Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_24706 Corylus avellana HOM05D007042 ORTHO05D008441 5.0e-105 384.4 191 100.0
Cfa002484 Carpinus fangiana HOM05D007042 ORTHO05D008441 7.5e-93 344.0 172 97.7
CiPaw.04G190700 Carya illinoinensis HOM05D007042 ORTHO05D008441 1.1e-83 313.5 192 81.8
CiPaw.03G270900 Carya illinoinensis HOM05D007042 ORTHO05D008441 2.1e-82 309.3 185 82.2
Dinv16402 Davidia involucrata HOM05D007042 ORTHO05D008441 6.0e-74 281.2 186 74.7
GSVIVG01028431001 Vitis vinifera HOM05D007042 ORTHO05D008441 2.3e-73 279.3 192 71.9
Manes.12G044501 Manihot esculenta HOM05D007042 ORTHO05D008441 1.5e-72 276.6 192 71.4
TAR633G0993 Trochodendron aralioides HOM05D007042 ORTHO05D008441 1.5e-72 276.6 191 70.2
Potri.002G256700 Populus trichocarpa HOM05D007042 ORTHO05D008441 4.3e-72 275.0 193 71.5
Dinv43069 Davidia involucrata HOM05D007042 ORTHO05D008441 7.3e-72 274.2 193 72.0
Prupe.8G215500 Prunus persica HOM05D007042 ORTHO05D008441 1.3e-71 273.5 192 72.4
Thecc.01G250400 Theobroma cacao HOM05D007042 ORTHO05D008441 1.6e-71 273.1 186 70.4
Atru.chr5.1857 Acer truncatum HOM05D007042 ORTHO05D008441 4.8e-71 271.6 192 71.9
CSS0015019 Camellia sinensis var. sinensis HOM05D007042 ORTHO05D008441 1.1e-70 270.4 184 71.2
Ciclev10022455m.g Citrus clementina HOM05D007042 ORTHO05D008441 2.4e-70 269.2 185 73.0
Gorai.001G181700 Gossypium raimondii HOM05D007042 ORTHO05D008441 4.0e-70 268.5 192 67.2
Nn1g02976 Nelumbo nucifera HOM05D007042 ORTHO05D008441 6.9e-70 267.7 187 70.6
Gohir.A07G152300 Gossypium hirsutum HOM05D007042 ORTHO05D008441 9.0e-70 267.3 192 66.7
Cpa.g.sc87.28 Carica papaya HOM05D007042 ORTHO05D008441 5.8e-69 264.6 184 70.1
Duzib133G0775 Durio zibethinus HOM05D007042 ORTHO05D008441 5.8e-69 264.6 191 68.1
Gohir.D07G158500 Gossypium hirsutum HOM05D007042 ORTHO05D008441 5.8e-69 264.6 192 66.1
Sed0010391 Sechium edule HOM05D007042 ORTHO05D008441 9.9e-69 263.8 185 69.2
arahy.Tifrunner.gnm1.ann1.UI445S Arachis hypogaea HOM05D007042 ORTHO05D008441 1.7e-68 263.1 192 67.7
arahy.Tifrunner.gnm1.ann1.T4WIMW Arachis hypogaea HOM05D007042 ORTHO05D008441 2.9e-68 262.3 192 67.2
QL09p041460 Quercus lobata HOM05D007042 ORTHO05D008441 4.9e-68 261.5 297 52.9
TWI18G1052 Tripterygium wilfordii HOM05D007042 ORTHO05D008441 6.4e-68 261.2 192 66.7
Eucgr.H04779 Eucalyptus grandis HOM05D007042 ORTHO05D008441 1.9e-67 259.6 192 67.7
Hma1.2p1_2139F.1_g314960 Hydrangea macrophylla HOM05D007042 ORTHO05D008441 1.9e-67 259.6 191 67.0
MD10G1176500 Malus domestica HOM05D007042 ORTHO05D008441 1.2e-66 256.9 192 67.2
Glyma.19G168400 Glycine max HOM05D007042 ORTHO05D008441 1.6e-66 256.5 190 65.8
vmacro14796 Vaccinium macrocarpon HOM05D007042 ORTHO05D008441 4.6e-66 255.0 191 65.4
MD05G1188900 Malus domestica HOM05D007042 ORTHO05D008441 1.3e-65 253.4 191 67.5
Lj1g0019034 Lotus japonicus HOM05D007042 ORTHO05D008441 1.8e-65 253.1 189 67.7
Actinidia09516 Actinidia chinensis HOM05D007042 ORTHO05D008441 6.7e-65 251.1 186 68.3
CsaV3_6G007350 Cucumis sativus L. HOM05D007042 ORTHO05D008441 6.7e-65 251.1 187 67.4
Lj1A74G98 Lonicera japonica HOM05D007042 ORTHO05D008441 8.7e-65 250.8 192 65.1
Oeu048243.1 Olea europaea HOM05D007042 ORTHO05D008441 8.7e-65 250.8 184 66.3
Glyma.03G167300 Glycine max HOM05D007042 ORTHO05D008441 3.3e-64 248.8 190 65.8
Cc02_g07760 Coffea canephora HOM05D007042 ORTHO05D008441 7.4e-64 247.7 199 65.3
Phvul.001G164800 Phaseolus vulgaris HOM05D007042 ORTHO05D008441 7.4e-64 247.7 186 66.1
RcHm_v2.0_Chr6g0286631 Rosa chinensis HOM05D007042 ORTHO05D008441 7.4e-64 247.7 198 64.6
MELO3C022392.2 Cucumis melo HOM05D007042 ORTHO05D008441 9.6e-64 247.3 187 66.3
Solyc04g011530.3 Solanum lycopersicum HOM05D007042 ORTHO05D008441 9.6e-64 247.3 185 65.9
CAN.G786.8 Capsicum annuum HOM05D007042 ORTHO05D008441 1.3e-63 246.9 186 66.1
Psat3g054000 Pisum sativum HOM05D007042 ORTHO05D008441 2.8e-63 245.7 190 65.8
Sopen04g005710 Solanum pennellii HOM05D007042 ORTHO05D008441 2.8e-63 245.7 185 65.4
Nitab4.5_0010166g0010 Nicotiana tabacum HOM05D007042 ORTHO05D008441 6.2e-63 244.6 192 64.1
VMungo1383G0900 Vigna mungo HOM05D007042 ORTHO05D008441 1.1e-62 243.8 186 64.5
Nitab4.5_0013552g0010 Nicotiana tabacum HOM05D007042 ORTHO05D008441 1.8e-62 243.0 192 64.1
ClCG06G001410 Citrullus lanatus HOM05D007042 ORTHO05D008441 6.9e-62 241.1 185 65.9
Medtr7g098470 Medicago truncatula HOM05D007042 ORTHO05D008441 6.9e-62 241.1 190 65.3
PGSC0003DMG400027743 Solanum tuberosum HOM05D007042 ORTHO05D008441 9.0e-62 240.7 184 65.8
Aqoxy5G00144 Aquilegia oxysepala HOM05D007042 ORTHO05D008441 5.8e-61 238.0 188 63.3
HanXRQChr15g0468211 Helianthus annuus HOM05D007042 ORTHO05D008441 7.6e-61 237.7 191 62.8
AUR62025440 Chenopodium quinoa HOM05D007042 ORTHO05D008441 1.7e-60 236.5 189 62.4
Migut.F00782 Erythranthe guttata HOM05D007042 ORTHO05D008441 4.9e-60 235.0 188 60.6
Lsat_1_v5_gn_9_11480 Lactuca sativa HOM05D007042 ORTHO05D008441 4.9e-60 235.0 196 61.7
FvH4_2g20510 Fragaria vesca HOM05D007042 ORTHO05D008441 8.4e-60 234.2 198 61.6
Ca_08743_v3 Cicer arietinum L. HOM05D007042 ORTHO05D008441 1.1e-59 233.8 190 62.1
SalBow3G0444 Salvia bowleyana HOM05D007042 ORTHO05D008441 1.4e-59 233.4 194 59.8
THA.LOC104814528 Tarenaya hassleriana HOM05D007042 ORTHO05D008441 1.4e-59 233.4 189 61.9
Lalb_Chr20g0113621 Lupinus albus HOM05D007042 ORTHO05D008441 4.2e-59 231.9 186 63.4
BcaC06g36726 Brassica carinata HOM05D007042 ORTHO05D008441 5.5e-59 231.5 187 62.6
C07p00700 Brassica napus HOM05D007042 ORTHO05D008441 5.5e-59 231.5 187 62.6
BolC7t40512H Brassica oleracea HOM05D007042 ORTHO05D008441 5.5e-59 231.5 187 62.6
PGR031G2106 Punica granatum HOM05D007042 ORTHO05D008441 7.1e-59 231.1 182 64.3
Peaxi162Scf00760g00324 Petunia axillaris HOM05D007042 ORTHO05D008441 9.3e-59 230.7 154 71.4
A07p00340 Brassica napus HOM05D007042 ORTHO05D008441 1.2e-58 230.3 192 60.9
Sp3g33630 Schrenkiella parvula HOM05D007042 ORTHO05D008441 2.1e-58 229.6 191 62.8
Rhsim01G0260600 Rhododendron simsii HOM05D007042 ORTHO05D008441 2.7e-58 229.2 164 66.5
BcaB03g16831 Brassica carinata HOM05D007042 ORTHO05D008441 3.5e-58 228.8 192 62.0
ECA247G0849 Erigeron canadensis HOM05D007042 ORTHO05D008441 3.5e-58 228.8 193 63.7
CDE06G0115 Ceratophyllum demersum HOM05D007042 ORTHO05D008441 4.6e-58 228.4 184 63.6
CARHR110910 Cardamine hirsuta HOM05D007042 ORTHO05D008441 1.0e-57 227.3 190 61.1
EL10Ac7g17687 Beta vulgaris HOM05D007042 ORTHO05D008441 1.3e-57 226.9 177 62.1
Thhalv10002102m.g Eutrema salsugineum HOM05D007042 ORTHO05D008441 6.7e-57 224.6 185 62.2
BraA07t27825Z Brassica rapa HOM05D007042 ORTHO05D008441 1.1e-56 223.8 173 63.6
Carub.0003s3477 Capsella rubella HOM05D007042 ORTHO05D008441 2.5e-56 222.6 193 60.1
FAN24G0975 Fragaria x ananassa HOM05D003075 ORTHO05D003430 3.3e-56 222.2 178 62.4
Actinidia27524 Actinidia chinensis HOM05D007042 ORTHO05D008441 9.6e-56 220.7 192 62.5
AUR62008799 Chenopodium quinoa HOM05D007042 ORTHO05D008441 9.6e-56 220.7 169 62.7
FAN15G2210 Fragaria x ananassa HOM05D007042 ORTHO05D008441 2.1e-55 219.5 178 61.8
Aa31LG8G17370 Aethionema arabicum HOM05D007042 ORTHO05D008441 2.8e-55 219.2 193 58.5
ATR0787G115 Amborella trichopoda HOM05D007042 ORTHO05D008441 3.7e-55 218.8 167 61.1
SGA_v2.0_scaffold94G28473 Striga asiatica HOM05D007042 ORTHO05D008441 3.7e-55 218.8 192 58.3
AL3G53360 Arabidopsis lyrata HOM05D007042 ORTHO05D008441 1.4e-54 216.9 172 63.4
AT2G20390 Arabidopsis thaliana HOM05D007042 ORTHO05D008441 3.1e-54 215.7 191 58.6
Hund05486 Selenicereus undatus HOM05D000914 ORTHO05D000718 3.4e-53 212.2 177 55.9
SHI26738 Sapria himalayana HOM05D007042 ORTHO05D008441 5.8e-53 211.5 184 58.2
FAN27G0500 Fragaria x ananassa HOM05D007042 ORTHO05D008441 1.3e-52 210.3 162 64.2
Sc17g0002810 Simmondsia chinensis HOM05D007042 ORTHO05D008441 2.9e-52 209.1 172 59.3
PSO170G0149 Papaver somniferum HOM05D007042 ORTHO05D008441 1.1e-51 207.2 203 55.2
PSO063G2627 Papaver somniferum HOM05D007042 ORTHO05D008441 1.8e-49 199.9 201 54.2
Actinidia23697 Actinidia chinensis HOM05D007042 ORTHO05D008441 5.1e-49 198.4 188 57.4
Sabra02G0195200 Salix brachista HOM05D007042 ORTHO05D008441 2.8e-47 192.6 127 77.2
HPP92_014817 Vanilla planifolia HOM05D007042 ORTHO05D008441 5.3e-46 188.3 195 49.2
Zm00001eb088930 Zea mays HOM05D007042 ORTHO05D008441 1.7e-44 183.3 180 51.7
TPR.G20062 Trifolium pratense HOM05D007042 ORTHO05D008441 9.3e-43 177.6 127 70.1
Os04g0129600 Oryza sativa ssp. japonica HOM05D007042 ORTHO05D008441 4.3e-40 168.7 124 62.9
COL.COLO4_03573 Corchorus olitorius HOM05D007042 ORTHO05D008441 6.3e-39 164.9 108 76.9
FAN27G0749 Fragaria x ananassa HOM05D003075 ORTHO05D003430 3.8e-36 155.6 110 67.3
Zm00001eb307520 Zea mays HOM05D007042 ORTHO05D008441 3.2e-35 152.5 142 50.0
SEGI_30132 Sequoiadendron giganteum HOM05D007042 ORTHO05D008441 9.4e-35 151.0 186 44.1
SHI06358 Sapria himalayana HOM05D007042 ORTHO05D008441 3.9e-33 145.6 116 57.8
CDE04G2760 Ceratophyllum demersum HOM05D007042 ORTHO05D008441 3.3e-32 142.5 92 69.6
Os02g0754800 Oryza sativa ssp. japonica HOM05D007042 ORTHO05D008441 2.0e-29 133.3 100 61.0
AagrBONN_evm.TU.Sc2ySwM_228.1144 Anthoceros agrestis HOM05D007042 ORTHO05D008441 2.3e-25 119.8 141 44.7
TPR.G20307 Trifolium pratense HOM05D007042 ORTHO05D008441 1.2e-21 107.5 80 63.8
SEGI_30900 Sequoiadendron giganteum HOM05D007042 ORTHO05D008441 2.0e-21 106.7 101 45.5
SMO116G0088 Selaginella moellendorffii HOM05D001526 ORTHO05D008441 4.7e-18 95.5 131 38.2
Mapoly0078s0039 Marchantia polymorpha HOM05D007042 ORTHO05D008441 5.7e-16 88.6 120 41.7
Potri.014G193150 Populus trichocarpa HOM05D007042 ORTHO05D008441 1.2e-13 80.9 64 70.3
Pp3c18_10950 Physcomitrium patens HOM05D007042 ORTHO05D008441 3.8e-12 75.9 129 34.1
EL10As2g23173 Beta vulgaris HOM05D007042 ORTHO05D008441 2.0e-08 63.5 50 52.0
Cre13.g604300 Chlamydomonas reinhardtii HOM05D007042 ORTHO05D008441 4.4e-08 62.4 98 32.7


User provided reference genes

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