Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_24648 Corylus avellana HOM05D006747 ORTHO05D008384 2.8e-158 562.0 304 100.0
Cfa002442 Carpinus fangiana HOM05D006747 ORTHO05D008384 5.9e-132 474.6 304 84.2
CiPaw.03G265900 Carya illinoinensis HOM05D006747 ORTHO05D008384 4.7e-113 411.8 318 70.4
GSVIVG01028355001 Vitis vinifera HOM05D006747 ORTHO05D008384 1.8e-109 399.8 304 70.7
Atru.chr5.1716 Acer truncatum HOM05D006747 ORTHO05D008384 1.7e-107 393.3 304 68.1
Dinv22393 Davidia involucrata HOM05D006747 ORTHO05D008384 8.6e-107 391.0 299 69.9
Ciclev10021655m.g Citrus clementina HOM05D006747 ORTHO05D008384 7.2e-106 387.9 274 72.3
MD05G1195200 Malus domestica HOM05D006747 ORTHO05D008384 2.1e-105 386.3 297 69.7
Duzib138G0743 Durio zibethinus HOM05D006747 ORTHO05D008384 8.0e-105 384.4 295 69.8
Thecc.01G256100 Theobroma cacao HOM05D006747 ORTHO05D008384 1.0e-104 384.0 295 67.8
FAN27G0389 Fragaria x ananassa HOM05D006747 ORTHO05D008384 1.4e-104 383.6 298 70.1
Glyma.06G315300 Glycine max HOM05D006747 ORTHO05D008384 1.8e-104 383.3 304 67.4
Gorai.007G147500 Gossypium raimondii HOM05D006747 ORTHO05D008384 2.3e-104 382.9 276 71.0
Potri.005G225900 Populus trichocarpa HOM05D006747 ORTHO05D008384 2.3e-104 382.9 274 72.6
RcHm_v2.0_Chr6g0287851 Rosa chinensis HOM05D006747 ORTHO05D008384 2.3e-104 382.9 298 70.1
FAN20G2892 Fragaria x ananassa HOM05D006747 ORTHO05D008384 4.0e-104 382.1 301 73.1
FAN15G1911 Fragaria x ananassa HOM05D006747 ORTHO05D008384 6.8e-104 381.3 298 69.8
Gohir.D11G137550 Gossypium hirsutum HOM05D006747 ORTHO05D008384 6.8e-104 381.3 276 70.3
CANSAT01G1212 Cannabis sativa HOM05D006747 ORTHO05D008384 8.9e-104 380.9 302 66.2
Gohir.A11G131500 Gossypium hirsutum HOM05D006747 ORTHO05D008384 2.0e-103 379.8 276 70.7
TAR362G0605 Trochodendron aralioides HOM05D006747 ORTHO05D008384 2.0e-103 379.8 298 68.1
Lj5g0027576 Lotus japonicus HOM05D006747 ORTHO05D008384 3.4e-103 379.0 304 65.8
Sabra05G0174300 Salix brachista HOM05D006747 ORTHO05D008384 7.5e-103 377.9 310 70.0
Cc01_g18210 Coffea canephora HOM05D006747 ORTHO05D008384 1.7e-102 376.7 304 66.4
Actinidia30159 Actinidia chinensis HOM05D006747 ORTHO05D008384 2.8e-102 375.9 298 67.8
COL.COLO4_04026 Corchorus olitorius HOM05D006747 ORTHO05D008384 1.8e-101 373.2 328 62.8
AL3G53500 Arabidopsis lyrata HOM05D006747 ORTHO05D008384 3.2e-101 372.5 274 68.6
Phvul.007G192000 Phaseolus vulgaris HOM05D006747 ORTHO05D008384 4.1e-101 372.1 304 65.8
Solyc06g008350.3 Solanum lycopersicum HOM05D006747 ORTHO05D008384 7.0e-101 371.3 296 66.2
Sp3g33710 Schrenkiella parvula HOM05D006747 ORTHO05D008384 1.6e-100 370.2 274 67.9
Sopen06g003200 Solanum pennellii HOM05D006747 ORTHO05D008384 2.0e-100 369.8 296 65.9
Carub.0003s3494 Capsella rubella HOM05D006747 ORTHO05D008384 2.7e-100 369.4 278 66.9
Eucgr.B01566 Eucalyptus grandis HOM05D006747 ORTHO05D008384 3.5e-100 369.0 269 70.3
AT2G20495 Arabidopsis thaliana HOM05D006747 ORTHO05D008384 5.9e-100 368.2 278 67.3
Migut.D00438 Erythranthe guttata HOM05D006747 ORTHO05D008384 7.8e-100 367.9 268 69.4
CSS0000886 Camellia sinensis var. sinensis HOM05D006747 ORTHO05D008384 1.0e-99 367.5 286 67.5
VMungo0720G1324 Vigna mungo HOM05D006747 ORTHO05D008384 1.3e-99 367.1 304 64.5
TPR.G35130 Trifolium pratense HOM05D006747 ORTHO05D008384 1.7e-99 366.7 304 63.8
Peaxi162Scf00987g00036 Petunia axillaris HOM05D006747 ORTHO05D008384 2.3e-99 366.3 271 69.4
Lalb_Chr06g0170541 Lupinus albus HOM05D006747 ORTHO05D008384 2.9e-99 365.9 304 64.5
Rhsim13G0036000 Rhododendron simsii HOM05D006747 ORTHO05D008384 2.9e-99 365.9 278 68.3
PGSC0003DMG400025504 Solanum tuberosum HOM05D006747 ORTHO05D008384 5.0e-99 365.2 296 64.9
Aa31LG8G17440 Aethionema arabicum HOM05D006747 ORTHO05D008384 6.6e-99 364.8 267 68.9
Thhalv10002060m.g Eutrema salsugineum HOM05D006747 ORTHO05D008384 6.6e-99 364.8 271 67.9
Psat6g054040 Pisum sativum HOM05D006747 ORTHO05D008384 1.9e-98 363.2 305 63.3
CARHR111050 Cardamine hirsuta HOM05D006747 ORTHO05D008384 4.3e-98 362.1 277 66.1
arahy.Tifrunner.gnm1.ann1.0525TE Arachis hypogaea HOM05D006747 ORTHO05D008384 9.5e-98 360.9 304 62.8
arahy.Tifrunner.gnm1.ann1.EQ4JVG Arachis hypogaea HOM05D006747 ORTHO05D008384 9.5e-98 360.9 304 62.8
BraA07t27816Z Brassica rapa HOM05D006747 ORTHO05D008384 1.6e-97 360.1 274 66.4
Manes.12G033600 Manihot esculenta HOM05D006747 ORTHO05D008384 6.1e-97 358.2 258 72.5
Lsat_1_v5_gn_5_182940 Lactuca sativa HOM05D006747 ORTHO05D008384 1.4e-96 357.1 302 62.6
SalBow4G0984 Salvia bowleyana HOM05D006747 ORTHO05D008384 1.8e-96 356.7 304 61.8
BcaC06g36739 Brassica carinata HOM05D006747 ORTHO05D008384 5.2e-96 355.1 274 65.3
BcaB03g16845 Brassica carinata HOM05D006747 ORTHO05D008384 6.8e-96 354.8 301 62.8
Aqoxy2G03665 Aquilegia oxysepala HOM05D006747 ORTHO05D008384 2.0e-95 353.2 310 64.8
Medtr1g069790 Medicago truncatula HOM05D006747 ORTHO05D008384 2.0e-95 353.2 304 61.5
MSTRG.21486 Avicennia marina HOM05D006747 ORTHO05D008384 5.8e-95 351.7 299 66.9
THA.LOC104804045 Tarenaya hassleriana HOM05D006747 ORTHO05D008384 5.8e-95 351.7 305 61.0
EL10As5g23483 Beta vulgaris HOM05D006747 ORTHO05D008384 9.8e-95 350.9 268 66.0
C07p00520 Brassica napus HOM05D006747 ORTHO05D008384 1.3e-94 350.5 273 65.2
BolC7t40498H Brassica oleracea HOM05D006747 ORTHO05D008384 1.3e-94 350.5 275 65.1
HanXRQChr09g0254271 Helianthus annuus HOM05D006747 ORTHO05D008384 2.9e-94 349.4 270 67.4
PSO063G2179 Papaver somniferum HOM05D006747 ORTHO05D008384 2.9e-94 349.4 307 61.2
MBI07_g16913_MAGBIO Magnolia biondii HOM05D006747 ORTHO05D008384 1.1e-93 347.4 300 62.0
vmacro02672 Vaccinium macrocarpon HOM05D006747 ORTHO05D008384 1.4e-93 347.1 358 55.9
ATR0736G001 Amborella trichopoda HOM05D006747 ORTHO05D008384 1.2e-92 344.0 274 63.9
CsaV3_7G027040 Cucumis sativus L. HOM05D006747 ORTHO05D008384 1.0e-91 340.9 268 64.2
SGA_v2.0_scaffold138G35213 Striga asiatica HOM05D006747 ORTHO05D008384 1.3e-91 340.5 314 59.6
FAN24G2059 Fragaria x ananassa HOM05D006747 ORTHO05D008384 1.7e-91 340.1 299 67.6
Lj1C68G8 Lonicera japonica HOM05D003718 ORTHO05D004402 2.3e-91 339.7 212 79.7
DCAR_012556 Daucus carota HOM05D006747 ORTHO05D008384 5.0e-91 338.6 273 63.0
Sc17g0000600 Simmondsia chinensis HOM05D006747 ORTHO05D008384 1.1e-90 337.4 212 77.8
AUR62011854 Chenopodium quinoa HOM05D006747 ORTHO05D008384 1.9e-90 336.7 276 61.6
Os07g0458800 Oryza sativa ssp. japonica HOM05D006747 ORTHO05D008384 1.9e-90 336.7 272 63.2
MELO3C012750.2 Cucumis melo HOM05D006747 ORTHO05D008384 3.3e-90 335.9 268 63.1
PGR031G3840 Punica granatum HOM05D006747 ORTHO05D008384 4.3e-90 335.5 253 68.0
CDE06G1525 Ceratophyllum demersum HOM05D006747 ORTHO05D008384 2.1e-89 333.2 276 64.1
Prupe.8G221800 Prunus persica HOM05D006747 ORTHO05D008384 1.1e-88 330.9 305 61.6
AUR62024699 Chenopodium quinoa HOM05D006747 ORTHO05D008384 2.2e-86 323.2 212 71.7
CAN.G941.16 Capsicum annuum HOM05D006747 ORTHO05D008384 3.2e-85 319.3 209 75.6
unitig_8.g3882 Utricularia gibba HOM05D006747 ORTHO05D008384 3.5e-84 315.8 303 56.4
Zm00001eb384950 Zea mays HOM05D006747 ORTHO05D008384 3.3e-82 309.3 271 58.3
A07p00240 Brassica napus HOM05D006747 ORTHO05D008384 1.2e-81 307.4 274 60.2
HPP92_014756 Vanilla planifolia HOM05D006747 ORTHO05D008384 3.6e-81 305.8 212 69.8
Nn1g02801 Nelumbo nucifera HOM05D006747 ORTHO05D008384 4.4e-79 298.9 274 60.6
Hma1.2p1_0273F.1_g109550 Hydrangea macrophylla HOM05D006747 ORTHO05D008384 4.1e-77 292.4 220 69.5
ECA248G1486 Erigeron canadensis HOM05D006747 ORTHO05D008384 2.1e-73 280.0 273 56.8
ClCG09G008030 Citrullus lanatus HOM05D006747 ORTHO05D008384 6.8e-72 275.0 446 39.5
Nitab4.5_0005593g0070 Nicotiana tabacum HOM05D006747 ORTHO05D008384 2.9e-70 269.6 212 66.0
PSO017G5775 Papaver somniferum HOM05D006747 ORTHO05D008384 3.8e-70 269.2 307 51.8
Oeu035736.1 Olea europaea HOM05D006747 ORTHO05D008384 9.3e-69 264.6 207 65.7
AagrBONN_evm.TU.Sc2ySwM_228.388 Anthoceros agrestis HOM05D006747 ORTHO05D008384 8.7e-67 258.1 277 49.5
QL09p039580 Quercus lobata HOM05D006747 ORTHO05D008384 9.9e-63 244.6 217 64.5
Pp3c11_10320 Physcomitrium patens HOM05D006747 ORTHO05D008384 3.8e-62 242.7 271 47.2
Mapoly0024s0028 Marchantia polymorpha HOM05D006747 ORTHO05D008384 2.4e-61 240.0 263 49.0
Nitab4.5_0000326g0130 Nicotiana tabacum HOM05D006747 ORTHO05D008384 7.1e-61 238.4 273 53.1
HPP92_028089 Vanilla planifolia HOM05D006747 ORTHO05D008384 1.2e-60 237.7 202 60.4
Sed0026822 Sechium edule HOM05D006747 ORTHO05D008384 2.3e-51 206.8 218 53.7
SMO115G0001 Selaginella moellendorffii HOM05D006747 ORTHO05D008384 2.3e-51 206.8 260 44.2
FvH4_2g21270 Fragaria vesca HOM05D006747 ORTHO05D008384 5.3e-48 195.7 185 65.4
Ca_09674_v3 Cicer arietinum L. HOM05D006747 ORTHO05D008384 3.4e-47 193.0 207 52.7
QL09p039572 Quercus lobata HOM05D006747 ORTHO05D008384 1.1e-40 171.4 90 92.2
SEGI_35883 Sequoiadendron giganteum HOM05D006747 ORTHO05D008384 7.2e-29 132.1 89 68.5
CAN.G507.4 Capsicum annuum HOM05D006747 ORTHO05D008384 2.0e-23 114.0 73 69.9
Hma1.2p1_0273F.1_g109560 Hydrangea macrophylla HOM05D006747 ORTHO05D008384 5.9e-23 112.5 73 76.7
arahy.Tifrunner.gnm1.ann1.K1LLW7 Arachis hypogaea HOM05D006747 ORTHO05D008384 3.2e-21 106.7 59 86.4
SEGI_30594 Sequoiadendron giganteum HOM05D006747 ORTHO05D008384 1.6e-20 104.4 96 51.0
Actinidia34415 Actinidia chinensis HOM05D006747 ORTHO05D008384 3.1e-16 90.1 56 71.4
Actinidia34401 Actinidia chinensis HOM05D006747 ORTHO05D008384 1.0e-14 85.1 54 70.4
Cpa.g.sc165.14 Carica papaya HOM05D006747 ORTHO05D008384 1.3e-14 84.7 112 50.9
Gohir.A07G213740 Gossypium hirsutum HOM05D006747 ORTHO05D008384 1.3e-14 84.7 153 37.9
MD10G1182200 Malus domestica HOM05D006747 ORTHO05D008384 2.7e-12 77.0 59 66.1
Duzib133G0415 Durio zibethinus HOM05D006747 ORTHO05D008384 5.2e-11 72.8 49 67.3
SEGI_37670 Sequoiadendron giganteum HOM05D006747 ORTHO05D008384 1.7e-09 67.8 112 49.1
Gohir.A07G149550 Gossypium hirsutum HOM05D006747 ORTHO05D008384 1.8e-08 64.3 86 46.5
Cre07.g348951 Chlamydomonas reinhardtii HOM05D006747 ORTHO05D008384 2.0e-07 60.8 101 29.7
Actinidia07304 Actinidia chinensis HOM05D006747 ORTHO05D008384 1.7e-06 57.8 43 74.4
Actinidia23032 Actinidia chinensis HOM05D004842 ORTHO05D008384 1.7e-06 57.8 40 65.0


User provided reference genes

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