Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_24631 Corylus avellana HOM05D008367 ORTHO05D010529 5.7e-92 340.9 172 100.0
Cfa002424 Carpinus fangiana HOM05D008367 ORTHO05D010529 2.9e-83 312.0 174 92.0
QL09p038772 Quercus lobata HOM05D008367 ORTHO05D010529 1.2e-44 183.7 190 59.5
CiPaw.03G264200 Carya illinoinensis HOM05D008367 ORTHO05D010529 5.5e-42 174.9 193 57.5
Ciclev10022407m.g Citrus clementina HOM05D008367 ORTHO05D010529 2.8e-30 136.0 190 46.8
MD05G1197200 Malus domestica HOM05D008367 ORTHO05D010529 4.1e-29 132.1 188 48.4
Duzib138G1787 Durio zibethinus HOM05D008367 ORTHO05D010529 1.2e-28 130.6 197 43.7
Potri.002G038400 Populus trichocarpa HOM05D008367 ORTHO05D010529 4.5e-28 128.6 191 45.0
Duzib133G0413 Durio zibethinus HOM05D008367 ORTHO05D010529 1.7e-27 126.7 191 43.5
RcHm_v2.0_Chr6g0288121 Rosa chinensis HOM05D008367 ORTHO05D010529 2.2e-27 126.3 191 44.5
Lj1g0003464 Lotus japonicus HOM05D008367 ORTHO05D010529 1.9e-26 123.2 195 45.1
Medtr7g096950 Medicago truncatula HOM05D008367 ORTHO05D010529 1.9e-26 123.2 193 42.0
Potri.005G224200 Populus trichocarpa HOM05D008367 ORTHO05D010529 2.5e-26 122.9 190 43.2
Prupe.8G223700 Prunus persica HOM05D008367 ORTHO05D010529 4.6e-25 118.6 187 44.9
Sabra02G0030800 Salix brachista HOM05D008367 ORTHO05D010529 7.9e-25 117.9 191 42.4
Sabra05G0173000 Salix brachista HOM05D008367 ORTHO05D010529 1.0e-24 117.5 192 42.7
Ca_08676_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 1.8e-24 116.7 185 43.2
Cc01_g18350 Coffea canephora HOM05D008367 ORTHO05D010529 3.0e-24 115.9 203 39.4
Gohir.D07G155080 Gossypium hirsutum HOM05D008367 ORTHO05D010529 5.1e-24 115.2 182 42.3
Gorai.001G177400 Gossypium raimondii HOM05D008367 ORTHO05D010529 5.1e-24 115.2 182 42.3
Gohir.A07G148700 Gossypium hirsutum HOM05D008367 ORTHO05D010529 6.7e-24 114.8 186 42.5
Thecc.01G258200 Theobroma cacao HOM05D008367 ORTHO05D010529 6.7e-24 114.8 194 41.2
FAN27G3501 Fragaria x ananassa HOM05D004208 ORTHO05D005156 8.7e-24 114.4 195 41.5
Rhsim01G0263900 Rhododendron simsii HOM05D008367 ORTHO05D010529 1.1e-23 114.0 203 41.4
COL.COLO4_05894 Corchorus olitorius HOM05D008367 ORTHO05D010529 1.5e-23 113.6 190 42.6
Manes.13G034100 Manihot esculenta HOM05D008367 ORTHO05D010529 1.9e-23 113.2 187 42.8
Ca_08710_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 1.3e-22 110.5 185 42.7
FvH4_2g21490 Fragaria vesca HOM05D008367 ORTHO05D010529 1.3e-22 110.5 193 42.0
Cpa.g.sc165.10 Carica papaya HOM05D008367 ORTHO05D010529 2.8e-22 109.4 184 45.1
Psat3g056920 Pisum sativum HOM05D008367 ORTHO05D010529 2.8e-22 109.4 190 40.0
Ca_08702_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 4.8e-22 108.6 180 42.8
Glyma.03G163200 Glycine max HOM05D008367 ORTHO05D010529 4.8e-22 108.6 184 44.0
Actinidia25788 Actinidia chinensis HOM05D008367 ORTHO05D010529 6.3e-22 108.2 182 41.2
FAN20G2986 Fragaria x ananassa HOM05D004208 ORTHO05D005156 8.2e-22 107.8 191 41.4
Phvul.001G161100 Phaseolus vulgaris HOM05D008367 ORTHO05D010529 1.1e-21 107.5 173 45.7
Glyma.19G164700 Glycine max HOM05D008367 ORTHO05D010529 3.1e-21 105.9 178 44.4
Atru.chr5.1688 Acer truncatum HOM05D008367 ORTHO05D010529 2.6e-20 102.8 170 44.1
Actinidia09550 Actinidia chinensis HOM05D008367 ORTHO05D010529 4.5e-20 102.1 188 39.4
VMungo1383G3617 Vigna mungo HOM05D008367 ORTHO05D010529 4.5e-20 102.1 178 43.8
Hma1.2p1_0273F.1_g109700 Hydrangea macrophylla HOM05D008367 ORTHO05D010529 1.0e-19 100.9 200 37.5
FAN24G2300 Fragaria x ananassa HOM05D004208 ORTHO05D005156 2.9e-19 99.4 189 40.2
Eucgr.B01554 Eucalyptus grandis HOM05D008367 ORTHO05D010529 8.5e-19 97.8 177 39.5
CANSAT01G1417 Cannabis sativa HOM05D008367 ORTHO05D010529 1.1e-18 97.4 187 39.6
Rhsim13G0035000 Rhododendron simsii HOM05D008367 ORTHO05D010529 2.5e-18 96.3 190 37.9
Hma1.2p1_0576F.1_g182070 Hydrangea macrophylla HOM05D008367 ORTHO05D010529 1.6e-17 93.6 188 41.0
Oeu025845.1 Olea europaea HOM05D008367 ORTHO05D010529 1.6e-17 93.6 193 38.3
TAR365G0977 Trochodendron aralioides HOM05D007526 ORTHO05D009350 1.1e-15 87.4 172 40.1
THA.LOC104814518 Tarenaya hassleriana HOM05D013395 ORTHO05D015261 1.5e-15 87.0 167 38.9
CAN.G896.7 Capsicum annuum HOM05D008367 ORTHO05D010529 2.0e-15 86.7 193 37.8
Lalb_Chr01g0012251 Lupinus albus HOM05D008367 ORTHO05D010529 2.6e-15 86.3 194 37.6
Lsat_1_v5_gn_8_93101 Lactuca sativa HOM05D008367 ORTHO05D010529 5.7e-15 85.1 165 41.8
Actinidia27694 Actinidia chinensis HOM05D008367 ORTHO05D010529 2.2e-14 83.2 181 36.5
Atru.chr4.2058 Acer truncatum HOM05D007526 ORTHO05D009350 3.7e-14 82.4 167 35.9
Nitab4.5_0000470g0140 Nicotiana tabacum HOM05D008367 ORTHO05D010529 3.7e-14 82.4 195 33.3
Migut.N02203 Erythranthe guttata HOM05D008367 ORTHO05D010529 2.4e-13 79.7 200 36.0
Thecc.04G255400 Theobroma cacao HOM05D007526 ORTHO05D009350 4.1e-13 79.0 192 32.3
ECA236G2746 Erigeron canadensis HOM05D008367 ORTHO05D010529 6.9e-13 78.2 182 35.7
PGSC0003DMG400010298 Solanum tuberosum HOM05D008367 ORTHO05D010529 2.0e-12 76.6 180 34.4
Eucgr.H03043 Eucalyptus grandis HOM05D007526 ORTHO05D009350 5.9e-12 75.1 177 30.5
Aa31LG8G17450 Aethionema arabicum HOM05D013395 ORTHO05D015261 7.7e-12 74.7 168 38.7
Cfa022958 Carpinus fangiana HOM05D007526 ORTHO05D009350 1.3e-11 73.9 176 33.5
QL06p017957 Quercus lobata HOM05D007526 ORTHO05D009350 1.7e-11 73.6 181 34.8
Sopen09g028370 Solanum pennellii HOM05D008367 ORTHO05D010529 1.7e-11 73.6 180 36.1
TAR636G0759 Trochodendron aralioides HOM05D007526 ORTHO05D009350 2.9e-11 72.8 172 34.9
Nn3g19655 Nelumbo nucifera HOM05D007526 ORTHO05D009350 3.8e-11 72.4 219 33.3
Aqoxy5G00249 Aquilegia oxysepala HOM05D007526 ORTHO05D009350 5.0e-11 72.0 192 33.9
Haze_11381 Corylus avellana HOM05D007526 ORTHO05D009350 5.0e-11 72.0 171 31.0
Nn1g02762 Nelumbo nucifera HOM05D007526 ORTHO05D009350 5.0e-11 72.0 213 34.3
Gohir.D11G136600 Gossypium hirsutum HOM05D008367 ORTHO05D010529 8.5e-11 71.2 172 36.6
Cpa.g.sc44.57 Carica papaya HOM05D007526 ORTHO05D009350 1.9e-10 70.1 172 33.7
Gorai.007G146300 Gossypium raimondii HOM05D008367 ORTHO05D010529 1.9e-10 70.1 173 38.7
Dinv22407 Davidia involucrata HOM05D008367 ORTHO05D010529 2.5e-10 69.7 112 39.3
DCAR_007739 Daucus carota HOM05D008367 ORTHO05D010529 3.2e-10 69.3 114 41.2
Lj6g0011756 Lotus japonicus HOM05D007526 ORTHO05D009350 4.2e-10 68.9 163 31.9
Ciclev10005975m.g Citrus clementina HOM05D007526 ORTHO05D009350 9.4e-10 67.8 181 30.9
Glyma.10G181000 Glycine max HOM05D007526 ORTHO05D009350 9.4e-10 67.8 173 33.5
MBI07_g16245_MAGBIO Magnolia biondii HOM05D007526 ORTHO05D009350 1.2e-09 67.4 168 35.1
Duzib151G1045 Durio zibethinus HOM05D007526 ORTHO05D009350 1.6e-09 67.0 202 30.2
Prupe.1G039600 Prunus persica HOM05D007526 ORTHO05D009350 2.1e-09 66.6 211 31.8
RcHm_v2.0_Chr4g0393211 Rosa chinensis HOM05D007526 ORTHO05D009350 2.1e-09 66.6 180 31.7
CiPaw.01G184600 Carya illinoinensis HOM05D007526 ORTHO05D009350 2.7e-09 66.2 181 32.6
Duzib212G0007 Durio zibethinus HOM05D007526 ORTHO05D009350 3.6e-09 65.9 194 32.0
CSS0033898 Camellia sinensis var. sinensis HOM05D007526 ORTHO05D009350 4.7e-09 65.5 163 32.5
MD13G1214200 Malus domestica HOM05D007526 ORTHO05D009350 6.1e-09 65.1 193 29.0
Rhsim13G0034900 Rhododendron simsii HOM05D009321 ORTHO05D010529 6.1e-09 65.1 40 75.0
SGA_v2.0_scaffold80G25773 Striga asiatica HOM05D008367 ORTHO05D010529 1.0e-08 64.3 192 32.8
VMungo0720G1630 Vigna mungo HOM05D007526 ORTHO05D009350 1.4e-08 63.9 172 32.6
FvH4_4g03670 Fragaria vesca HOM05D007526 ORTHO05D009350 1.8e-08 63.5 174 32.2
FAN12G2381 Fragaria x ananassa HOM05D007526 ORTHO05D009350 2.3e-08 63.2 174 31.6
Glyma.20G209600 Glycine max HOM05D007526 ORTHO05D009350 3.0e-08 62.8 161 31.1
Gorai.006G253500 Gossypium raimondii HOM05D007526 ORTHO05D009350 3.0e-08 62.8 186 28.5
FAN17G0331 Fragaria x ananassa HOM05D007526 ORTHO05D009350 3.9e-08 62.4 175 29.1
TWI09G0237 Tripterygium wilfordii HOM05D007526 ORTHO05D009350 3.9e-08 62.4 169 27.2
Cc03_g05540 Coffea canephora HOM05D007526 ORTHO05D009350 5.2e-08 62.0 169 30.8
CsaV3_3G012050 Cucumis sativus L. HOM05D007526 ORTHO05D009350 6.7e-08 61.6 182 30.8
Rhsim04G0182300 Rhododendron simsii HOM05D007526 ORTHO05D009350 8.8e-08 61.2 166 33.1
MD16G1219200 Malus domestica HOM05D007526 ORTHO05D009350 1.1e-07 60.8 195 27.7
MELO3C006420.2 Cucumis melo HOM05D007526 ORTHO05D009350 1.5e-07 60.5 182 30.2
AL3G53510 Arabidopsis lyrata HOM05D013395 ORTHO05D015261 2.0e-07 60.1 167 32.3
Gohir.A09G229800 Gossypium hirsutum HOM05D007526 ORTHO05D009350 2.0e-07 60.1 192 29.2
Sabra08G0127400 Salix brachista HOM05D007526 ORTHO05D009350 2.6e-07 59.7 181 32.0
PGR004G2347 Punica granatum HOM05D007526 ORTHO05D009350 3.3e-07 59.3 185 28.1
Glyma.20G209500 Glycine max HOM05D007526 ORTHO05D009350 5.7e-07 58.5 167 30.5
CSS0016058 Camellia sinensis var. sinensis HOM05D007526 ORTHO05D009350 1.7e-06 57.0 162 29.6
Thhalv10002261m.g Eutrema salsugineum HOM05D013395 ORTHO05D015261 2.2e-06 56.6 167 33.5
PGSC0003DMG400017266 Solanum tuberosum HOM05D007526 ORTHO05D009350 2.2e-06 56.6 207 26.1
Glyma.02G005400 Glycine max HOM05D007526 ORTHO05D009350 2.8e-06 56.2 201 29.4
Potri.008G167200 Populus trichocarpa HOM05D007526 ORTHO05D009350 3.7e-06 55.8 177 29.9
Phvul.007G108400 Phaseolus vulgaris HOM05D007526 ORTHO05D009350 4.8e-06 55.5 169 27.8
AT2G20500 Arabidopsis thaliana HOM05D013395 ORTHO05D015261 6.3e-06 55.1 167 30.5


User provided reference genes

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