Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_24720 Corylus avellana HOM05D001799 ORTHO05D001655 6.7e-156 553.9 265 100.0
Cfa002496 Carpinus fangiana HOM05D006210 ORTHO05D007510 8.4e-42 174.9 105 85.7
CiPaw.03G272100 Carya illinoinensis HOM05D001799 ORTHO05D001655 2.2e-21 107.1 113 56.6
Oeu026802.3 Olea europaea HOM05D001799 ORTHO05D001655 8.5e-18 95.1 122 50.8
Prupe.8G213400 Prunus persica HOM05D001799 ORTHO05D001655 1.9e-17 94.0 110 56.4
GSVIVG01028449001 Vitis vinifera HOM05D001799 ORTHO05D001655 3.6e-16 89.7 103 55.3
Oeu039650.1 Olea europaea HOM05D001799 ORTHO05D001655 4.6e-16 89.4 118 48.3
Rhsim13G0040600 Rhododendron simsii HOM05D001799 ORTHO05D001655 1.0e-15 88.2 120 46.7
CANSAT01G0634 Cannabis sativa HOM05D001799 ORTHO05D001655 1.8e-15 87.4 105 53.3
Actinidia23705 Actinidia chinensis HOM05D001799 ORTHO05D001655 2.3e-15 87.0 112 50.0
Hma1.2p1_1224F.1_g268440 Hydrangea macrophylla HOM05D001799 ORTHO05D001655 3.0e-15 86.7 125 48.0
Actinidia09508 Actinidia chinensis HOM05D001799 ORTHO05D001655 3.9e-15 86.3 112 49.1
vmacro02715 Vaccinium macrocarpon HOM05D001799 ORTHO05D001655 5.1e-15 85.9 123 45.5
RcHm_v2.0_Chr6g0286061 Rosa chinensis HOM05D001799 ORTHO05D001655 1.1e-14 84.7 110 48.2
Manes.13G038700 Manihot esculenta HOM05D001799 ORTHO05D001655 3.3e-14 83.2 112 50.0
Nn3g19824 Nelumbo nucifera HOM05D001799 ORTHO05D001655 3.3e-14 83.2 114 48.2
MBI07_g23235_MAGBIO Magnolia biondii HOM05D001799 ORTHO05D001655 4.3e-14 82.8 115 46.1
Gohir.D08G056500 Gossypium hirsutum HOM05D001799 ORTHO05D001655 5.7e-14 82.4 116 46.6
Medtr1g069440 Medicago truncatula HOM05D001799 ORTHO05D001655 1.7e-13 80.9 111 46.8
Cpa.g.sc87.51 Carica papaya HOM05D001799 ORTHO05D001655 2.8e-13 80.1 118 47.5
SalBow4G1659 Salvia bowleyana HOM05D001799 ORTHO05D001655 3.7e-13 79.7 123 42.3
Gorai.004G057600 Gossypium raimondii HOM05D001799 ORTHO05D001655 4.8e-13 79.3 116 45.7
Lsat_1_v5_gn_5_180101 Lactuca sativa HOM05D001799 ORTHO05D001655 4.8e-13 79.3 117 45.3
Gohir.A08G046000 Gossypium hirsutum HOM05D001799 ORTHO05D001655 6.3e-13 79.0 115 42.6
Gohir.D11G140300 Gossypium hirsutum HOM05D001799 ORTHO05D001655 6.3e-13 79.0 115 47.0
Gorai.007G150500 Gossypium raimondii HOM05D001799 ORTHO05D001655 6.3e-13 79.0 115 47.0
Gohir.A11G134200 Gossypium hirsutum HOM05D001799 ORTHO05D001655 8.2e-13 78.6 115 47.0
MBI10_g26045_MAGBIO Magnolia biondii HOM05D001799 ORTHO05D001655 8.2e-13 78.6 115 42.6
Cc01_g17690 Coffea canephora HOM05D001799 ORTHO05D001655 1.1e-12 78.2 113 49.6
TAR633G1919 Trochodendron aralioides HOM05D001799 ORTHO05D001655 1.1e-12 78.2 116 46.6
Duzib138G0086 Durio zibethinus HOM05D001799 ORTHO05D001655 1.8e-12 77.4 118 45.8
MSTRG.18361 Avicennia marina HOM05D001799 ORTHO05D001655 2.4e-12 77.0 132 40.2
Eucgr.K01404 Eucalyptus grandis HOM05D001799 ORTHO05D001655 2.4e-12 77.0 100 50.0
FAN24G0550 Fragaria x ananassa HOM05D001799 ORTHO05D001655 3.1e-12 76.6 108 49.1
Duzib133G0885 Durio zibethinus HOM05D001799 ORTHO05D001655 4.1e-12 76.3 115 43.5
Migut.D00488 Erythranthe guttata HOM05D001799 ORTHO05D001655 4.1e-12 76.3 122 44.3
TAR349G0003 Trochodendron aralioides HOM05D001799 ORTHO05D001655 6.9e-12 75.5 111 46.8
Ciclev10019675m.g Citrus clementina HOM05D001799 ORTHO05D001655 1.2e-11 74.7 103 47.6
Manes.12G038900 Manihot esculenta HOM05D001799 ORTHO05D001655 1.2e-11 74.7 112 47.3
Psat6g064480 Pisum sativum HOM05D001799 ORTHO05D001655 1.5e-11 74.3 113 47.8
arahy.Tifrunner.gnm1.ann1.2D12SM Arachis hypogaea HOM05D001799 ORTHO05D001655 2.0e-11 73.9 115 44.3
Thecc.01G247900 Theobroma cacao HOM05D001799 ORTHO05D001655 2.0e-11 73.9 115 44.3
TWI18G0889 Tripterygium wilfordii HOM05D001799 ORTHO05D001655 2.6e-11 73.6 112 44.6
Aqoxy5G00108 Aquilegia oxysepala HOM05D001799 ORTHO05D001655 4.5e-11 72.8 107 44.9
Dinv43054 Davidia involucrata HOM05D001799 ORTHO05D001655 4.5e-11 72.8 117 45.3
Duzib211G0692 Durio zibethinus HOM05D001799 ORTHO05D001655 4.5e-11 72.8 115 42.6
FvH4_2g20270 Fragaria vesca HOM05D001799 ORTHO05D001655 4.5e-11 72.8 110 45.5
Ca_09641_v3 Cicer arietinum L. HOM05D001799 ORTHO05D001655 5.9e-11 72.4 112 44.6
arahy.Tifrunner.gnm1.ann1.XD4QRI Arachis hypogaea HOM05D001799 ORTHO05D001655 7.7e-11 72.0 117 44.4
MD05G1186600 Malus domestica HOM05D001799 ORTHO05D001655 7.7e-11 72.0 113 48.7
Potri.002G255400 Populus trichocarpa HOM05D001799 ORTHO05D001655 7.7e-11 72.0 123 43.9
CSS0002635 Camellia sinensis var. sinensis HOM05D001799 ORTHO05D001655 1.0e-10 71.6 110 40.9
QL09p042405 Quercus lobata HOM05D001799 ORTHO05D001655 1.0e-10 71.6 114 39.5
Glyma.13G127600 Glycine max HOM05D001799 ORTHO05D001655 1.7e-10 70.9 112 46.4
Oeu052094.1 Olea europaea HOM05D001799 ORTHO05D001655 1.7e-10 70.9 119 42.0
Sopen09g025540 Solanum pennellii HOM05D001799 ORTHO05D001655 2.2e-10 70.5 121 43.0
Eucgr.K01406 Eucalyptus grandis HOM05D001799 ORTHO05D001655 3.8e-10 69.7 99 47.5
Actinidia37560 Actinidia chinensis HOM05D001799 ORTHO05D001655 1.1e-09 68.2 117 42.7
Atru.chr5.1957 Acer truncatum HOM05D001799 ORTHO05D001655 1.4e-09 67.8 101 46.5
Sabra02G0194000 Salix brachista HOM05D006210 ORTHO05D007510 1.4e-09 67.8 122 41.8
FAN15G1895 Fragaria x ananassa HOM05D001799 ORTHO05D001655 1.9e-09 67.4 106 45.3
SGA_v2.0_scaffold1G00676 Striga asiatica HOM05D001799 ORTHO05D001655 1.9e-09 67.4 138 35.5
DCAR_000558 Daucus carota HOM05D001799 ORTHO05D001655 2.5e-09 67.0 122 39.3
TWI75G0966 Tripterygium wilfordii HOM05D001799 ORTHO05D001655 2.5e-09 67.0 113 39.8
Glyma.03G168500 Glycine max HOM05D001799 ORTHO05D001655 4.2e-09 66.2 113 41.6
Lsat_1_v5_gn_8_91040 Lactuca sativa HOM05D001799 ORTHO05D001655 4.2e-09 66.2 127 40.9
arahy.Tifrunner.gnm1.ann1.TYPP4C Arachis hypogaea HOM05D001799 ORTHO05D001655 5.5e-09 65.9 120 39.2
TPR.G35718 Trifolium pratense HOM05D001799 ORTHO05D001655 7.2e-09 65.5 117 44.4
PGSC0003DMG400007720 Solanum tuberosum HOM05D001799 ORTHO05D001655 9.4e-09 65.1 116 43.1
Nn1g03020 Nelumbo nucifera HOM05D001799 ORTHO05D001655 1.6e-08 64.3 103 39.8
Rhsim01G0259600 Rhododendron simsii HOM05D001799 ORTHO05D001655 1.6e-08 64.3 105 41.9
COL.COLO4_20962 Corchorus olitorius HOM05D001799 ORTHO05D001655 2.7e-08 63.5 118 35.6
Aa31LG8G17290 Aethionema arabicum HOM05D001799 ORTHO05D001655 4.7e-08 62.8 112 38.4
Lalb_Chr02g0152781 Lupinus albus HOM05D001799 ORTHO05D001655 4.7e-08 62.8 111 45.0
Glyma.19G169900 Glycine max HOM05D001799 ORTHO05D001655 6.1e-08 62.4 111 39.6
DCAR_018528 Daucus carota HOM05D031924 ORTHO05D001655 1.4e-07 61.2 125 38.4
BcaC06g36714 Brassica carinata HOM05D001799 ORTHO05D001655 1.8e-07 60.8 105 37.1
BolC7t40521H Brassica oleracea HOM05D001799 ORTHO05D001655 1.8e-07 60.8 105 37.1
CAN.G119.8 Capsicum annuum HOM05D001799 ORTHO05D001655 2.3e-07 60.5 75 52.0
Solyc09g064420.4 Solanum lycopersicum HOM05D001799 ORTHO05D001655 3.9e-07 59.7 87 44.8
Nitab4.5_0000385g0050 Nicotiana tabacum HOM05D001799 ORTHO05D001655 5.1e-07 59.3 113 42.5
Aqoxy1G01803 Aquilegia oxysepala HOM05D001799 ORTHO05D001655 8.8e-07 58.5 72 50.0
EL10Ac7g17710 Beta vulgaris HOM05D001799 ORTHO05D001655 2.0e-06 57.4 133 36.8
Psat3g052240 Pisum sativum HOM05D001799 ORTHO05D001655 2.6e-06 57.0 116 37.9
vmacro14789 Vaccinium macrocarpon HOM05D001799 ORTHO05D001655 7.4e-06 55.5 108 39.8


User provided reference genes

Program Settings