Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_24474 Corylus avellana HOM05D007641 ORTHO05D007630 0.0e+00 1210.7 597 100.0
QL01p024477 Quercus lobata HOM05D007641 ORTHO05D007630 9.2e-214 747.3 595 66.4
CiPaw.13G063300 Carya illinoinensis HOM05D007641 ORTHO05D007630 1.0e-204 717.2 596 64.9
Dinv28733 Davidia involucrata HOM05D007641 ORTHO05D007630 9.5e-134 481.5 610 47.4
Atru.chr10.2293 Acer truncatum HOM05D007641 ORTHO05D007630 2.3e-124 450.3 607 45.5
Potri.013G157800 Populus trichocarpa HOM05D007641 ORTHO05D007630 6.8e-108 395.6 610 43.3
Sabra13G0126700 Salix brachista HOM05D007641 ORTHO05D002352 3.2e-105 386.7 617 42.0
Actinidia34497 Actinidia chinensis HOM05D007641 ORTHO05D007630 4.0e-100 369.8 605 39.3
RcHm_v2.0_Chr5g0073231 Rosa chinensis HOM05D007641 ORTHO05D007630 2.0e-99 367.5 597 41.4
Thecc.09G364100 Theobroma cacao HOM05D007641 ORTHO05D007630 2.9e-98 363.6 602 39.9
Prupe.6G040800 Prunus persica HOM05D007641 ORTHO05D007630 3.1e-92 343.6 599 40.9
vmacro14640 Vaccinium macrocarpon HOM05D007641 ORTHO05D007630 1.5e-91 341.3 605 37.0
Rhsim01G0243500 Rhododendron simsii HOM05D007641 ORTHO05D007630 3.5e-88 330.1 645 35.2
FAN25G3378 Fragaria x ananassa HOM05D007641 ORTHO05D007630 3.8e-82 310.1 595 38.8
FvH4_3g40550 Fragaria vesca HOM05D007641 ORTHO05D007630 6.4e-82 309.3 600 38.5
FAN11G1956 Fragaria x ananassa HOM05D007641 ORTHO05D007630 1.1e-81 308.5 600 38.3
FAN16G1217 Fragaria x ananassa HOM05D007641 ORTHO05D007630 4.8e-77 293.1 600 37.5
Hma1.2p1_0119F.1_g056956 Hydrangea macrophylla HOM05D007641 ORTHO05D007630 8.1e-77 292.4 497 37.0
Manes.02G212232 Manihot esculenta HOM05D007641 ORTHO05D007630 8.1e-77 292.4 583 36.7
CANSAT54G2173 Cannabis sativa HOM05D007641 ORTHO05D007630 4.9e-74 283.1 589 37.9
TWI79G1607 Tripterygium wilfordii HOM05D007641 ORTHO05D007630 4.2e-73 280.0 590 36.9
Duzib168G1492 Durio zibethinus HOM05D007641 ORTHO05D007630 1.2e-72 278.5 605 34.4
COL.COLO4_11217 Corchorus olitorius HOM05D007641 ORTHO05D007630 7.4e-70 269.2 644 32.5
Gorai.004G000600 Gossypium raimondii HOM05D007641 ORTHO05D007630 4.0e-68 263.5 580 34.5
Gohir.D08G007350 Gossypium hirsutum HOM05D007641 ORTHO05D007630 6.7e-63 246.1 580 34.0
Lalb_Chr18g0054201 Lupinus albus HOM05D007641 ORTHO05D007630 1.3e-58 231.9 600 33.7
Nn2g10289 Nelumbo nucifera HOM05D007641 ORTHO05D007630 2.9e-58 230.7 618 33.8
Gorai.012G000300 Gossypium raimondii HOM05D007641 ORTHO05D007630 6.1e-56 223.0 521 34.4
Glyma.18G052000 Glycine max HOM05D007641 ORTHO05D007630 7.9e-56 222.6 595 34.3
arahy.Tifrunner.gnm1.ann1.4PHV2I Arachis hypogaea HOM05D007641 ORTHO05D007630 1.5e-54 218.4 599 33.1
Gohir.1Z049529 Gossypium hirsutum HOM05D007641 ORTHO05D007630 3.7e-53 213.8 473 34.9
Sed0007856 Sechium edule HOM05D007641 ORTHO05D007630 3.7e-53 213.8 591 32.7
Aqoxy1G01263 Aquilegia oxysepala HOM05D007641 ORTHO05D007630 1.1e-52 212.2 580 31.7
arahy.Tifrunner.gnm1.ann1.F8RHVN Arachis hypogaea HOM05D007641 ORTHO05D007630 4.1e-52 210.3 589 33.1
Phvul.006G079400 Phaseolus vulgaris HOM05D007641 ORTHO05D007630 1.2e-51 208.8 601 33.1
ClCG02G019020 Citrullus lanatus HOM05D007641 ORTHO05D007630 1.0e-50 205.7 587 32.4
Gohir.A08G000032 Gossypium hirsutum HOM05D007641 ORTHO05D007630 2.9e-50 204.1 584 31.2
MELO3C019578.2 Cucumis melo HOM05D007641 ORTHO05D007630 1.4e-49 201.8 619 31.5
Ciclev10001550m.g Citrus clementina HOM05D007641 ORTHO05D007630 3.2e-49 200.7 372 39.8
TAR633G1590 Trochodendron aralioides HOM05D007641 ORTHO05D007630 3.2e-49 200.7 392 37.5
Gohir.D12G000401 Gossypium hirsutum HOM05D007641 ORTHO05D007630 5.5e-49 199.9 583 31.0
TPR.G13882 Trifolium pratense HOM05D007641 ORTHO05D007630 1.4e-47 195.3 595 32.1
Medtr3g467390 Medicago truncatula HOM05D007641 ORTHO05D007630 3.0e-47 194.1 592 32.1
MBI15_g36478_MAGBIO Magnolia biondii HOM05D007641 ORTHO05D007630 1.1e-44 185.7 592 29.6
VMungo0540G0343 Vigna mungo HOM05D007641 ORTHO05D007630 1.1e-44 185.7 599 31.6
Psat5g147960 Pisum sativum HOM05D007641 ORTHO05D007630 5.3e-44 183.3 589 32.3
Lj6g0005873 Lotus japonicus HOM05D007641 ORTHO05D007630 1.4e-39 168.7 596 31.2
Ciclev10004023m.g Citrus clementina HOM05D007641 ORTHO05D007630 7.4e-38 162.9 212 44.3
Sc23g0005090 Simmondsia chinensis HOM05D007641 ORTHO05D007630 3.7e-37 160.6 592 29.6
Gohir.1Z049434 Gossypium hirsutum HOM05D007641 ORTHO05D007630 4.5e-35 153.7 511 29.5
HanXRQChr08g0230341 Helianthus annuus HOM05D007641 ORTHO05D007630 5.0e-34 150.2 417 30.9
FAN21G1070 Fragaria x ananassa HOM05D007641 ORTHO05D007630 1.5e-33 148.7 325 36.9
Ca_15060_v3 Cicer arietinum L. HOM05D007641 ORTHO05D007630 1.9e-33 148.3 530 30.6
AL4G25360 Arabidopsis lyrata HOM05D001940 ORTHO05D007630 4.0e-31 140.6 388 32.5
CsaV3_6G013130 Cucumis sativus L. HOM05D007641 ORTHO05D007630 5.2e-31 140.2 584 28.6
THA.LOC104815825 Tarenaya hassleriana HOM05D001940 ORTHO05D007630 1.2e-30 139.0 536 29.9
MD11G1053300 Malus domestica HOM05D007641 ORTHO05D007630 2.8e-29 134.4 248 39.5
Carub.0004s1164 Capsella rubella HOM05D001940 ORTHO05D007630 7.7e-27 126.3 391 31.2
AT2G30480 Arabidopsis thaliana HOM05D001940 ORTHO05D007630 1.3e-26 125.6 387 31.3
Sopen09g001120 Solanum pennellii HOM05D014625 ORTHO05D007630 1.3e-26 125.6 620 27.1
TAR636G3352 Trochodendron aralioides HOM05D007641 ORTHO05D007630 3.8e-26 124.0 281 32.7
Migut.D00817 Erythranthe guttata HOM05D007641 ORTHO05D007630 8.5e-26 122.9 292 32.9
Oeu064683.1 Olea europaea HOM05D007641 ORTHO05D007630 5.5e-25 120.2 606 26.4
Lj2A1102G26 Lonicera japonica HOM05D007641 ORTHO05D007630 1.2e-24 119.0 311 34.7
Solyc09g005140.2 Solanum lycopersicum HOM05D014625 ORTHO05D007630 1.6e-24 118.6 620 26.1
Thhalv10017756m.g Eutrema salsugineum HOM05D001940 ORTHO05D007630 1.4e-23 115.5 386 28.8
PSO170G4823 Papaver somniferum HOM05D007641 ORTHO05D007630 2.3e-23 114.8 695 25.9
ECA247G3209 Erigeron canadensis HOM05D007641 ORTHO05D007630 5.2e-23 113.6 455 27.7
Sp4g13010 Schrenkiella parvula HOM05D001940 ORTHO05D007630 1.4e-20 105.5 557 25.7
BcaB02g10326 Brassica carinata HOM05D001940 ORTHO05D007630 1.2e-19 102.4 398 29.4
Hund18459 Selenicereus undatus HOM05D029401 ORTHO05D007630 3.5e-19 100.9 567 25.4
Cpa.g.sc2.293 Carica papaya HOM05D007641 ORTHO05D007630 1.3e-18 99.0 121 47.9
Peaxi162Scf00605g00515 Petunia axillaris HOM05D014625 ORTHO05D007630 2.5e-17 94.7 619 24.4
SGA_v2.0_scaffold20G09288 Striga asiatica HOM05D007641 ORTHO05D007630 2.5e-17 94.7 270 30.4
AUR62001158 Chenopodium quinoa HOM05D029401 ORTHO05D007630 3.3e-17 94.4 615 24.2
BcaC02g11137 Brassica carinata HOM05D001940 ORTHO05D007630 5.5e-17 93.6 393 27.2
Cpa.g.sc2.294 Carica papaya HOM05D007641 ORTHO05D007630 7.2e-17 93.2 133 43.6
MD11G1053200 Malus domestica HOM05D007641 ORTHO05D007630 7.2e-17 93.2 148 39.2
A05p14980 Brassica napus HOM05D001940 ORTHO05D007630 1.6e-16 92.0 382 28.3
Gorai.002G184200 Gossypium raimondii HOM05D007641 ORTHO05D007630 2.1e-16 91.7 163 38.7
GSVIVG01024556001 Vitis vinifera HOM05D007641 ORTHO05D007630 3.6e-16 90.9 105 43.8
AUR62016518 Chenopodium quinoa HOM05D029401 ORTHO05D007630 2.3e-15 88.2 346 27.2
PSO017G1347 Papaver somniferum HOM05D007641 ORTHO05D007630 4.4e-14 84.0 201 32.8
Glyma.11G198150 Glycine max HOM05D007641 ORTHO05D007630 5.7e-14 83.6 139 37.4
Lsat_1_v5_gn_9_13760 Lactuca sativa HOM05D007641 ORTHO05D007630 2.4e-12 78.2 136 37.5
Glyma.11G198000 Glycine max HOM05D007641 ORTHO05D007630 4.5e-11 73.9 159 35.2
EL10Ac7g17950 Beta vulgaris HOM05D029401 ORTHO05D007630 1.7e-10 72.0 546 23.6
C04p20070 Brassica napus HOM05D001940 ORTHO05D007630 3.9e-10 70.9 402 25.6
CARHR123930 Cardamine hirsuta HOM05D001940 ORTHO05D007630 8.6e-10 69.7 166 31.3
PGR102G3245 Punica granatum HOM05D007641 ORTHO05D007630 3.6e-08 64.3 221 29.4
Gohir.D01G148301 Gossypium hirsutum HOM05D007641 ORTHO05D007630 1.0e-07 62.8 109 39.4
TAR636G0755 Trochodendron aralioides HOM05D007641 ORTHO05D007630 1.4e-07 62.4 129 38.0
DCAR_018642 Daucus carota HOM05D007641 ORTHO05D007630 1.8e-07 62.0 136 33.1
Os01g0167700 Oryza sativa ssp. japonica HOM05D052079 ORTHO05D007630 4.0e-07 60.8 284 26.1
BraA05t20424Z Brassica rapa HOM05D001940 ORTHO05D007630 3.4e-06 57.8 139 31.7
HPP92_015425 Vanilla planifolia HOM05D007641 ORTHO05D007630 3.4e-06 57.8 69 42.0
GSVIVG01024555001 Vitis vinifera HOM05D007641 ORTHO05D007630 7.5e-06 56.6 28 92.9
ATR1127G234 Amborella trichopoda HOM05D007641 ORTHO05D007630 9.8e-06 56.2 61 45.9


User provided reference genes

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