Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_24609 Corylus avellana HOM05D003973 ORTHO05D004679 0.0e+00 1857.8 908 100.0
CiPaw.03G262600 Carya illinoinensis HOM05D003973 ORTHO05D004679 0.0e+00 1432.2 883 81.2
Thecc.01G260300 Theobroma cacao HOM05D003973 ORTHO05D004679 0.0e+00 1410.6 910 77.9
QL09p038243 Quercus lobata HOM05D003973 ORTHO05D004679 0.0e+00 1385.5 911 77.3
Atru.chr5.1648 Acer truncatum HOM05D003973 ORTHO05D004679 0.0e+00 1365.5 941 73.9
COL.COLO4_05173 Corchorus olitorius HOM05D003973 ORTHO05D004679 0.0e+00 1359.4 907 76.1
Manes.12G031400 Manihot esculenta HOM05D003973 ORTHO05D004679 0.0e+00 1359.0 901 76.0
Gohir.D11G135600 Gossypium hirsutum HOM05D003973 ORTHO05D004679 0.0e+00 1350.5 912 75.2
Gohir.A11G129900 Gossypium hirsutum HOM05D003973 ORTHO05D004679 0.0e+00 1349.7 912 75.0
Gorai.004G072800 Gossypium raimondii HOM05D003973 ORTHO05D004679 0.0e+00 1349.0 910 75.6
Gorai.007G145200 Gossypium raimondii HOM05D003973 ORTHO05D004679 0.0e+00 1346.3 912 75.1
Ciclev10018809m.g Citrus clementina HOM05D003973 ORTHO05D004679 0.0e+00 1342.0 917 74.5
TWI18G0068 Tripterygium wilfordii HOM05D003973 ORTHO05D004679 0.0e+00 1339.3 914 74.0
TWI12G0927 Tripterygium wilfordii HOM05D003973 ORTHO05D004679 0.0e+00 1338.2 912 73.5
Potri.002G039900 Populus trichocarpa HOM05D003973 ORTHO05D004679 0.0e+00 1337.8 926 74.3
Cpa.g.sc50.33 Carica papaya HOM05D003973 ORTHO05D004679 0.0e+00 1326.2 910 74.4
Duzib138G0375 Durio zibethinus HOM05D003973 ORTHO05D004679 0.0e+00 1322.0 910 73.4
Hma1.2p1_0621F.1_g190820 Hydrangea macrophylla HOM05D003973 ORTHO05D004679 0.0e+00 1321.6 913 74.2
Potri.005G222800 Populus trichocarpa HOM05D003973 ORTHO05D004679 0.0e+00 1320.4 924 73.6
Sabra02G0032000 Salix brachista HOM05D003973 ORTHO05D004679 0.0e+00 1313.5 915 74.0
Actinidia12891 Actinidia chinensis HOM05D003973 ORTHO05D004679 0.0e+00 1312.0 908 73.2
TWI75G1776 Tripterygium wilfordii HOM05D003973 ORTHO05D004679 0.0e+00 1307.7 875 74.7
CANSAT01G0525 Cannabis sativa HOM05D003973 ORTHO05D004679 0.0e+00 1301.6 926 73.0
Sabra05G0171500 Salix brachista HOM05D003973 ORTHO05D004679 0.0e+00 1299.6 948 70.9
MD05G1199600 Malus domestica HOM05D003973 ORTHO05D004679 0.0e+00 1299.3 934 72.1
RcHm_v2.0_Chr6g0288391 Rosa chinensis HOM05D003973 ORTHO05D004679 0.0e+00 1298.1 932 71.7
CSS0019197 Camellia sinensis var. sinensis HOM05D003973 ORTHO05D004679 0.0e+00 1294.6 912 72.4
Dinv34610 Davidia involucrata HOM05D003973 ORTHO05D004679 0.0e+00 1292.7 906 72.5
MD10G1185900 Malus domestica HOM05D003973 ORTHO05D004679 0.0e+00 1291.6 916 72.4
Duzib133G1136 Durio zibethinus HOM05D003973 ORTHO05D004679 0.0e+00 1291.2 910 72.7
Gohir.D08G207800 Gossypium hirsutum HOM05D003973 ORTHO05D004679 0.0e+00 1286.6 910 71.3
Lalb_Chr06g0170381 Lupinus albus HOM05D003973 ORTHO05D004679 0.0e+00 1281.9 912 72.4
Ca_09689_v3 Cicer arietinum L. HOM05D003973 ORTHO05D004679 0.0e+00 1273.1 938 70.7
FAN27G0583 Fragaria x ananassa HOM05D003973 ORTHO05D004679 0.0e+00 1272.3 933 70.1
Prupe.8G225400 Prunus persica HOM05D003973 ORTHO05D004679 0.0e+00 1267.7 922 70.8
Glyma.10G035800 Glycine max HOM05D003973 ORTHO05D004679 0.0e+00 1266.5 908 70.8
Eucgr.B01536 Eucalyptus grandis HOM05D003973 ORTHO05D004679 0.0e+00 1263.4 914 70.7
arahy.Tifrunner.gnm1.ann1.M1CRL2 Arachis hypogaea HOM05D003973 ORTHO05D004679 0.0e+00 1262.3 916 71.5
FvH4_2g21710 Fragaria vesca HOM05D003973 ORTHO05D004679 0.0e+00 1262.3 933 69.9
Medtr1g070160 Medicago truncatula HOM05D003973 ORTHO05D004679 0.0e+00 1262.3 914 71.0
TAR633G0700 Trochodendron aralioides HOM05D003973 ORTHO05D004679 0.0e+00 1261.9 910 71.4
Glyma.13G122200 Glycine max HOM05D003973 ORTHO05D004679 0.0e+00 1261.1 912 70.7
FAN24G2194 Fragaria x ananassa HOM05D003973 ORTHO05D004679 0.0e+00 1258.8 956 68.5
Lalb_Chr02g0152311 Lupinus albus HOM05D003973 ORTHO05D004679 0.0e+00 1257.7 914 72.0
Nn4g22928 Nelumbo nucifera HOM05D003973 ORTHO05D004679 0.0e+00 1256.5 919 70.1
Medtr7g096680 Medicago truncatula HOM05D003973 ORTHO05D004679 0.0e+00 1256.1 938 68.8
TPR.G16308 Trifolium pratense HOM05D003973 ORTHO05D004679 0.0e+00 1255.4 911 70.8
FAN20G1573 Fragaria x ananassa HOM05D003973 ORTHO05D004679 0.0e+00 1253.8 932 69.6
Lj5g0017930 Lotus japonicus HOM05D003973 ORTHO05D004679 0.0e+00 1252.3 911 70.9
VMungo1383G0117 Vigna mungo HOM05D003973 ORTHO05D004679 0.0e+00 1251.9 901 72.0
FAN15G1892 Fragaria x ananassa HOM05D003973 ORTHO05D004679 0.0e+00 1250.3 957 67.9
arahy.Tifrunner.gnm1.ann1.0L9E2L Arachis hypogaea HOM05D003973 ORTHO05D004679 0.0e+00 1247.6 939 69.6
Cc11_g02590 Coffea canephora HOM05D003973 ORTHO05D004679 0.0e+00 1245.0 904 69.9
Duzib211G0218 Durio zibethinus HOM05D003973 ORTHO05D004679 0.0e+00 1244.2 914 70.5
Glyma.03G162100 Glycine max HOM05D003973 ORTHO05D004679 0.0e+00 1243.0 916 71.2
Phvul.001G159900 Phaseolus vulgaris HOM05D003973 ORTHO05D004679 0.0e+00 1243.0 900 72.0
Lj1g0003934 Lotus japonicus HOM05D003973 ORTHO05D004679 0.0e+00 1239.9 909 71.1
TAR362G0234 Trochodendron aralioides HOM05D003973 ORTHO05D004679 0.0e+00 1239.9 912 70.2
Dinv22416 Davidia involucrata HOM05D003973 ORTHO05D004679 0.0e+00 1236.9 900 70.9
PGR044G1639 Punica granatum HOM05D003973 ORTHO05D004679 0.0e+00 1233.8 944 67.9
Glyma.19G163500 Glycine max HOM05D003973 ORTHO05D004679 0.0e+00 1232.2 916 70.3
Psat3g058480 Pisum sativum HOM05D003973 ORTHO05D004679 0.0e+00 1231.9 980 65.7
TPR.G3551 Trifolium pratense HOM05D003973 ORTHO05D004679 0.0e+00 1228.8 919 70.4
Gohir.A08G060000 Gossypium hirsutum HOM05D003973 ORTHO05D004679 0.0e+00 1223.4 904 70.8
GSVIVG01028304001 Vitis vinifera HOM05D003973 ORTHO05D004679 0.0e+00 1218.4 905 69.6
Gohir.D08G069200 Gossypium hirsutum HOM05D003973 ORTHO05D004679 0.0e+00 1215.7 910 69.5
Nitab4.5_0000129g0340 Nicotiana tabacum HOM05D003973 ORTHO05D004679 0.0e+00 1213.4 900 69.0
Nitab4.5_0001419g0010 Nicotiana tabacum HOM05D003973 ORTHO05D004679 0.0e+00 1210.7 900 69.0
CAN.G194.11 Capsicum annuum HOM05D003973 ORTHO05D004679 0.0e+00 1201.4 902 68.3
Rhsim13G0034000 Rhododendron simsii HOM05D003973 ORTHO05D004679 0.0e+00 1200.3 929 68.4
PGSC0003DMG400031378 Solanum tuberosum HOM05D003973 ORTHO05D004679 0.0e+00 1195.3 906 67.3
Sed0015853 Sechium edule HOM05D003973 ORTHO05D004679 0.0e+00 1190.3 919 66.8
ClCG07G000970 Citrullus lanatus HOM05D003973 ORTHO05D004679 0.0e+00 1189.9 923 66.8
MELO3C012904.2 Cucumis melo HOM05D003973 ORTHO05D004679 0.0e+00 1188.3 920 67.1
MBI17_g07970_MAGBIO Magnolia biondii HOM05D003973 ORTHO05D004679 0.0e+00 1186.0 916 67.0
Oeu026512.1 Olea europaea HOM05D003973 ORTHO05D004679 0.0e+00 1184.1 901 67.1
Peaxi162Scf00329g00811 Petunia axillaris HOM05D003973 ORTHO05D004679 0.0e+00 1183.3 937 65.8
CsaV3_3G022520 Cucumis sativus L. HOM05D003973 ORTHO05D004679 0.0e+00 1182.5 930 66.5
MSTRG.18316 Avicennia marina HOM05D003973 ORTHO05D004679 0.0e+00 1179.9 901 66.5
Sed0025131 Sechium edule HOM05D003973 ORTHO05D004679 0.0e+00 1179.1 921 66.2
arahy.Tifrunner.gnm1.ann1.61T5XF Arachis hypogaea HOM05D003973 ORTHO05D004679 0.0e+00 1178.7 907 67.9
arahy.Tifrunner.gnm1.ann1.B4WKJK Arachis hypogaea HOM05D003973 ORTHO05D004679 0.0e+00 1176.0 907 67.9
Solyc04g008630.3 Solanum lycopersicum HOM05D003973 ORTHO05D004679 0.0e+00 1169.8 938 64.7
Sopen04g003790 Solanum pennellii HOM05D003973 ORTHO05D004679 0.0e+00 1169.8 938 64.7
Gorai.004G220200 Gossypium raimondii HOM05D003973 ORTHO05D004679 0.0e+00 1169.1 796 73.6
Gohir.A08G189300 Gossypium hirsutum HOM05D003973 ORTHO05D004679 0.0e+00 1161.0 910 66.0
DCAR_005697 Daucus carota HOM05D003973 ORTHO05D004679 0.0e+00 1160.6 904 66.9
SalBow4G2825 Salvia bowleyana HOM05D003973 ORTHO05D004679 0.0e+00 1159.8 940 64.3
Lsat_1_v5_gn_9_8721 Lactuca sativa HOM05D003973 ORTHO05D004679 0.0e+00 1158.3 910 66.6
ECA247G3763 Erigeron canadensis HOM05D003973 ORTHO05D004679 0.0e+00 1155.6 909 66.6
THA.LOC104826212 Tarenaya hassleriana HOM05D003973 ORTHO05D004679 0.0e+00 1154.8 934 65.8
Aqoxy1G00848 Aquilegia oxysepala HOM05D003973 ORTHO05D004679 0.0e+00 1136.3 901 66.0
THA.LOC104800875 Tarenaya hassleriana HOM05D003973 ORTHO05D004679 0.0e+00 1133.2 920 66.1
HanXRQChr10g0281061 Helianthus annuus HOM05D003973 ORTHO05D004679 0.0e+00 1128.2 908 65.1
DCAR_000939 Daucus carota HOM05D003973 ORTHO05D004679 0.0e+00 1126.7 949 62.7
Thhalv10016226m.g Eutrema salsugineum HOM05D003973 ORTHO05D004679 0.0e+00 1120.9 926 65.6
Oeu039681.1 Olea europaea HOM05D003973 ORTHO05D004679 0.0e+00 1120.9 906 65.2
AL4G26480 Arabidopsis lyrata HOM05D003973 ORTHO05D004679 0.0e+00 1119.0 921 65.6
Lj2A1153G48 Lonicera japonica HOM05D003973 ORTHO05D004679 0.0e+00 1118.6 901 64.7
Sp4g13740 Schrenkiella parvula HOM05D003973 ORTHO05D004679 0.0e+00 1116.3 924 64.3
PSO063G1318 Papaver somniferum HOM05D003973 ORTHO05D004679 0.0e+00 1115.5 903 63.9
Ah.11g049650 Amaranthus hybridus HOM05D003973 ORTHO05D004679 0.0e+00 1112.1 919 62.7
HanXRQChr15g0467921 Helianthus annuus HOM05D003973 ORTHO05D004679 0.0e+00 1112.1 905 64.1
BcaB02g10369 Brassica carinata HOM05D003973 ORTHO05D004679 0.0e+00 1109.7 924 64.3
BolC4t27568H Brassica oleracea HOM05D003973 ORTHO05D004679 0.0e+00 1109.4 924 64.4
PSO782G1372 Papaver somniferum HOM05D003973 ORTHO05D004679 0.0e+00 1107.0 913 62.3
AT2G31260 Arabidopsis thaliana HOM05D003973 ORTHO05D004679 0.0e+00 1105.9 926 65.1
BcaB06g28520 Brassica carinata HOM05D003973 ORTHO05D004679 0.0e+00 1105.9 924 64.3
Carub.0004s1253 Capsella rubella HOM05D003973 ORTHO05D004679 0.0e+00 1105.1 919 64.6
C04p60770 Brassica napus HOM05D003973 ORTHO05D004679 0.0e+00 1102.4 925 64.5
Migut.D00414 Erythranthe guttata HOM05D003973 ORTHO05D004679 0.0e+00 1102.4 913 64.3
A04p24090 Brassica napus HOM05D003973 ORTHO05D004679 0.0e+00 1097.0 922 64.2
CARHR124850 Cardamine hirsuta HOM05D003973 ORTHO05D004679 0.0e+00 1090.1 921 63.6
Psat6g055320 Pisum sativum HOM05D003973 ORTHO05D004679 0.0e+00 1081.6 951 62.0
BraA04t17928Z Brassica rapa HOM05D003973 ORTHO05D004679 0.0e+00 1075.1 857 66.3
EL10Ac5g10415 Beta vulgaris HOM05D003973 ORTHO05D004679 8.0e-310 1067.0 989 57.5
BcaB06g28436 Brassica carinata HOM05D003973 ORTHO05D004679 8.0e-310 1067.0 925 61.8
Aa31LG5G5690 Aethionema arabicum HOM05D003973 ORTHO05D004679 2.6e-308 1062.0 840 66.1
Lj1A65T50 Lonicera japonica HOM05D003973 ORTHO05D004679 1.7e-307 1059.3 880 65.3
Phvul.007G194300 Phaseolus vulgaris HOM05D003973 ORTHO05D004679 1.2e-305 1053.1 932 60.4
Oeu058816.4 Olea europaea HOM05D003973 ORTHO05D004679 8.6e-304 1047.0 949 60.7
Hund09596 Selenicereus undatus HOM05D003973 ORTHO05D004679 1.9e-298 1029.2 925 60.9
vmacro02653 Vaccinium macrocarpon HOM05D003973 ORTHO05D004679 1.0e-296 1023.5 870 64.4
SGA_v2.0_scaffold138G35249 Striga asiatica HOM05D003973 ORTHO05D004679 1.7e-291 1006.1 899 60.0
HanXRQChr08g0217761 Helianthus annuus HOM05D003973 ORTHO05D004679 2.5e-287 992.3 903 58.6
Nn3g17035 Nelumbo nucifera HOM05D003973 ORTHO05D004679 4.0e-285 984.9 666 74.6
AUR62024730 Chenopodium quinoa HOM05D003973 ORTHO05D004679 1.1e-279 966.8 937 56.1
AUR62011889 Chenopodium quinoa HOM05D003973 ORTHO05D004679 8.1e-278 960.7 934 56.2
Sc17g0000740 Simmondsia chinensis HOM05D003973 ORTHO05D004679 1.9e-274 949.5 631 74.6
CiPaw.04G185700 Carya illinoinensis HOM05D003973 ORTHO05D004679 1.4e-266 923.3 617 77.6
unitig_0.g154 Utricularia gibba HOM05D003973 ORTHO05D004679 1.4e-266 923.3 919 55.7
ATR0680G230 Amborella trichopoda HOM05D003973 ORTHO05D004679 1.8e-261 906.4 865 56.8
SHI09836 Sapria himalayana HOM05D003973 ORTHO05D004679 2.4e-261 906.0 952 54.1
Os03g0248000 Oryza sativa ssp. japonica HOM05D003973 ORTHO05D004679 4.5e-252 875.2 922 51.6
Os10g0163100 Oryza sativa ssp. japonica HOM05D003973 ORTHO05D004679 5.7e-247 858.2 944 50.6
Zm00001eb010620 Zea mays HOM05D003973 ORTHO05D004679 2.1e-246 856.3 914 52.0
ATR0559G363 Amborella trichopoda HOM05D003973 ORTHO05D004679 2.8e-246 855.9 880 51.9
HPP92_008425 Vanilla planifolia HOM05D003973 ORTHO05D004679 2.4e-245 852.8 851 54.6
ECA236G2624 Erigeron canadensis HOM05D003973 ORTHO05D004679 6.9e-245 851.3 905 51.7
SEGI_30090 Sequoiadendron giganteum HOM05D003973 ORTHO05D004679 6.5e-235 818.1 895 51.5
Ah.02g111890 Amaranthus hybridus HOM05D003973 ORTHO05D004679 1.7e-230 803.5 843 52.8
HPP92_008421 Vanilla planifolia HOM05D003973 ORTHO05D004679 1.2e-225 787.3 648 61.6
SMO239G0162 Selaginella moellendorffii HOM05D003973 ORTHO05D004679 8.8e-208 728.0 613 58.4
Mapoly0002s0148 Marchantia polymorpha HOM05D003973 ORTHO05D004679 5.9e-204 715.3 900 43.9
Pp3c10_9800 Physcomitrium patens HOM05D003973 ORTHO05D004679 2.2e-203 713.4 900 44.1
Pp3c2_1820 Physcomitrium patens HOM05D003973 ORTHO05D004679 7.0e-197 691.8 908 43.0
BraA05t20372Z Brassica rapa HOM05D003973 ORTHO05D004679 8.6e-195 684.9 679 56.3
A05p14440 Brassica napus HOM05D003973 ORTHO05D004679 1.2e-191 674.5 679 55.5
CBR_g24398 Chara braunii HOM05D003973 ORTHO05D004679 4.6e-180 636.0 652 49.1
unitig_60.g25752 Utricularia gibba HOM05D003973 ORTHO05D004679 2.9e-174 616.7 924 40.8
VMungo0720G0690 Vigna mungo HOM05D003973 ORTHO05D004679 1.6e-169 600.9 630 53.8
MBI18_g15332_MAGBIO Magnolia biondii HOM05D003973 ORTHO05D004679 1.5e-143 514.6 551 51.5
AagrBONN_evm.TU.Sc2ySwM_117.1675 Anthoceros agrestis HOM05D003973 ORTHO05D004679 4.8e-137 493.0 612 42.8
AUR62024729 Chenopodium quinoa HOM05D003973 ORTHO05D004679 1.0e-134 485.3 476 55.3
CDE02G3928 Ceratophyllum demersum HOM05D003973 ORTHO05D004679 1.3e-113 415.2 513 46.6
MCO05G121 Micromonas commoda HOM05D003973 ORTHO05D004679 9.1e-112 409.1 615 36.3
CDE06G1379 Ceratophyllum demersum HOM05D003973 ORTHO05D004679 7.2e-109 399.4 513 46.0
BcaB06g28438 Brassica carinata HOM05D003973 ORTHO05D004679 1.6e-108 398.3 401 56.9
BolC4t23456H Brassica oleracea HOM05D003973 ORTHO05D004679 2.5e-101 374.4 265 69.8
Cre09.g391500 Chlamydomonas reinhardtii HOM05D003973 ORTHO05D004679 5.0e-86 323.6 740 29.6
CDE06G1301 Ceratophyllum demersum HOM05D003973 ORTHO05D004679 1.9e-85 321.6 225 68.9
C04p19230 Brassica napus HOM05D003973 ORTHO05D004679 1.2e-84 318.9 265 62.3
BcaC02g11207 Brassica carinata HOM05D003973 ORTHO05D004679 1.8e-75 288.5 175 78.3
Cfa025050 Carpinus fangiana HOM05D003973 ORTHO05D004679 3.6e-60 237.7 619 27.1
Hund02908 Selenicereus undatus HOM05D003973 ORTHO05D004679 5.2e-59 233.8 157 72.6
PRCOL_00006952 Prasinoderma coloniale HOM05D003973 ORTHO05D004679 4.4e-58 230.7 433 30.5
Sc17g0000730 Simmondsia chinensis HOM05D003973 ORTHO05D004679 8.7e-38 163.3 362 33.4
Psat2g015440 Pisum sativum HOM05D003973 ORTHO05D004679 1.1e-32 146.4 229 42.4
VMungo0720G0978 Vigna mungo HOM05D003973 ORTHO05D435101 1.8e-22 112.5 250 32.4
BcaB06g28437 Brassica carinata HOM05D003973 ORTHO05D004679 3.7e-20 104.8 65 76.9
CSS0024912 Camellia sinensis var. sinensis HOM05D003973 ORTHO05D004679 3.7e-20 104.8 74 71.6
AagrBONN_evm.TU.Sc2ySwM_344.134 Anthoceros agrestis HOM05D003973 ORTHO05D004679 6.2e-20 104.0 73 63.0
Hund02909 Selenicereus undatus HOM05D003973 ORTHO05D004679 4.6e-15 87.8 160 40.0
VMungo0251G0786 Vigna mungo HOM05D003973 ORTHO05D432747 8.2e-12 77.0 68 60.3


User provided reference genes

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