Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_24605 Corylus avellana HOM05D003134 ORTHO05D003500 2.3e-45 185.3 97 100.0
TWI31G0745 Tripterygium wilfordii HOM05D003134 ORTHO05D003500 4.8e-11 71.2 45 84.4
Cfa015849 Carpinus fangiana HOM05D003134 ORTHO05D003500 1.4e-10 69.7 42 88.1
QL01p040313 Quercus lobata HOM05D003134 ORTHO05D003500 1.4e-10 69.7 45 84.4
Cfa015852 Carpinus fangiana HOM05D003134 ORTHO05D003500 1.8e-10 69.3 63 66.7
Cfa015853 Carpinus fangiana HOM05D003134 ORTHO05D003500 1.8e-10 69.3 63 66.7
CiPaw.05G241000 Carya illinoinensis HOM05D003134 ORTHO05D003500 5.3e-10 67.8 61 65.6
Manes.06G065600 Manihot esculenta HOM05D003134 ORTHO05D003500 1.5e-09 66.2 61 63.9
Cpa.g.sc65.57 Carica papaya HOM05D003134 ORTHO05D003500 2.0e-09 65.9 61 63.9
THA.LOC104808293 Tarenaya hassleriana HOM05D003134 ORTHO05D003500 7.6e-09 63.9 75 52.0
CANSAT01G0067 Cannabis sativa HOM05D003134 ORTHO05D003500 2.2e-08 62.4 49 69.4
Ciclev10016989m.g Citrus clementina HOM05D003134 ORTHO05D003500 2.9e-08 62.0 42 78.6
Prupe.1G315800 Prunus persica HOM05D003134 ORTHO05D003500 5.0e-08 61.2 42 78.6
A02p14980 Brassica napus HOM05D003134 ORTHO05D003500 8.5e-08 60.5 49 69.4
BraA02t06565Z Brassica rapa HOM05D003134 ORTHO05D003500 8.5e-08 60.5 49 69.4
BolC2t08556H Brassica oleracea HOM05D003134 ORTHO05D003500 1.1e-07 60.1 49 69.4
Potri.010G121300 Populus trichocarpa HOM05D003134 ORTHO05D003500 1.9e-07 59.3 43 81.4
BcaB05g24377 Brassica carinata HOM05D003134 ORTHO05D003500 2.5e-07 58.9 49 67.3
Sabra10G0091400 Salix brachista HOM05D003134 ORTHO05D003500 2.5e-07 58.9 43 79.1
Thecc.02G223300 Theobroma cacao HOM05D003134 ORTHO05D003500 2.5e-07 58.9 42 76.2
COL.COLO4_32156 Corchorus olitorius HOM05D003134 ORTHO05D003500 4.2e-07 58.2 42 76.2
Duzib251G0591 Durio zibethinus HOM05D003134 ORTHO05D003500 4.2e-07 58.2 42 76.2
Oeu030792.1 Olea europaea HOM05D000260 ORTHO05D000318 5.5e-07 57.8 84 48.8
MD13G1036300 Malus domestica HOM05D003134 ORTHO05D003500 7.2e-07 57.4 39 76.9
MD16G1038900 Malus domestica HOM05D003134 ORTHO05D003500 9.3e-07 57.0 42 73.8
Duzib268G0372 Durio zibethinus HOM05D003134 ORTHO05D003500 1.2e-06 56.6 42 76.2
Gohir.D02G171600 Gossypium hirsutum HOM05D003134 ORTHO05D003500 1.2e-06 56.6 72 51.4
Gorai.005G193000 Gossypium raimondii HOM05D003134 ORTHO05D003500 1.2e-06 56.6 72 51.4
AT1G68430 Arabidopsis thaliana HOM05D003134 ORTHO05D003500 2.1e-06 55.8 45 68.9
Carub.0002s1492 Capsella rubella HOM05D003134 ORTHO05D003500 2.1e-06 55.8 45 68.9
Nn3g17932 Nelumbo nucifera HOM05D003134 ORTHO05D003500 2.1e-06 55.8 42 81.0
Nitab4.5_0000753g0120 Nicotiana tabacum HOM05D003134 ORTHO05D003500 2.1e-06 55.8 45 73.3
Oeu039736.1 Olea europaea HOM05D003134 ORTHO05D003500 2.1e-06 55.8 45 73.3
PGR042G1462 Punica granatum HOM05D003134 ORTHO05D003500 2.1e-06 55.8 42 76.2
Sp5g23500 Schrenkiella parvula HOM05D003134 ORTHO05D003500 2.1e-06 55.8 44 70.5
PGSC0003DMG400026385 Solanum tuberosum HOM05D001447 ORTHO05D005923 2.1e-06 55.8 45 73.3
TAR622G0779 Trochodendron aralioides HOM05D003134 ORTHO05D003500 2.1e-06 55.8 45 73.3
TAR622G1269 Trochodendron aralioides HOM05D003134 ORTHO05D003500 2.1e-06 55.8 45 73.3
ClCG01G005860 Citrullus lanatus HOM05D003134 ORTHO05D003500 2.7e-06 55.5 42 73.8
CsaV3_5G028830 Cucumis sativus L. HOM05D003134 ORTHO05D003500 2.7e-06 55.5 42 73.8
FvH4_4g26860 Fragaria vesca HOM05D003134 ORTHO05D003500 2.7e-06 55.5 45 66.7
FAN07G2257 Fragaria x ananassa HOM05D003134 ORTHO05D003500 2.7e-06 55.5 42 71.4
FAN12G3405 Fragaria x ananassa HOM05D003134 ORTHO05D003500 2.7e-06 55.5 45 66.7
FAN12G3727 Fragaria x ananassa HOM05D003134 ORTHO05D003500 2.7e-06 55.5 45 66.7
FAN22G0900 Fragaria x ananassa HOM05D003134 ORTHO05D003500 2.7e-06 55.5 45 66.7
HanXRQChr12g0375681 Helianthus annuus HOM05D003134 ORTHO05D003500 2.7e-06 55.5 54 66.7
Lj4P188T25 Lonicera japonica HOM05D003134 ORTHO05D003500 2.7e-06 55.5 42 78.6
Solyc02g086260.1 Solanum lycopersicum HOM05D003134 ORTHO05D003500 2.7e-06 55.5 53 66.0
PGSC0003DMG400002449 Solanum tuberosum HOM05D003134 ORTHO05D003500 2.7e-06 55.5 42 78.6
CANSAT78G1475 Cannabis sativa HOM05D003134 ORTHO05D003500 3.6e-06 55.1 46 71.7
Rhsim08G0083300 Rhododendron simsii HOM05D003134 ORTHO05D003500 3.6e-06 55.1 53 64.2
C02p24530 Brassica napus HOM05D003134 ORTHO05D003500 4.6e-06 54.7 49 65.3
Thhalv10019521m.g Eutrema salsugineum HOM05D003134 ORTHO05D003500 4.6e-06 54.7 69 52.2
Lsat_1_v5_gn_3_80541 Lactuca sativa HOM05D003134 ORTHO05D003500 4.6e-06 54.7 45 71.1
AL2G27290 Arabidopsis lyrata HOM05D003134 ORTHO05D003500 6.1e-06 54.3 45 66.7
Cpa.g.sc170.42 Carica papaya HOM05D003134 ORTHO05D003500 6.1e-06 54.3 57 59.6
Dinv33962 Davidia involucrata HOM05D003134 ORTHO05D003500 6.1e-06 54.3 45 71.1
Gohir.A03G148500 Gossypium hirsutum HOM05D003134 ORTHO05D003500 6.1e-06 54.3 72 50.0
Potri.008G123800 Populus trichocarpa HOM05D003134 ORTHO05D003500 6.1e-06 54.3 56 64.3
PGR119G2525 Punica granatum HOM05D003134 ORTHO05D003500 6.1e-06 54.3 43 72.1
SalBow3G2725 Salvia bowleyana HOM05D003134 ORTHO05D003500 6.1e-06 54.3 45 71.1
Sc10g0001080 Simmondsia chinensis HOM05D003134 ORTHO05D003500 6.1e-06 54.3 42 76.2
Solyc03g034300.1 Solanum lycopersicum HOM05D003134 ORTHO05D003500 6.1e-06 54.3 42 78.6
TAR374G1690 Trochodendron aralioides HOM05D003134 ORTHO05D003500 6.1e-06 54.3 45 68.9
Ciclev10013038m.g Citrus clementina HOM05D003134 ORTHO05D003500 7.9e-06 53.9 42 76.2
Cc07_g08620 Coffea canephora HOM05D003134 ORTHO05D003500 7.9e-06 53.9 45 71.1
Migut.H00233 Erythranthe guttata HOM05D003134 ORTHO05D003500 7.9e-06 53.9 60 58.3
Oeu012575.1 Olea europaea HOM05D003134 ORTHO05D003500 7.9e-06 53.9 45 71.1
Oeu012577.1 Olea europaea HOM05D003134 ORTHO05D003500 7.9e-06 53.9 45 71.1
Peaxi162Scf00394g00095 Petunia axillaris HOM05D003134 ORTHO05D003500 7.9e-06 53.9 41 78.0
PGSC0003DMG400024380 Solanum tuberosum HOM05D003134 ORTHO05D003500 7.9e-06 53.9 42 76.2
SGA_v2.0_scaffold49G18114 Striga asiatica HOM05D003134 ORTHO05D003500 7.9e-06 53.9 42 76.2


User provided reference genes

Program Settings