Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_24794 Corylus avellana HOM05D002368 ORTHO05D002425 6.8e-133 477.6 298 100.0
Haze_24796 Corylus avellana HOM05D002368 ORTHO05D002425 1.6e-41 174.1 137 72.3
Haze_24800 Corylus avellana HOM05D002368 ORTHO05D002425 2.3e-32 143.7 84 86.9
Haze_24799 Corylus avellana HOM05D002368 ORTHO05D002425 6.2e-25 119.0 64 92.2
Haze_24792 Corylus avellana HOM05D002368 ORTHO05D002425 1.0e-24 118.2 64 90.6
Dinv04650 Davidia involucrata HOM05D002368 ORTHO05D002425 1.4e-21 107.8 150 44.7
Dinv19205 Davidia involucrata HOM05D002368 ORTHO05D002425 1.3e-19 101.3 150 44.7
FvH4_2g19070 Fragaria vesca HOM05D002368 ORTHO05D002425 1.7e-19 100.9 137 43.8
Hma1.2p1_0226F.1_g095730 Hydrangea macrophylla HOM05D002368 ORTHO05D002425 6.6e-19 99.0 118 45.8
CiPaw.03G149400 Carya illinoinensis HOM05D002368 ORTHO05D002425 1.9e-18 97.4 149 44.3
CSS0013724 Camellia sinensis var. sinensis HOM05D002368 ORTHO05D002425 2.5e-18 97.1 137 42.3
RcHm_v2.0_Chr6g0284891 Rosa chinensis HOM05D002368 ORTHO05D002425 3.6e-17 93.2 137 41.6
vmacro02757 Vaccinium macrocarpon HOM05D002368 ORTHO05D002425 8.1e-17 92.0 137 41.6
Prupe.8G203200 Prunus persica HOM05D002368 ORTHO05D002425 1.4e-16 91.3 137 44.5
Gorai.007G154200 Gossypium raimondii HOM05D002368 ORTHO05D002425 5.2e-16 89.4 149 40.3
Hma1.2p1_0226F.1_g095720 Hydrangea macrophylla HOM05D002368 ORTHO05D002425 6.8e-16 89.0 118 44.1
Thecc.01G226200 Theobroma cacao HOM05D002368 ORTHO05D002425 6.8e-16 89.0 156 38.5
Gohir.D11G144000 Gossypium hirsutum HOM05D002368 ORTHO05D002425 1.5e-15 87.8 149 39.6
Gohir.A11G137600 Gossypium hirsutum HOM05D002368 ORTHO05D002425 5.8e-15 85.9 147 39.5
Nn1g07851 Nelumbo nucifera HOM05D002368 ORTHO05D002425 9.8e-15 85.1 155 38.7
Rhsim13G0044900 Rhododendron simsii HOM05D002368 ORTHO05D002425 1.7e-14 84.3 138 42.8
Glyma.18G153000 Glycine max HOM05D002368 ORTHO05D002425 2.2e-14 84.0 144 35.4
TWI18G0623 Tripterygium wilfordii HOM05D002368 ORTHO05D002425 2.2e-14 84.0 150 37.3
Manes.13G045600 Manihot esculenta HOM05D002368 ORTHO05D002425 2.9e-14 83.6 149 40.9
Duzib133G0390 Durio zibethinus HOM05D002368 ORTHO05D002425 8.3e-14 82.0 143 39.2
Ciclev10022517m.g Citrus clementina HOM05D002368 ORTHO05D002425 4.1e-13 79.7 137 39.4
Oeu004065.1 Olea europaea HOM05D001586 ORTHO05D001543 7.1e-13 79.0 141 37.6
Phvul.010G010800 Phaseolus vulgaris HOM05D002368 ORTHO05D002425 9.2e-13 78.6 147 34.7
arahy.Tifrunner.gnm1.ann1.T08VJF Arachis hypogaea HOM05D002368 ORTHO05D002425 1.2e-12 78.2 147 35.4
MD05G1175500 Malus domestica HOM05D002368 ORTHO05D002425 1.2e-12 78.2 149 37.6
arahy.Tifrunner.gnm1.ann1.VT94RC Arachis hypogaea HOM05D002368 ORTHO05D002425 1.6e-12 77.8 147 35.4
Cpa.g.sc8.157 Carica papaya HOM05D002368 ORTHO05D002425 2.1e-12 77.4 153 37.3
TWI36G0876 Tripterygium wilfordii HOM05D002368 ORTHO05D002425 3.5e-12 76.6 150 36.7
FAN15G2543 Fragaria x ananassa HOM05D002368 ORTHO05D001690 6.0e-12 75.9 251 28.3
Actinidia37591 Actinidia chinensis HOM05D002368 ORTHO05D002425 1.0e-11 75.1 137 39.4
Potri.002G242200 Populus trichocarpa HOM05D002368 ORTHO05D002425 1.0e-11 75.1 153 37.3
PGR044G2512 Punica granatum HOM05D002368 ORTHO05D002425 2.3e-11 73.9 153 35.9
GSVIVG01028638001 Vitis vinifera HOM05D002368 ORTHO05D002425 2.3e-11 73.9 137 37.2
Atru.chr5.2112 Acer truncatum HOM05D002368 ORTHO05D002425 3.9e-11 73.2 137 35.8
Medtr4g020080 Medicago truncatula HOM05D002368 ORTHO05D002425 1.5e-10 71.2 144 34.0
Cc01_g17040 Coffea canephora HOM05D002368 ORTHO05D002425 2.5e-10 70.5 140 34.3
MD10G1164600 Malus domestica HOM05D002368 ORTHO05D002425 3.3e-10 70.1 149 34.9
QL09p054545 Quercus lobata HOM05D002368 ORTHO05D002425 4.3e-10 69.7 149 34.9
Nitab4.5_0000045g0160 Nicotiana tabacum HOM05D002368 ORTHO05D002425 7.3e-10 68.9 149 34.9
Psat7g240240 Pisum sativum HOM05D002368 ORTHO05D002425 9.5e-10 68.6 144 32.6
CsaV3_3G029900 Cucumis sativus L. HOM05D002368 ORTHO05D002425 1.2e-09 68.2 138 37.0
PSO170G2832 Papaver somniferum HOM05D002368 ORTHO05D002425 1.2e-09 68.2 154 33.8
Sc17g0002330 Simmondsia chinensis HOM05D002368 ORTHO05D002425 1.2e-09 68.2 148 33.8
Ca_20081_v3 Cicer arietinum L. HOM05D002368 ORTHO05D002425 1.6e-09 67.8 149 32.2
ClCG07G001910 Citrullus lanatus HOM05D002368 ORTHO05D002425 1.6e-09 67.8 138 37.0
Eucgr.K02168 Eucalyptus grandis HOM05D002368 ORTHO05D002425 1.6e-09 67.8 153 34.6
Sc17g0002380 Simmondsia chinensis HOM05D002368 ORTHO05D002425 1.6e-09 67.8 136 34.6
Lsat_1_v5_gn_5_179481 Lactuca sativa HOM05D002368 ORTHO05D002425 2.1e-09 67.4 149 31.5
SalBow2G1685 Salvia bowleyana HOM05D002368 ORTHO05D002425 3.6e-09 66.6 160 32.5
Sopen09g024000 Solanum pennellii HOM05D002368 ORTHO05D002425 3.6e-09 66.6 149 32.9
EL10Ac7g17835 Beta vulgaris HOM05D002368 ORTHO05D002425 6.2e-09 65.9 139 33.1
Carub.0003s2523 Capsella rubella HOM05D002368 ORTHO05D002425 6.2e-09 65.9 150 33.3
Nitab4.5_0003312g0060 Nicotiana tabacum HOM05D002368 ORTHO05D002425 6.2e-09 65.9 141 35.5
MELO3C026997.2 Cucumis melo HOM05D002368 ORTHO05D002425 8.1e-09 65.5 138 36.2
Sed0011469 Sechium edule HOM05D002368 ORTHO05D002425 8.1e-09 65.5 137 34.3
A07p07400 Brassica napus HOM05D002368 ORTHO05D002425 1.1e-08 65.1 153 33.3
Duzib138G1378 Durio zibethinus HOM05D002368 ORTHO05D002425 1.4e-08 64.7 112 38.4
AT3G24820 Arabidopsis thaliana HOM05D002368 ORTHO05D002425 3.1e-08 63.5 150 32.7
CARHR101170 Cardamine hirsuta HOM05D002368 ORTHO05D002425 4.0e-08 63.2 149 33.6
Lj2C1131G8 Lonicera japonica HOM05D002368 ORTHO05D002425 4.0e-08 63.2 133 31.6
PSO764G0348 Papaver somniferum HOM05D002368 ORTHO05D002425 4.0e-08 63.2 156 32.1
AL3G40590 Arabidopsis lyrata HOM05D002368 ORTHO05D002425 6.8e-08 62.4 149 30.9
HanXRQChr01g0015121 Helianthus annuus HOM05D002368 ORTHO05D002425 6.8e-08 62.4 149 31.5
Ah.08g214260 Amaranthus hybridus HOM05D002368 ORTHO05D002425 8.9e-08 62.0 149 31.5
BraA07t28527Z Brassica rapa HOM05D002368 ORTHO05D002425 1.2e-07 61.6 149 32.2
MD13G1056300 Malus domestica HOM05D002368 ORTHO05D002425 1.5e-07 61.2 115 36.5
Aqoxy5G00075 Aquilegia oxysepala HOM05D002368 ORTHO05D002425 2.0e-07 60.8 150 34.0
SGA_v2.0_scaffold313G48290 Striga asiatica HOM05D002368 ORTHO05D002425 2.0e-07 60.8 112 38.4
SGA_v2.0_scaffold42G16135 Striga asiatica HOM05D000966 ORTHO05D002384 3.4e-07 60.1 110 33.6
Sp3g22560 Schrenkiella parvula HOM05D002368 ORTHO05D002425 5.8e-07 59.3 149 31.5
SpUn0027_0040 Schrenkiella parvula HOM05D002368 ORTHO05D002425 5.8e-07 59.3 149 31.5
AUR62031800 Chenopodium quinoa HOM05D002368 ORTHO05D002425 7.6e-07 58.9 168 28.0
AUR62008910 Chenopodium quinoa HOM05D002368 ORTHO05D002425 9.9e-07 58.5 157 29.9
ClCG05G023530 Citrullus lanatus HOM05D002368 ORTHO05D002425 9.9e-07 58.5 120 35.8
Migut.D00536 Erythranthe guttata HOM05D002368 ORTHO05D002425 9.9e-07 58.5 165 29.7
Lalb_Chr12g0209681 Lupinus albus HOM05D002368 ORTHO05D002425 1.3e-06 58.2 145 31.0
C07p11170 Brassica napus HOM05D002368 ORTHO05D002425 1.7e-06 57.8 149 32.2
BolC7t41589H Brassica oleracea HOM05D002368 ORTHO05D002425 1.7e-06 57.8 149 32.2
Lj3g0026716 Lotus japonicus HOM05D002368 ORTHO05D002425 1.7e-06 57.8 149 32.2
FAN17G2469 Fragaria x ananassa HOM05D001549 ORTHO05D003098 2.2e-06 57.4 112 33.9
unitig_899.g15239 Utricularia gibba HOM05D002368 ORTHO05D002425 2.2e-06 57.4 149 30.9
FAN07G0142 Fragaria x ananassa HOM05D002368 ORTHO05D002425 2.9e-06 57.0 128 33.6
FAN27G2737 Fragaria x ananassa HOM05D002368 ORTHO05D001690 2.9e-06 57.0 38 63.2
MD16G1055200 Malus domestica HOM05D002368 ORTHO05D002425 2.9e-06 57.0 141 31.9
Sed0005180 Sechium edule HOM05D002368 ORTHO05D002425 2.9e-06 57.0 120 32.5
CiPaw.05G121400 Carya illinoinensis HOM05D002368 ORTHO05D002425 3.8e-06 56.6 120 34.2
BcaC06g35761 Brassica carinata HOM05D002368 ORTHO05D002425 4.9e-06 56.2 149 32.2
FvH4_4g29270 Fragaria vesca HOM05D002368 ORTHO05D002425 6.4e-06 55.8 122 33.6
RcHm_v2.0_Chr4g0437321 Rosa chinensis HOM05D002368 ORTHO05D002425 8.4e-06 55.5 131 32.1


User provided reference genes

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