Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_24472 Corylus avellana HOM05D003400 ORTHO05D003687 4.8e-227 790.8 395 100.0
CiPaw.13G063500 Carya illinoinensis HOM05D003400 ORTHO05D003687 2.0e-103 380.2 400 56.5
QL01p024561 Quercus lobata HOM05D003400 ORTHO05D003687 1.0e-88 331.3 361 56.0
TAR623G0519 Trochodendron aralioides HOM05D003400 ORTHO05D003687 7.1e-53 212.2 424 38.7
TAR369G0853 Trochodendron aralioides HOM05D003400 ORTHO05D003687 2.3e-51 207.2 346 42.8
TAR633G0453 Trochodendron aralioides HOM05D003400 ORTHO05D003687 1.1e-50 204.9 429 38.0
Nn2g10302 Nelumbo nucifera HOM05D003400 ORTHO05D003687 5.3e-48 196.1 349 43.0
Aqoxy4G02422 Aquilegia oxysepala HOM05D003400 ORTHO05D003687 4.4e-47 193.0 400 38.2
GSVIVG01032673001 Vitis vinifera HOM05D003400 ORTHO05D003687 4.4e-47 193.0 373 40.2
Actinidia13648 Actinidia chinensis HOM05D003400 ORTHO05D003687 3.5e-44 183.3 348 38.2
VMungo0647G2516 Vigna mungo HOM05D003400 ORTHO05D003687 1.0e-43 181.8 381 38.6
Phvul.001G062900 Phaseolus vulgaris HOM05D003400 ORTHO05D003687 6.6e-43 179.1 377 38.7
Prupe.2G264100 Prunus persica HOM05D003400 ORTHO05D003687 3.6e-41 173.3 372 37.4
Nn5g26847 Nelumbo nucifera HOM05D003400 ORTHO05D003687 1.1e-40 171.8 364 37.6
Lj1g0015659 Lotus japonicus HOM05D003400 ORTHO05D003687 2.4e-40 170.6 342 38.3
Hma1.2p1_0292F.1_g115970 Hydrangea macrophylla HOM05D003400 ORTHO05D003687 3.1e-40 170.2 378 36.5
ClCG07G005110 Citrullus lanatus HOM05D003400 ORTHO05D003687 4.0e-40 169.9 383 35.2
CiPaw.01G306600 Carya illinoinensis HOM05D003400 ORTHO05D003687 5.3e-40 169.5 403 36.5
Lj8C54T21 Lonicera japonica HOM05D003400 ORTHO05D003687 6.9e-40 169.1 328 39.0
Nitab4.5_0002745g0010 Nicotiana tabacum HOM05D003400 ORTHO05D003687 6.9e-40 169.1 349 38.7
arahy.Tifrunner.gnm1.ann1.JMN63H Arachis hypogaea HOM05D003400 ORTHO05D003687 9.0e-40 168.7 318 37.4
Nitab4.5_0000171g0020 Nicotiana tabacum HOM05D003400 ORTHO05D003687 9.0e-40 168.7 349 38.7
arahy.Tifrunner.gnm1.ann1.45IBUQ Arachis hypogaea HOM05D003400 ORTHO05D003687 2.0e-39 167.5 319 37.6
CSS0037757 Camellia sinensis var. sinensis HOM05D003400 ORTHO05D003687 2.0e-39 167.5 347 37.5
Actinidia07793 Actinidia chinensis HOM05D003400 ORTHO05D003687 9.9e-39 165.2 324 38.9
Eucgr.J00113 Eucalyptus grandis HOM05D003400 ORTHO05D003687 1.3e-38 164.9 346 37.6
Rhsim09G0185900 Rhododendron simsii HOM05D003400 ORTHO05D003687 1.3e-38 164.9 372 35.5
MBI03_g15591_MAGBIO Magnolia biondii HOM05D003400 ORTHO05D003687 1.7e-38 164.5 383 36.8
Sed0002948 Sechium edule HOM05D003400 ORTHO05D003687 2.9e-38 163.7 382 36.6
Thecc.10G181000 Theobroma cacao HOM05D003400 ORTHO05D003687 2.9e-38 163.7 386 36.3
Actinidia31626 Actinidia chinensis HOM05D003400 ORTHO05D003687 3.8e-38 163.3 333 38.7
AUR62030610 Chenopodium quinoa HOM05D003400 ORTHO05D003687 4.9e-38 162.9 394 34.3
Haze_17357 Corylus avellana HOM05D003400 ORTHO05D003687 6.4e-38 162.5 384 35.2
MELO3C020148.2 Cucumis melo HOM05D003400 ORTHO05D003687 8.4e-38 162.2 345 36.5
Glyma.14G117500 Glycine max HOM05D003400 ORTHO05D003687 8.4e-38 162.2 382 35.6
AUR62024934 Chenopodium quinoa HOM05D003400 ORTHO05D003687 1.1e-37 161.8 395 33.2
Dinv21846 Davidia involucrata HOM05D003400 ORTHO05D003687 1.9e-37 161.0 428 34.6
Hma1.2p1_0264F.1_g106160 Hydrangea macrophylla HOM05D003400 ORTHO05D003687 2.4e-37 160.6 355 37.2
PSO170G4360 Papaver somniferum HOM05D003400 ORTHO05D003687 2.4e-37 160.6 320 36.9
CsaV3_5G010950 Cucumis sativus L. HOM05D003400 ORTHO05D003687 4.2e-37 159.8 350 36.0
Glyma.17G191500 Glycine max HOM05D003400 ORTHO05D003687 4.2e-37 159.8 382 35.1
MD07G1233700 Malus domestica HOM05D003400 ORTHO05D003687 4.2e-37 159.8 336 37.5
vmacro09957 Vaccinium macrocarpon HOM05D003400 ORTHO05D003687 4.2e-37 159.8 339 38.3
Sopen06g015320 Solanum pennellii HOM05D003400 ORTHO05D003687 5.4e-37 159.5 342 36.8
Manes.10G001400 Manihot esculenta HOM05D003400 ORTHO05D003687 7.1e-37 159.1 346 35.5
Ca_12768_v3 Cicer arietinum L. HOM05D003400 ORTHO05D003687 9.3e-37 158.7 347 37.8
Potri.019G058200 Populus trichocarpa HOM05D003400 ORTHO05D003687 9.3e-37 158.7 362 35.4
Gohir.A05G403000 Gossypium hirsutum HOM05D003400 ORTHO05D003687 1.2e-36 158.3 405 34.3
QL08p064852 Quercus lobata HOM05D003400 ORTHO05D003687 1.2e-36 158.3 372 35.8
Ciclev10030981m.g Citrus clementina HOM05D003400 ORTHO05D003687 1.6e-36 157.9 364 34.3
PSO017G2438 Papaver somniferum HOM05D003400 ORTHO05D003687 1.6e-36 157.9 341 36.1
CAN.G24.15 Capsicum annuum HOM05D003400 ORTHO05D003687 2.1e-36 157.5 385 34.3
Cc02_g05370 Coffea canephora HOM05D003400 ORTHO05D003687 2.7e-36 157.1 343 34.1
Lalb_Chr24g0402681 Lupinus albus HOM05D003400 ORTHO05D003687 2.7e-36 157.1 355 37.7
Solyc06g048970.3 Solanum lycopersicum HOM05D003400 ORTHO05D003687 3.5e-36 156.8 342 36.5
PGSC0003DMG400016640 Solanum tuberosum HOM05D003400 ORTHO05D003687 3.5e-36 156.8 340 36.5
Gohir.D04G012500 Gossypium hirsutum HOM05D003400 ORTHO05D003687 4.6e-36 156.4 406 33.0
Gorai.012G014800 Gossypium raimondii HOM05D003400 ORTHO05D003687 4.6e-36 156.4 406 33.0
Psat6g036400 Pisum sativum HOM05D003400 ORTHO05D003687 4.6e-36 156.4 327 37.3
Hund15817 Selenicereus undatus HOM05D003400 ORTHO05D003687 6.0e-36 156.0 346 36.1
CANSAT21G1871 Cannabis sativa HOM05D003400 ORTHO05D003687 1.0e-35 155.2 329 35.3
Peaxi162Scf00739g00321 Petunia axillaris HOM05D003400 ORTHO05D003687 1.0e-35 155.2 343 37.3
Cpa.g.sc19.58 Carica papaya HOM05D003400 ORTHO05D003687 1.3e-35 154.8 360 36.1
Ca_03351_v3 Cicer arietinum L. HOM05D003400 ORTHO05D003687 1.3e-35 154.8 373 35.7
Duzib114G0186 Durio zibethinus HOM05D003400 ORTHO05D003687 1.3e-35 154.8 404 33.4
Lalb_Chr22g0360931 Lupinus albus HOM05D003400 ORTHO05D003687 2.3e-35 154.1 349 35.2
TWI09G1099 Tripterygium wilfordii HOM05D003400 ORTHO05D003687 2.3e-35 154.1 343 36.7
Atru.chr12.183 Acer truncatum HOM05D003400 ORTHO05D003687 3.0e-35 153.7 338 34.9
EL10Ac2g02645 Beta vulgaris HOM05D003400 ORTHO05D003687 3.0e-35 153.7 385 34.5
Manes.07G143400 Manihot esculenta HOM05D003400 ORTHO05D003687 3.9e-35 153.3 333 34.5
PGR044G0713 Punica granatum HOM05D003400 ORTHO05D003687 3.9e-35 153.3 349 34.7
Sabra19G0073600 Salix brachista HOM05D003400 ORTHO05D003687 3.9e-35 153.3 352 34.7
TWI53G0017 Tripterygium wilfordii HOM05D003400 ORTHO05D003687 6.7e-35 152.5 382 33.0
COL.COLO4_19367 Corchorus olitorius HOM05D003400 ORTHO05D003687 1.9e-34 151.0 424 32.8
Medtr1g007460 Medicago truncatula HOM05D003400 ORTHO05D003687 1.9e-34 151.0 335 36.4
Rhsim03G0152500 Rhododendron simsii HOM05D003400 ORTHO05D003687 1.9e-34 151.0 364 33.8
CDE04G0272 Ceratophyllum demersum HOM05D003400 ORTHO05D003687 2.5e-34 150.6 336 36.0
DCAR_018037 Daucus carota HOM05D003400 ORTHO05D003687 2.5e-34 150.6 351 34.2
Manes.07G141701 Manihot esculenta HOM05D003400 ORTHO05D003687 5.6e-34 149.4 336 34.2
CANSAT21G0473 Cannabis sativa HOM05D003400 ORTHO05D003687 1.6e-33 147.9 331 35.6
Lj1C967G2 Lonicera japonica HOM05D003400 ORTHO05D003687 2.1e-33 147.5 334 37.1
MD01G1167700 Malus domestica HOM05D003400 ORTHO05D003687 3.7e-33 146.7 337 35.0
Oeu063984.1 Olea europaea HOM05D003400 ORTHO05D003687 3.7e-33 146.7 334 34.7
TPR.G24491 Trifolium pratense HOM05D003400 ORTHO05D003687 6.2e-33 146.0 345 35.1
MBI15_g01598_MAGBIO Magnolia biondii HOM05D003400 ORTHO05D003687 8.1e-33 145.6 346 36.4
DCAR_029743 Daucus carota HOM05D000792 ORTHO05D004195 1.1e-32 145.2 356 35.1
HanXRQChr08g0221571 Helianthus annuus HOM05D003400 ORTHO05D003687 1.1e-32 145.2 330 37.0
Hund13449 Selenicereus undatus HOM05D003400 ORTHO05D003687 1.1e-32 145.2 346 35.3
FAN01G0709 Fragaria x ananassa HOM05D003400 ORTHO05D003687 1.4e-32 144.8 391 32.0
RcHm_v2.0_Chr1g0372301 Rosa chinensis HOM05D003400 ORTHO05D003687 1.4e-32 144.8 393 33.3
Zm00001eb231310 Zea mays HOM05D003400 ORTHO05D003687 2.4e-32 144.1 326 34.4
FAN10G0615 Fragaria x ananassa HOM05D003400 ORTHO05D003687 3.1e-32 143.7 395 31.6
C09p71460 Brassica napus HOM05D003400 ORTHO05D003687 4.0e-32 143.3 332 36.4
Gohir.D05G280400 Gossypium hirsutum HOM05D003400 ORTHO05D003687 4.0e-32 143.3 377 34.5
Os02g0132200 Oryza sativa ssp. japonica HOM05D003400 ORTHO05D003687 4.0e-32 143.3 328 35.4
Rhsim03G0152100 Rhododendron simsii HOM05D003400 ORTHO05D003687 9.0e-32 142.1 359 32.0
Lsat_1_v5_gn_9_60041 Lactuca sativa HOM05D003400 ORTHO05D003687 1.2e-31 141.7 397 33.5
MSTRG.8889 Avicennia marina HOM05D003400 ORTHO05D003687 1.5e-31 141.4 344 33.7
BolC9t59909H Brassica oleracea HOM05D003400 ORTHO05D003687 2.0e-31 141.0 332 36.4
Migut.F01244 Erythranthe guttata HOM05D003400 ORTHO05D003687 2.0e-31 141.0 304 37.2
Gorai.009G293800 Gossypium raimondii HOM05D003400 ORTHO05D003687 2.0e-31 141.0 381 33.6
Duzib106G2049 Durio zibethinus HOM05D003400 ORTHO05D003687 4.5e-31 139.8 368 33.7
ECA232G0413 Erigeron canadensis HOM05D003400 ORTHO05D003687 4.5e-31 139.8 355 34.4
FAN03G2499 Fragaria x ananassa HOM05D003400 ORTHO05D003687 5.8e-31 139.4 396 31.3
EL10Ac3g07235 Beta vulgaris HOM05D003400 ORTHO05D003687 9.9e-31 138.7 432 31.9
FvH4_7g25930 Fragaria vesca HOM05D003400 ORTHO05D003687 9.9e-31 138.7 394 31.2
SalBow3G2848 Salvia bowleyana HOM05D003400 ORTHO05D003687 9.9e-31 138.7 351 36.8
FAN06G1869 Fragaria x ananassa HOM05D003400 ORTHO05D003687 1.7e-30 137.9 394 31.2
BcaC06g32233 Brassica carinata HOM05D003400 ORTHO05D003687 2.2e-30 137.5 319 35.7
THA.LOC104816509 Tarenaya hassleriana HOM05D003400 ORTHO05D003687 4.9e-30 136.3 334 34.7
A10p30950 Brassica napus HOM05D003400 ORTHO05D003687 8.4e-30 135.6 334 34.4
BraA10t45140Z Brassica rapa HOM05D003400 ORTHO05D003687 8.4e-30 135.6 334 34.4
Sp6g37590 Schrenkiella parvula HOM05D003400 ORTHO05D003687 8.4e-30 135.6 360 32.5
THA.LOC104823169 Tarenaya hassleriana HOM05D003400 ORTHO05D003687 8.4e-30 135.6 355 33.2
CARHR207990 Cardamine hirsuta HOM05D003400 ORTHO05D003687 1.1e-29 135.2 381 32.8
MSTRG.171 Avicennia marina HOM05D003400 ORTHO05D003687 1.4e-29 134.8 350 35.1
Thhalv10013224m.g Eutrema salsugineum HOM05D003400 ORTHO05D003687 4.2e-29 133.3 332 32.5
Migut.F00607 Erythranthe guttata HOM05D003400 ORTHO05D003687 3.5e-28 130.2 315 33.7
Gohir.A05G278600 Gossypium hirsutum HOM05D003400 ORTHO05D003687 1.0e-27 128.6 319 33.9
SGA_v2.0_scaffold60G20888 Striga asiatica HOM05D003400 ORTHO05D003687 1.0e-27 128.6 303 35.0
PSO384G0897 Papaver somniferum HOM05D003400 ORTHO05D003687 1.3e-27 128.3 365 30.1
ECA233G0468 Erigeron canadensis HOM05D003400 ORTHO05D003687 1.8e-27 127.9 316 35.4
SGA_v2.0_scaffold44G16620 Striga asiatica HOM05D003400 ORTHO05D003687 2.3e-27 127.5 338 33.1
Lsat_1_v5_gn_8_11440 Lactuca sativa HOM05D003400 ORTHO05D003687 3.0e-27 127.1 324 34.6
Sed0014609 Sechium edule HOM05D003400 ORTHO05D003687 3.9e-27 126.7 336 34.2
BcaB05g21725 Brassica carinata HOM05D003400 ORTHO05D003687 6.7e-27 125.9 336 33.0
Dinv34484 Davidia involucrata HOM05D003400 ORTHO05D003687 6.7e-27 125.9 365 33.4
TAR636G0727 Trochodendron aralioides HOM05D003400 ORTHO05D003687 3.3e-26 123.6 192 39.1
PSO339G6613 Papaver somniferum HOM05D003400 ORTHO05D003687 5.6e-26 122.9 378 28.3
AT5G05240 Arabidopsis thaliana HOM05D003400 ORTHO05D003687 7.4e-26 122.5 335 32.5
Potri.013G157700 Populus trichocarpa HOM05D003400 ORTHO05D003687 1.3e-25 121.7 279 36.2
Aa31LG11G6090 Aethionema arabicum HOM05D003400 ORTHO05D003687 2.1e-25 120.9 327 30.0
AL6G15080 Arabidopsis lyrata HOM05D003400 ORTHO05D003687 1.1e-24 118.6 349 31.2
Carub.0006s0417 Capsella rubella HOM05D003400 ORTHO05D003687 1.4e-24 118.2 339 32.2
Aa31LG3G1490 Aethionema arabicum HOM05D003400 ORTHO05D003687 9.0e-24 115.5 350 30.6
Potri.013G091100 Populus trichocarpa HOM05D003400 ORTHO05D003687 2.6e-23 114.0 381 29.7
vmacro06891 Vaccinium macrocarpon HOM05D003400 ORTHO05D003687 2.6e-23 114.0 359 31.5
C02p02230 Brassica napus HOM05D003400 ORTHO05D003687 4.5e-23 113.2 341 29.6
BcaC03g13153 Brassica carinata HOM05D003400 ORTHO05D003687 5.8e-23 112.8 311 31.5
BolC2t06192H Brassica oleracea HOM05D003400 ORTHO05D003687 5.8e-23 112.8 312 30.1
DCAR_020152 Daucus carota HOM05D003400 ORTHO05D003687 5.8e-23 112.8 352 31.5
BraA02t04839Z Brassica rapa HOM05D003400 ORTHO05D003687 2.2e-22 110.9 315 30.5
THA.LOC104813796 Tarenaya hassleriana HOM05D003400 ORTHO05D003687 2.2e-22 110.9 301 31.9
A03p22840 Brassica napus HOM05D003400 ORTHO05D003687 3.8e-22 110.2 349 30.4
Sp4g22960 Schrenkiella parvula HOM05D003400 ORTHO05D003687 3.8e-22 110.2 329 31.6
C03p27090 Brassica napus HOM05D003400 ORTHO05D003687 6.5e-22 109.4 344 30.8
BcaC01g05391 Brassica carinata HOM05D003400 ORTHO05D003687 2.5e-21 107.5 344 30.5
Sc14g0005640 Simmondsia chinensis HOM05D003400 ORTHO05D003687 5.5e-21 106.3 268 34.0
Thhalv10016481m.g Eutrema salsugineum HOM05D003400 ORTHO05D003687 1.2e-20 105.1 361 31.9
AT2G40630 Arabidopsis thaliana HOM05D003400 ORTHO05D003687 2.7e-20 104.0 337 32.0
AL4G38500 Arabidopsis lyrata HOM05D003400 ORTHO05D003687 7.9e-20 102.4 350 29.7
unitig_37.g12474 Utricularia gibba HOM05D003400 ORTHO05D003687 1.8e-19 101.3 311 31.8
Carub.0004s2292 Capsella rubella HOM05D003400 ORTHO05D003687 3.9e-19 100.1 324 30.2
HPP92_024977 Vanilla planifolia HOM05D003400 ORTHO05D003687 1.5e-18 98.2 330 28.8
Sabra13G0126600 Salix brachista HOM05D003400 ORTHO05D003687 9.7e-18 95.5 288 33.7
ATR1127G045 Amborella trichopoda HOM05D003400 ORTHO05D003687 8.2e-17 92.4 357 28.9
BcaB01g03526 Brassica carinata HOM05D003400 ORTHO05D003687 1.8e-16 91.3 351 29.3
Actinidia01001 Actinidia chinensis HOM05D003400 ORTHO05D003687 9.0e-16 89.0 228 36.0
Aqoxy2G00693 Aquilegia oxysepala HOM05D003400 ORTHO05D003687 1.5e-15 88.2 324 29.0
BcaC06g32234 Brassica carinata HOM05D003400 ORTHO05D003687 3.4e-15 87.0 155 39.4
BraA03t11508Z Brassica rapa HOM05D003400 ORTHO05D003687 3.8e-14 83.6 337 29.7
TAR636G2149 Trochodendron aralioides HOM05D003400 ORTHO05D003687 1.1e-13 82.0 93 49.5
BcaB06g29158 Brassica carinata HOM05D003400 ORTHO05D003687 5.5e-13 79.7 302 27.5
Oeu006054.1 Olea europaea HOM05D003400 ORTHO05D003687 9.4e-13 79.0 226 35.4
MSTRG.8378 Avicennia marina HOM05D003400 ORTHO05D003687 6.1e-12 76.3 123 37.4
BolC4t28345H Brassica oleracea HOM05D003400 ORTHO05D003687 7.9e-12 75.9 367 23.2
Zm00001eb209040 Zea mays HOM05D003400 ORTHO05D003687 1.4e-11 75.1 168 32.7
BcaC02g07326 Brassica carinata HOM05D003400 ORTHO05D003687 1.8e-11 74.7 362 23.2
BraA04t18562Z Brassica rapa HOM05D003400 ORTHO05D003687 2.5e-10 70.9 298 25.5
HanXRQChr09g0252221 Helianthus annuus HOM05D003400 ORTHO05D003687 1.3e-09 68.6 155 36.8
SEGI_16914 Sequoiadendron giganteum HOM05D003400 ORTHO05D003687 2.2e-09 67.8 324 23.8
Actinidia01000 Actinidia chinensis HOM05D003400 ORTHO05D003687 2.6e-07 60.8 88 44.3
Mapoly0081s0073 Marchantia polymorpha HOM05D003400 ORTHO05D003687 3.4e-07 60.5 412 25.2
A04p31060 Brassica napus HOM05D003400 ORTHO05D003687 5.0e-06 56.6 199 27.6
unitig_46.g18748 Utricularia gibba HOM05D003400 ORTHO05D003687 6.5e-06 56.2 117 31.6


User provided reference genes

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