOM05D000466 ORTHO05D000331 4.3e-06 55.5 93 38.7
Psat2g090320 Pisum sativum HOM05D000466 ORTHO05D000331 4.3e-06 55.5 101 33.7
Rhsim03G0069500 Rhododendron simsii HOM05D000466 ORTHO05D000331 4.3e-06 55.5 102 36.3
SEGI_09423 Sequoiadendron giganteum HOM05D000466 ORTHO05D000331 4.3e-06 55.5 137 28.5
CARHR130320 Cardamine hirsuta HOM05D000466 ORTHO05D000331 5.7e-06 55.1 108 33.3
Ciclev10020450m.g Citrus clementina HOM05D000466 ORTHO05D000331 5.7e-06 55.1 98 34.7
Ciclev10031846m.g Citrus clementina HOM05D000466 ORTHO05D000331 5.7e-06 55.1 101 34.7
Haze_14124 Corylus avellana HOM05D000466 ORTHO05D000331 5.7e-06 55.1 93 35.5
Dinv16504 Davidia involucrata HOM05D000466 ORTHO05D000331 5.7e-06 55.1 123 31.7
Duzib093G1864 Durio zibethinus HOM05D000466 ORTHO05D000331 5.7e-06 55.1 95 33.7
FAN07G0290 Fragaria x ananassa HOM05D000466 ORTHO05D000331 5.7e-06 55.1 95 35.8
Hma1.2p1_0862F.1_g229920 Hydrangea macrophylla HOM05D000466 ORTHO05D000331 5.7e-06 55.1 113 32.7
Sabra10G0098300 Salix brachista HOM05D000466 ORTHO05D000331 5.7e-06 55.1 95 36.8
Sp4g18310 Schrenkiella parvula HOM05D000466 ORTHO05D000331 5.7e-06 55.1 108 34.3
BcaB05g24418 Brassica carinata HOM05D000466 ORTHO05D000331 7.4e-06 54.7 92 35.9
Cpa.g.sc46.140 Carica papaya HOM05D000466 ORTHO05D000331 7.4e-06 54.7 105 32.4
Cfa018625 Carpinus fangiana HOM05D000466 ORTHO05D000331 7.4e-06 54.7 93 35.5
ECA234G1296 Erigeron canadensis HOM05D001474 ORTHO05D001461 7.4e-06 54.7 93 34.4
Oeu010772.1 Olea europaea HOM05D000466 ORTHO05D000331 7.4e-06 54.7 93 38.7
QL02p052699 Quercus lobata HOM05D000466 ORTHO05D000331 7.4e-06 54.7 108 33.3
Zm00001eb342850 Zea mays HOM05D000466 ORTHO05D000331 7.4e-06 54.7 104 33.7
MSTRG.2259 Avicennia marina HOM05D000466 ORTHO05D000331 9.7e-06 54.3 93 36.6
CSS0022168 Camellia sinensis var. sinensis HOM05D000466 ORTHO05D000331 9.7e-06 54.3 94 36.2
Haze_17445 Corylus avellana HOM05D000466 ORTHO05D000331 9.7e-06 54.3 93 35.5
HanXRQChr17g0568051 Helianthus annuus HOM05D000466 ORTHO05D000331 9.7e-06 54.3 93 34.4
HanXRQChr17g0570531 Helianthus annuus HOM05D009784 ORTHO05D010235 9.7e-06 54.3 60 40.0
Medtr1g116920 Medicago truncatula HOM05D000466 ORTHO05D000331 9.7e-06 54.3 118 29.7
Psat6g242720 Pisum sativum HOM05D000466 ORTHO05D000331 9.7e-06 54.3 92 32.6


User provided reference genes

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