Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_24722 Corylus avellana HOM05D006210 ORTHO05D007510 6.0e-208 727.2 361 100.0
Cfa002496 Carpinus fangiana HOM05D006210 ORTHO05D007510 1.5e-166 589.7 390 81.0
CiPaw.03G272200 Carya illinoinensis HOM05D006210 ORTHO05D007510 5.2e-143 511.5 354 76.0
QL09p042418 Quercus lobata HOM05D006210 ORTHO05D007510 7.7e-139 497.7 371 72.5
Prupe.1G573100 Prunus persica HOM05D006210 ORTHO05D007510 9.2e-124 447.6 355 65.4
Hma1.2p1_2051F.1_g312580 Hydrangea macrophylla HOM05D006210 ORTHO05D007510 1.0e-122 444.1 354 68.4
GSVIVG01028451001 Vitis vinifera HOM05D006210 ORTHO05D007510 2.3e-122 443.0 354 67.2
Ciclev10020743m.g Citrus clementina HOM05D006210 ORTHO05D007510 8.6e-122 441.0 355 67.0
COL.COLO4_37372 Corchorus olitorius HOM05D006210 ORTHO05D007510 5.6e-121 438.3 337 67.1
Thecc.01G247800 Theobroma cacao HOM05D006210 ORTHO05D007510 5.6e-121 438.3 353 66.0
Actinidia30115 Actinidia chinensis HOM05D006210 ORTHO05D007510 5.2e-119 431.8 354 65.3
Gohir.D11G140400 Gossypium hirsutum HOM05D006210 ORTHO05D007510 5.2e-119 431.8 353 65.7
Potri.002G255300 Populus trichocarpa HOM05D006210 ORTHO05D007510 5.2e-119 431.8 355 66.8
Gohir.A11G134300 Gossypium hirsutum HOM05D006210 ORTHO05D007510 1.5e-118 430.3 353 65.4
TAR362G1053 Trochodendron aralioides HOM05D006210 ORTHO05D007510 2.6e-118 429.5 354 64.7
Manes.13G038600 Manihot esculenta HOM05D006210 ORTHO05D007510 1.1e-116 424.1 354 63.8
Duzib138G0227 Durio zibethinus HOM05D006210 ORTHO05D007510 1.4e-116 423.7 353 64.3
MELO3C012833.2 Cucumis melo HOM05D006210 ORTHO05D007510 3.2e-116 422.5 354 62.7
Sed0025577 Sechium edule HOM05D006210 ORTHO05D007510 9.2e-116 421.0 354 63.3
CsaV3_3G028470 Cucumis sativus L. HOM05D006210 ORTHO05D007510 1.6e-115 420.2 354 62.7
CANSAT01G0995 Cannabis sativa HOM05D006210 ORTHO05D007510 5.9e-115 418.3 354 63.3
VMungo0720G2771 Vigna mungo HOM05D006210 ORTHO05D007510 5.9e-115 418.3 348 64.9
Rhsim13G0040700 Rhododendron simsii HOM05D006210 ORTHO05D007510 1.3e-114 417.2 361 59.3
Lj1C76G7 Lonicera japonica HOM05D006210 ORTHO05D007510 1.7e-114 416.8 366 60.9
Dinv43053 Davidia involucrata HOM05D006210 ORTHO05D007510 2.3e-114 416.4 331 68.9
Phvul.007G154100 Phaseolus vulgaris HOM05D006210 ORTHO05D007510 6.6e-114 414.8 354 64.4
MBI10_g26060_MAGBIO Magnolia biondii HOM05D006210 ORTHO05D007510 8.6e-114 414.5 354 62.7
TWI18G1043 Tripterygium wilfordii HOM05D006210 ORTHO05D007510 8.6e-114 414.5 353 63.5
Glyma.13G127800 Glycine max HOM05D006210 ORTHO05D007510 4.3e-113 412.1 353 64.0
Atru.chr5.2084_Atru.chr5.2085 Acer truncatum HOM05D006210 ORTHO05D007510 1.0e-111 407.5 354 63.8
CSS0033273 Camellia sinensis var. sinensis HOM05D006210 ORTHO05D007510 1.0e-111 407.5 361 61.5
Cpa.g.sc87.54 Carica papaya HOM05D006210 ORTHO05D007510 1.4e-111 407.1 390 58.5
Nitab4.5_0000385g0060 Nicotiana tabacum HOM05D006210 ORTHO05D007510 3.1e-111 406.0 335 62.7
Peaxi162Scf00043g00235 Petunia axillaris HOM05D006210 ORTHO05D007510 3.1e-111 406.0 334 62.0
FvH4_2g20260 Fragaria vesca HOM05D006210 ORTHO05D007510 9.8e-110 401.0 354 62.1
Nn1g03023 Nelumbo nucifera HOM05D006210 ORTHO05D007510 9.8e-110 401.0 353 59.2
Glyma.10G040900 Glycine max HOM05D006210 ORTHO05D007510 1.3e-109 400.6 353 62.0
Ca_09640_v3 Cicer arietinum L. HOM05D006210 ORTHO05D007510 2.2e-109 399.8 353 63.5
Eucgr.A01369 Eucalyptus grandis HOM05D006210 ORTHO05D007510 2.2e-109 399.8 354 61.3
Oeu058104.1 Olea europaea HOM05D006210 ORTHO05D007510 8.3e-109 397.9 355 60.8
Aqoxy5G00102 Aquilegia oxysepala HOM05D006210 ORTHO05D007510 1.4e-108 397.1 355 60.8
arahy.Tifrunner.gnm1.ann1.6WB007 Arachis hypogaea HOM05D006210 ORTHO05D007510 2.4e-108 396.4 334 63.5
AUR62025420 Chenopodium quinoa HOM05D006210 ORTHO05D007510 3.2e-108 396.0 335 62.4
PSO210G7683 Papaver somniferum HOM05D006210 ORTHO05D007510 4.1e-108 395.6 355 61.4
MSTRG.22887 Avicennia marina HOM05D006210 ORTHO05D007510 1.6e-107 393.7 353 59.8
SalBow5G1930 Salvia bowleyana HOM05D006210 ORTHO05D007510 2.0e-107 393.3 365 56.2
Hund18317 Selenicereus undatus HOM05D006210 ORTHO05D007510 2.0e-107 393.3 354 61.0
FAN27G1100 Fragaria x ananassa HOM05D006210 ORTHO05D007510 2.7e-107 392.9 342 62.0
HanXRQChr10g0280241 Helianthus annuus HOM05D006210 ORTHO05D007510 3.5e-107 392.5 343 61.8
PSO170G6901 Papaver somniferum HOM05D006210 ORTHO05D007510 3.5e-107 392.5 355 61.1
TPR.G28794 Trifolium pratense HOM05D006210 ORTHO05D007510 6.0e-107 391.7 361 61.2
Lalb_Chr21g0314151 Lupinus albus HOM05D006210 ORTHO05D007510 1.7e-106 390.2 368 59.0
ClCG00G001600 Citrullus lanatus HOM05D006210 ORTHO05D007510 2.3e-106 389.8 350 60.9
PGR031G0293 Punica granatum HOM05D006210 ORTHO05D007510 8.6e-106 387.9 350 59.7
Lj5g0001397 Lotus japonicus HOM05D006210 ORTHO05D007510 5.6e-105 385.2 353 60.9
ECA247G1810 Erigeron canadensis HOM05D006210 ORTHO05D007510 1.2e-104 384.0 357 59.4
Psat6g064440 Pisum sativum HOM05D006210 ORTHO05D007510 2.1e-104 383.3 353 62.3
PGSC0003DMG400007719 Solanum tuberosum HOM05D006210 ORTHO05D007510 6.2e-104 381.7 360 57.5
Sopen09g025510 Solanum pennellii HOM05D006210 ORTHO05D007510 3.1e-103 379.4 359 56.3
ClCG07G001460 Citrullus lanatus HOM05D006210 ORTHO05D007510 4.0e-103 379.0 356 60.4
Migut.O00355 Erythranthe guttata HOM05D006210 ORTHO05D007510 6.8e-103 378.3 353 56.7
Sp1g02950 Schrenkiella parvula HOM05D006210 ORTHO05D007510 2.0e-102 376.7 354 57.9
THA.LOC104801120 Tarenaya hassleriana HOM05D006210 ORTHO05D007510 2.0e-102 376.7 351 59.5
AT1G04130 Arabidopsis thaliana HOM05D006210 ORTHO05D007510 2.6e-102 376.3 353 58.1
AL1G13730 Arabidopsis lyrata HOM05D006210 ORTHO05D007510 5.8e-102 375.2 353 58.1
A09p68040 Brassica napus HOM05D006210 ORTHO05D007510 9.8e-102 374.4 349 58.2
Sabra02G0194000 Salix brachista HOM05D006210 ORTHO05D007510 9.8e-102 374.4 354 59.6
SGA_v2.0_scaffold382G50403 Striga asiatica HOM05D006210 ORTHO05D007510 9.8e-102 374.4 350 55.7
BcaC07g42211 Brassica carinata HOM05D006210 ORTHO05D007510 1.3e-101 374.0 355 56.9
Thhalv10008004m.g Eutrema salsugineum HOM05D006210 ORTHO05D007510 4.9e-101 372.1 353 58.1
arahy.Tifrunner.gnm1.ann1.GM89QY Arachis hypogaea HOM05D006210 ORTHO05D007510 6.4e-101 371.7 320 62.8
CARHR003480 Cardamine hirsuta HOM05D006210 ORTHO05D007510 6.4e-101 371.7 353 57.5
BraA09t42139Z Brassica rapa HOM05D006210 ORTHO05D007510 3.2e-100 369.4 374 54.8
C08p52480 Brassica napus HOM05D006210 ORTHO05D007510 5.4e-100 368.6 350 57.1
Aa31LG1G20710 Aethionema arabicum HOM05D006210 ORTHO05D007510 9.2e-100 367.9 356 55.6
Carub.0001s0328 Capsella rubella HOM05D006210 ORTHO05D007510 1.2e-99 367.5 354 57.1
BolC8t52775H Brassica oleracea HOM05D006210 ORTHO05D007510 7.8e-99 364.8 379 54.1
unitig_22.g6263 Utricularia gibba HOM05D006210 ORTHO05D007510 2.3e-98 363.2 367 53.4
arahy.Tifrunner.gnm1.ann1.J3R5E0 Arachis hypogaea HOM05D006210 ORTHO05D007510 2.8e-96 356.3 339 60.2
Ah.15g091520 Amaranthus hybridus HOM05D006210 ORTHO05D007510 2.3e-95 353.2 347 54.5
Cc01_g17680 Coffea canephora HOM05D006210 ORTHO05D007510 3.8e-93 345.9 343 55.4
ATR0723G059 Amborella trichopoda HOM05D006210 ORTHO05D007510 1.1e-92 344.4 334 55.7
AUR62008821 Chenopodium quinoa HOM05D006210 ORTHO05D007510 8.6e-90 334.7 335 55.8
BcaC07g42208 Brassica carinata HOM05D006210 ORTHO05D007510 1.1e-89 334.3 364 51.9
SEGI_04783 Sequoiadendron giganteum HOM05D006210 ORTHO05D007510 3.4e-86 322.8 355 49.3
Prupe.8G213100 Prunus persica HOM05D006210 ORTHO05D007510 1.1e-81 307.8 336 54.5
Zm00001eb057360 Zea mays HOM05D006210 ORTHO05D007510 6.9e-79 298.5 364 45.6
Nitab4.5_0000392g0100 Nicotiana tabacum HOM05D006210 ORTHO05D007510 4.2e-76 289.3 312 52.6
Gorai.007G150600 Gossypium raimondii HOM05D006210 ORTHO05D007510 1.9e-73 280.4 311 53.1
MD10G1174300 Malus domestica HOM05D006210 ORTHO05D007510 7.4e-73 278.5 183 76.0
Hma1.2p1_2051F.1_g312575 Hydrangea macrophylla HOM05D006210 ORTHO05D007510 1.8e-71 273.9 182 78.6
HPP92_025825 Vanilla planifolia HOM05D006210 ORTHO05D007510 6.9e-71 271.9 335 48.4
CAN.G119.7 Capsicum annuum HOM05D006210 ORTHO05D007510 1.4e-68 264.2 193 71.0
Mapoly0012s0146 Marchantia polymorpha HOM05D006210 ORTHO05D007510 2.4e-68 263.5 353 42.5
DCAR_000557 Daucus carota HOM05D006210 ORTHO05D007510 5.5e-68 262.3 183 73.2
arahy.Tifrunner.gnm1.ann1.5C4SPF Arachis hypogaea HOM05D006210 ORTHO05D007510 7.9e-67 258.5 183 71.0
FAN24G1818 Fragaria x ananassa HOM05D006210 ORTHO05D007510 5.1e-66 255.8 183 71.6
RcHm_v2.0_Chr6g0286041 Rosa chinensis HOM05D006210 ORTHO05D007510 1.9e-65 253.8 183 71.6
Lsat_1_v5_gn_9_11700 Lactuca sativa HOM05D006210 ORTHO05D007510 4.8e-64 249.2 191 68.6
Solyc09g064380.3 Solanum lycopersicum HOM05D006210 ORTHO05D007510 9.0e-63 245.0 193 66.8
Pp3c19_11990 Physcomitrium patens HOM05D006210 ORTHO05D007510 1.7e-61 240.7 353 41.1
Sc05g0002800 Simmondsia chinensis HOM05D006210 ORTHO05D007510 1.6e-51 207.6 251 47.0
EL10Ac7g17713 Beta vulgaris HOM05D006210 ORTHO05D007510 7.9e-51 205.3 183 59.6
MD10G1174200 Malus domestica HOM05D006210 ORTHO05D007510 7.9e-51 205.3 159 65.4
AagrBONN_evm.TU.Sc2ySwM_228.4049__4050 Anthoceros agrestis HOM05D006210 ORTHO05D007510 1.5e-49 201.1 230 45.7
Os03g0750100 Oryza sativa ssp. japonica HOM05D006210 ORTHO05D007510 1.4e-47 194.5 269 44.2
CBR_g36953 Chara braunii HOM05D006210 ORTHO05D007510 1.2e-46 191.4 332 38.6
RcHm_v2.0_Chr6g0286031 Rosa chinensis HOM05D006210 ORTHO05D007510 1.1e-41 174.9 159 61.0
Hma1.2p1_0559F.1_g178660 Hydrangea macrophylla HOM05D000705 ORTHO05D007510 4.5e-38 162.9 107 77.6
DCAR_000556 Daucus carota HOM05D006210 ORTHO05D007510 2.2e-37 160.6 152 57.2
HanXRQChr01g0013201 Helianthus annuus HOM05D006210 ORTHO05D007510 2.5e-36 157.1 166 54.8
CAN.G119.6 Capsicum annuum HOM05D006210 ORTHO05D007510 3.0e-34 150.2 150 50.7
PRCOL_00004543 Prasinoderma coloniale HOM05D006210 ORTHO05D007510 4.8e-32 142.9 354 31.6
vmacro02716 Vaccinium macrocarpon HOM05D006210 ORTHO05D007510 1.5e-28 131.3 99 62.6
Cre08.g375650 Chlamydomonas reinhardtii HOM05D006210 ORTHO05D007510 1.2e-27 128.3 335 29.9
Actinidia37561 Actinidia chinensis HOM05D006210 ORTHO05D007510 2.2e-24 117.5 99 65.7
MCO01G218 Micromonas commoda HOM05D006210 ORTHO05D007510 2.8e-24 117.1 352 29.5
MD05G1186300 Malus domestica HOM05D006210 ORTHO05D007510 4.1e-23 113.2 119 51.3
Sc05g0002820 Simmondsia chinensis HOM05D006210 ORTHO05D007510 4.1e-23 113.2 117 53.8
TAR349G0001 Trochodendron aralioides HOM05D006210 ORTHO05D007510 7.0e-23 112.5 102 62.7
MD05G1186500 Malus domestica HOM05D006210 ORTHO05D007510 1.8e-18 97.8 60 76.7
SEGI_25119 Sequoiadendron giganteum HOM05D006210 ORTHO05D007510 5.0e-13 79.7 49 67.3
Thhalv10023436m.g Eutrema salsugineum HOM05D001340 ORTHO05D005342 4.9e-08 63.2 138 34.1
BraA03t15714Z Brassica rapa HOM05D001340 ORTHO05D005342 7.0e-07 59.3 137 37.2
Zm00001eb416010 Zea mays HOM05D017284 ORTHO05D007510 1.2e-06 58.5 42 57.1
Potri.005G014100 Populus trichocarpa HOM05D001340 ORTHO05D005342 3.5e-06 57.0 118 33.9
Mapoly0087s0002 Marchantia polymorpha HOM05D003388 ORTHO05D003616 4.5e-06 56.6 144 31.2


User provided reference genes

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