Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_24710 Corylus avellana HOM05D006027 ORTHO05D007604 2.8e-92 342.0 184 100.0
Cfa002488 Carpinus fangiana HOM05D006027 ORTHO05D007604 5.8e-82 307.8 166 99.4
QL09p041558 Quercus lobata HOM05D006027 ORTHO05D007604 1.3e-78 296.6 184 82.1
Prupe.8G215000 Prunus persica HOM05D006027 ORTHO05D007604 2.3e-75 285.8 184 78.3
Gohir.A07G152700 Gossypium hirsutum HOM05D006027 ORTHO05D007604 3.4e-74 282.0 187 78.6
Gohir.D07G158900 Gossypium hirsutum HOM05D006027 ORTHO05D007604 4.4e-74 281.6 185 78.4
Gorai.001G182100 Gossypium raimondii HOM05D006027 ORTHO05D007604 7.6e-74 280.8 187 78.6
Duzib138G0534 Durio zibethinus HOM05D006027 ORTHO05D007604 1.7e-73 279.6 188 78.7
Thecc.01G249800 Theobroma cacao HOM05D006027 ORTHO05D007604 2.2e-73 279.3 187 79.1
GSVIVG01028434001 Vitis vinifera HOM05D006027 ORTHO05D007604 2.4e-72 275.8 184 76.6
FAN15G2830 Fragaria x ananassa HOM05D006027 ORTHO05D007604 3.2e-72 275.4 185 77.3
FAN27G2528 Fragaria x ananassa HOM05D006027 ORTHO05D007604 3.2e-72 275.4 185 77.3
Duzib211G0648 Durio zibethinus HOM05D006027 ORTHO05D007604 4.1e-72 275.0 187 76.5
MD05G1188500 Malus domestica HOM05D006027 ORTHO05D007604 7.1e-72 274.2 184 76.6
FvH4_2g20470 Fragaria vesca HOM05D006027 ORTHO05D007604 3.5e-71 271.9 185 76.2
FAN24G3422 Fragaria x ananassa HOM05D006027 ORTHO05D007604 3.5e-71 271.9 185 76.2
Eucgr.K01424 Eucalyptus grandis HOM05D006027 ORTHO05D007604 1.3e-70 270.0 185 75.1
Manes.12G038000 Manihot esculenta HOM05D006027 ORTHO05D007604 3.0e-70 268.9 184 72.3
Atru.chr5.1865 Acer truncatum HOM05D006027 ORTHO05D007604 5.1e-70 268.1 186 73.1
CANSAT01G0515 Cannabis sativa HOM05D006027 ORTHO05D007604 5.1e-70 268.1 188 73.9
CANSAT01G2333 Cannabis sativa HOM05D006027 ORTHO05D007604 5.1e-70 268.1 188 73.9
TAR633G0397 Trochodendron aralioides HOM05D006027 ORTHO05D007604 8.6e-70 267.3 188 76.1
MD10G1176000 Malus domestica HOM05D006027 ORTHO05D007604 1.1e-69 266.9 184 73.9
Dinv43066 Davidia involucrata HOM05D006027 ORTHO05D007604 2.5e-69 265.8 184 74.5
Potri.002G256400 Populus trichocarpa HOM05D006027 ORTHO05D007604 3.3e-69 265.4 185 75.1
Sabra02G0194900 Salix brachista HOM05D006027 ORTHO05D007604 4.3e-69 265.0 185 74.6
Manes.13G039500 Manihot esculenta HOM05D006027 ORTHO05D007604 9.6e-69 263.8 185 73.0
Glyma.13G127200 Glycine max HOM05D006027 ORTHO05D007604 1.1e-67 260.4 186 73.1
Lalb_Chr02g0152741 Lupinus albus HOM05D006027 ORTHO05D007604 1.8e-67 259.6 184 72.8
Aqoxy5G00130 Aquilegia oxysepala HOM05D006027 ORTHO05D007604 4.0e-67 258.5 189 72.0
TWI18G0031 Tripterygium wilfordii HOM05D006027 ORTHO05D007604 6.8e-67 257.7 184 71.2
Nitab4.5_0000845g0140 Nicotiana tabacum HOM05D006027 ORTHO05D007604 1.5e-66 256.5 184 72.8
PGSC0003DMG400008585 Solanum tuberosum HOM05D006027 ORTHO05D007604 2.0e-66 256.1 184 73.4
MELO3C022393.2 Cucumis melo HOM05D006027 ORTHO05D007604 2.6e-66 255.8 185 71.9
Sopen09g025650 Solanum pennellii HOM05D006027 ORTHO05D007604 2.6e-66 255.8 184 72.8
TAR362G0914 Trochodendron aralioides HOM05D006027 ORTHO05D007604 2.6e-66 255.8 186 73.7
CAN.G536.12 Capsicum annuum HOM05D006027 ORTHO05D007604 3.4e-66 255.4 184 72.3
Lalb_Chr06g0170731 Lupinus albus HOM05D006027 ORTHO05D007604 3.4e-66 255.4 184 73.4
Nitab4.5_0002435g0010 Nicotiana tabacum HOM05D006027 ORTHO05D007604 3.4e-66 255.4 184 72.3
VMungo0720G1620 Vigna mungo HOM05D006027 ORTHO05D007604 5.8e-66 254.6 184 72.8
Solyc09g064500.3 Solanum lycopersicum HOM05D006027 ORTHO05D007604 7.6e-66 254.2 184 72.3
SGA_v2.0_scaffold1G00660 Striga asiatica HOM05D006027 ORTHO05D007604 7.6e-66 254.2 186 71.5
Migut.D00479 Erythranthe guttata HOM05D006027 ORTHO05D007604 9.9e-66 253.8 185 71.4
vmacro14793 Vaccinium macrocarpon HOM05D006027 ORTHO05D007604 1.3e-65 253.4 184 72.3
PGR044G2038 Punica granatum HOM05D006027 ORTHO05D007604 1.7e-65 253.1 185 71.4
Nn3g19801 Nelumbo nucifera HOM05D006027 ORTHO05D007604 2.9e-65 252.3 185 71.9
Glyma.10G040600 Glycine max HOM05D006027 ORTHO05D007604 4.9e-65 251.5 184 70.7
Actinidia23700 Actinidia chinensis HOM05D006027 ORTHO05D007604 6.4e-65 251.1 186 70.4
CSS0012566 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 6.4e-65 251.1 185 69.7
CSS0010160 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 8.4e-65 250.8 185 69.7
Phvul.007G153500 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 8.4e-65 250.8 184 72.3
ClCG06G001400 Citrullus lanatus HOM05D006027 ORTHO05D007604 3.2e-64 248.8 187 70.6
Medtr1g069465 Medicago truncatula HOM05D006027 ORTHO05D007604 9.3e-64 247.3 185 71.4
Lj5g0017558 Lotus japonicus HOM05D006027 ORTHO05D007604 1.6e-63 246.5 184 70.1
PSO764G0320 Papaver somniferum HOM05D006027 ORTHO05D007604 2.1e-63 246.1 188 70.2
Actinidia09513 Actinidia chinensis HOM05D006027 ORTHO05D007604 2.7e-63 245.7 186 68.8
Cc01_g17770 Coffea canephora HOM05D006027 ORTHO05D007604 2.7e-63 245.7 184 69.6
arahy.Tifrunner.gnm1.ann1.72UZ71 Arachis hypogaea HOM05D006027 ORTHO05D007604 3.5e-63 245.4 184 70.1
arahy.Tifrunner.gnm1.ann1.FRV526 Arachis hypogaea HOM05D006027 ORTHO05D007604 3.5e-63 245.4 184 70.1
DCAR_000568 Daucus carota HOM05D006027 ORTHO05D007604 4.6e-63 245.0 184 69.6
TPR.G5919 Trifolium pratense HOM05D006027 ORTHO05D007604 1.3e-62 243.4 185 71.9
PSO832G0858 Papaver somniferum HOM05D006027 ORTHO05D007604 1.7e-62 243.0 187 69.5
Ca_09646_v3 Cicer arietinum L. HOM05D006027 ORTHO05D007604 1.9e-61 239.6 185 68.6
Ciclev10022322m.g Citrus clementina HOM05D006027 ORTHO05D007604 3.3e-61 238.8 176 71.0
Lj1C74G4 Lonicera japonica HOM05D006027 ORTHO05D007604 4.3e-61 238.4 162 75.3
Lsat_1_v5_gn_5_181161 Lactuca sativa HOM05D006027 ORTHO05D007604 3.6e-60 235.3 187 64.2
Psat6g062520 Pisum sativum HOM05D006027 ORTHO05D007604 4.8e-60 235.0 186 69.9
Oeu015437.1 Olea europaea HOM05D006027 ORTHO05D007604 8.1e-60 234.2 160 75.0
HanXRQChr01g0014971 Helianthus annuus HOM05D006027 ORTHO05D007604 2.4e-59 232.6 188 65.4
MBI07_g08912_MAGBIO Magnolia biondii HOM05D006027 ORTHO05D007604 4.0e-59 231.9 185 67.0
CDE02G4364 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 9.0e-59 230.7 184 66.8
Rhsim01G0260300 Rhododendron simsii HOM05D006027 ORTHO05D007604 1.2e-58 230.3 158 74.7
A03p58340 Brassica napus HOM05D006027 ORTHO05D007604 3.4e-58 228.8 185 62.2
VMungo1383G1953 Vigna mungo HOM05D006027 ORTHO05D007604 3.4e-58 228.8 183 65.6
Phvul.001G165200 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 1.3e-57 226.9 183 65.0
Sed0007731 Sechium edule HOM05D006027 ORTHO05D007604 1.3e-57 226.9 148 76.4
BcaC06g32609 Brassica carinata HOM05D006027 ORTHO05D007604 1.7e-57 226.5 173 64.7
Oeu052083.1 Olea europaea HOM05D006027 ORTHO05D007604 1.7e-57 226.5 149 77.9
AUR62025437 Chenopodium quinoa HOM05D006027 ORTHO05D007604 2.9e-57 225.7 189 65.1
CiPaw.03G271300 Carya illinoinensis HOM05D006027 ORTHO05D007604 6.4e-57 224.6 184 66.8
Os01g0938100 Oryza sativa ssp. japonica HOM05D006027 ORTHO05D007604 8.4e-57 224.2 183 66.1
C07p56360 Brassica napus HOM05D006027 ORTHO05D007604 1.4e-56 223.4 185 61.1
BolC7t46115H Brassica oleracea HOM05D006027 ORTHO05D007604 1.4e-56 223.4 185 61.1
A01p09280 Brassica napus HOM05D006027 ORTHO05D007604 3.2e-56 222.2 185 59.5
Hund18287 Selenicereus undatus HOM05D006027 ORTHO05D007604 3.2e-56 222.2 186 64.0
C01p10860 Brassica napus HOM05D006027 ORTHO05D007604 5.4e-56 221.5 185 59.5
BcaNung04696 Brassica carinata HOM05D006027 ORTHO05D007604 7.1e-56 221.1 185 60.0
BraA01t00872Z Brassica rapa HOM05D006027 ORTHO05D007604 7.1e-56 221.1 158 66.5
Sp7g26630 Schrenkiella parvula HOM05D006027 ORTHO05D007604 7.1e-56 221.1 187 62.0
COL.COLO4_10205 Corchorus olitorius HOM05D006027 ORTHO05D007604 9.3e-56 220.7 114 91.2
Peaxi162Scf00043g00255 Petunia axillaris HOM05D006027 ORTHO05D007604 1.2e-55 220.3 116 89.7
THA.LOC104814531 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 1.2e-55 220.3 185 60.5
Aa31LG2G21720 Aethionema arabicum HOM05D006027 ORTHO05D007604 2.7e-55 219.2 185 61.6
CARHR236440 Cardamine hirsuta HOM05D006027 ORTHO05D007604 4.6e-55 218.4 181 61.3
Thhalv10026347m.g Eutrema salsugineum HOM05D006027 ORTHO05D007604 7.9e-55 217.6 185 60.5
AT4G28660 Arabidopsis thaliana HOM05D006027 ORTHO05D007604 1.0e-54 217.2 184 60.9
BolC1t01050H Brassica oleracea HOM05D000022 ORTHO05D000744 3.0e-54 215.7 178 60.7
Sc05g0002880 Simmondsia chinensis HOM05D006027 ORTHO05D007604 3.0e-54 215.7 171 67.8
EL10Ac7g17691 Beta vulgaris HOM05D006027 ORTHO05D007604 3.9e-54 215.3 205 58.0
SalBow4G0311 Salvia bowleyana HOM05D006027 ORTHO05D007604 3.9e-54 215.3 116 88.8
Cpa.g.sc87.33 Carica papaya HOM05D006027 ORTHO05D007604 6.6e-54 214.5 115 87.0
Zm00001eb141870 Zea mays HOM05D006027 ORTHO05D007604 1.1e-53 213.8 185 63.2
THA.LOC104820068 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 1.5e-53 213.4 188 62.2
AL7G23880 Arabidopsis lyrata HOM05D006027 ORTHO05D007604 1.9e-53 213.0 184 59.8
Carub.0007s1200 Capsella rubella HOM05D006027 ORTHO05D007604 2.5e-53 212.6 185 59.5
AUR62008802 Chenopodium quinoa HOM05D006027 ORTHO05D007604 4.3e-53 211.8 120 82.5
ECA248G3782 Erigeron canadensis HOM05D006027 ORTHO05D007604 7.3e-53 211.1 159 65.4
Zm00001eb141830 Zea mays HOM05D006027 ORTHO05D007604 6.2e-52 208.0 125 80.0
unitig_8.g3074 Utricularia gibba HOM05D006027 ORTHO05D007604 2.6e-50 202.6 191 58.1
ATR0787G157 Amborella trichopoda HOM05D006027 ORTHO05D007604 4.9e-49 198.4 115 80.9
HPP92_027289 Vanilla planifolia HOM05D006027 ORTHO05D007604 1.1e-48 197.2 157 63.1
HPP92_008468 Vanilla planifolia HOM05D006027 ORTHO05D007604 2.4e-48 196.1 188 56.4
Pp3c7_5450 Physcomitrium patens HOM05D006027 ORTHO05D007604 8.1e-44 181.0 124 68.5
Mapoly0042s0085 Marchantia polymorpha HOM05D006027 ORTHO05D007604 2.4e-43 179.5 171 57.3
SMO347G0509 Selaginella moellendorffii HOM05D006027 ORTHO05D007604 7.6e-42 174.5 115 73.0
Pp3c11_18280 Physcomitrium patens HOM05D006027 ORTHO05D007604 6.5e-41 171.4 122 64.8
AagrBONN_evm.TU.Sc2ySwM_340.224 Anthoceros agrestis HOM05D006027 ORTHO05D007604 3.2e-40 169.1 108 71.3
Ah.15g092630 Amaranthus hybridus HOM05D006027 ORTHO05D007604 6.2e-36 154.8 115 69.6
CBR_g12742 Chara braunii HOM05D006027 ORTHO05D007604 1.1e-35 154.1 110 61.8
MCO16G336 Micromonas commoda HOM05D006027 ORTHO05D007604 1.1e-35 154.1 117 58.1
Cre10.g440450 Chlamydomonas reinhardtii HOM05D006027 ORTHO05D007604 2.6e-34 149.4 108 63.0
PRCOL_00005949 Prasinoderma coloniale HOM05D006027 ORTHO05D007604 2.6e-34 149.4 106 62.3
RcHm_v2.0_Chr6g0286561 Rosa chinensis HOM05D006027 ORTHO05D007604 4.1e-27 125.6 108 65.7
CSS0017427 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 8.5e-25 117.9 176 44.9
Zm00001eb141750 Zea mays HOM05D006027 ORTHO05D007604 3.0e-22 109.4 59 84.7
Zm00001eb141790 Zea mays HOM05D006027 ORTHO05D007604 3.0e-22 109.4 59 84.7
TAR362G0025 Trochodendron aralioides HOM05D006027 ORTHO05D007604 6.9e-19 98.2 57 80.7
Zm00001eb141760 Zea mays HOM05D006027 ORTHO05D007604 2.1e-15 86.7 66 68.2
CDE09G0356 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 2.7e-15 86.3 109 48.6


User provided reference genes

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