Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_24381 Corylus avellana HOM05D006841 ORTHO05D008607 2.4e-306 1054.7 536 100.0
CiPaw.14G056400 Carya illinoinensis HOM05D006841 ORTHO05D008607 2.0e-239 832.4 536 80.2
CiPaw.13G073200 Carya illinoinensis HOM05D006841 ORTHO05D008607 2.7e-228 795.4 540 77.2
QL01p039597 Quercus lobata HOM05D006841 ORTHO05D008607 9.8e-215 750.4 551 73.7
Prupe.6G052600 Prunus persica HOM05D006841 ORTHO05D008607 1.0e-211 740.3 539 73.1
Potri.009G075200 Populus trichocarpa HOM05D006841 ORTHO05D008607 6.2e-209 731.1 539 71.4
Thecc.09G353800 Theobroma cacao HOM05D006841 ORTHO05D008607 8.0e-209 730.7 543 70.9
MD03G1062600 Malus domestica HOM05D006841 ORTHO05D008607 1.3e-206 723.4 539 71.1
TAR369G0096 Trochodendron aralioides HOM05D006841 ORTHO05D008607 1.3e-206 723.4 536 72.0
Atru.chr3.4145 Acer truncatum HOM05D006841 ORTHO05D008607 1.7e-206 723.0 535 70.8
Sabra09G0057100 Salix brachista HOM05D006841 ORTHO05D008607 4.9e-206 721.5 539 70.9
CSS0042618 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 6.4e-206 721.1 541 69.9
COL.COLO4_11072 Corchorus olitorius HOM05D006841 ORTHO05D008607 8.3e-206 720.7 546 70.0
Dinv28672 Davidia involucrata HOM05D006841 ORTHO05D008607 1.4e-205 719.9 527 72.3
Ciclev10028251m.g Citrus clementina HOM05D006841 ORTHO05D008607 4.1e-205 718.4 531 71.8
RcHm_v2.0_Chr5g0070721 Rosa chinensis HOM05D006841 ORTHO05D008607 1.2e-204 716.8 541 70.6
arahy.Tifrunner.gnm1.ann1.1QT3IR Arachis hypogaea HOM05D006841 ORTHO05D008607 1.6e-204 716.5 537 70.8
MD11G1066200 Malus domestica HOM05D006841 ORTHO05D008607 6.0e-204 714.5 539 70.3
arahy.Tifrunner.gnm1.ann1.UR06JS Arachis hypogaea HOM05D006841 ORTHO05D008607 1.0e-203 713.8 537 70.2
Gorai.009G112400 Gossypium raimondii HOM05D006841 ORTHO05D008607 5.0e-203 711.4 543 69.4
Duzib170G1072 Durio zibethinus HOM05D006841 ORTHO05D008607 1.5e-202 709.9 543 69.1
Actinidia34467 Actinidia chinensis HOM05D006841 ORTHO05D008607 1.9e-202 709.5 542 68.6
Glyma.18G059800 Glycine max HOM05D006841 ORTHO05D008607 2.5e-202 709.1 543 69.8
Gohir.A05G108000 Gossypium hirsutum HOM05D006841 ORTHO05D008607 2.5e-202 709.1 543 68.9
TAR636G1839 Trochodendron aralioides HOM05D006841 ORTHO05D008607 9.5e-202 707.2 541 69.1
FAN11G0941 Fragaria x ananassa HOM05D006841 ORTHO05D008607 1.2e-201 706.8 520 71.7
Phvul.006G071400 Phaseolus vulgaris HOM05D006841 ORTHO05D008607 1.2e-201 706.8 544 69.7
Glyma.11G167300 Glycine max HOM05D006841 ORTHO05D008607 1.6e-201 706.4 545 69.7
FvH4_3g39290 Fragaria vesca HOM05D006841 ORTHO05D008607 2.1e-201 706.1 520 71.7
PGR102G0989 Punica granatum HOM05D006841 ORTHO05D008607 2.1e-201 706.1 542 68.8
Duzib168G0722 Durio zibethinus HOM05D006841 ORTHO05D008607 2.8e-201 705.7 543 68.7
FAN25G3694 Fragaria x ananassa HOM05D006841 ORTHO05D008607 6.2e-201 704.5 520 71.5
Gohir.D05G108200 Gossypium hirsutum HOM05D006841 ORTHO05D008607 6.2e-201 704.5 543 68.7
Eucgr.B02230 Eucalyptus grandis HOM05D006841 ORTHO05D008607 6.8e-200 701.0 544 68.4
Manes.02G217600 Manihot esculenta HOM05D006841 ORTHO05D008607 1.5e-199 699.9 547 69.1
CANSAT54G0320 Cannabis sativa HOM05D006841 ORTHO05D008607 7.5e-199 697.6 547 68.4
CsaV3_6G016010 Cucumis sativus L. HOM05D006841 ORTHO05D008607 7.5e-199 697.6 538 67.8
FAN21G2904 Fragaria x ananassa HOM05D006841 ORTHO05D008607 9.8e-199 697.2 520 71.0
MELO3C026835.2 Cucumis melo HOM05D006841 ORTHO05D008607 2.1e-196 689.5 538 66.9
CSS0014141 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 6.0e-196 688.0 541 67.5
ClCG02G019390 Citrullus lanatus HOM05D006841 ORTHO05D008607 1.0e-195 687.2 543 66.1
Lalb_Chr18g0051231 Lupinus albus HOM05D006841 ORTHO05D008607 1.5e-194 683.3 542 67.0
Lj6g0024894 Lotus japonicus HOM05D006841 ORTHO05D008607 4.3e-194 681.8 547 66.7
Sed0019546 Sechium edule HOM05D006841 ORTHO05D008607 3.6e-193 678.7 543 65.0
TWI79G1747 Tripterygium wilfordii HOM05D006841 ORTHO05D008607 8.1e-193 677.6 544 67.8
vmacro14612 Vaccinium macrocarpon HOM05D006841 ORTHO05D008607 1.5e-191 673.3 541 65.8
SalBow2G2391 Salvia bowleyana HOM05D006841 ORTHO05D008607 9.9e-191 670.6 511 67.9
TPR.G32925 Trifolium pratense HOM05D006841 ORTHO05D008607 6.4e-190 667.9 541 66.2
Medtr3g465390 Medicago truncatula HOM05D006841 ORTHO05D008607 1.9e-189 666.4 547 65.4
Rhsim01G0239400 Rhododendron simsii HOM05D006841 ORTHO05D008607 9.2e-189 664.1 541 65.8
MSTRG.12683 Avicennia marina HOM05D006841 ORTHO05D008607 1.3e-187 660.2 483 70.0
VMungo0540G0160 Vigna mungo HOM05D006841 ORTHO05D008607 5.1e-187 658.3 520 68.1
Oeu018490.1 Olea europaea HOM05D006841 ORTHO05D008607 7.3e-186 654.4 517 67.5
Psat5g157440 Pisum sativum HOM05D006841 ORTHO05D008607 9.6e-186 654.1 544 64.3
Solyc05g012140.3 Solanum lycopersicum HOM05D006841 ORTHO05D008607 1.2e-185 653.7 524 67.0
Sopen05g006930 Solanum pennellii HOM05D006841 ORTHO05D008607 1.6e-185 653.3 524 67.2
Sc06g0008150 Simmondsia chinensis HOM05D006841 ORTHO05D008607 3.6e-185 652.1 539 63.3
PGSC0003DMG401028313 Solanum tuberosum HOM05D006841 ORTHO05D008607 3.1e-184 649.0 504 68.7
HanXRQChr01g0011601 Helianthus annuus HOM05D006841 ORTHO05D008607 8.4e-182 641.0 474 69.2
Peaxi162Scf01324g00238 Petunia axillaris HOM05D006841 ORTHO05D008607 1.1e-181 640.6 479 68.9
CAN.G707.10 Capsicum annuum HOM05D006841 ORTHO05D008607 1.9e-181 639.8 483 68.9
EL10Ac7g15887 Beta vulgaris HOM05D006841 ORTHO05D008607 1.0e-179 634.0 538 62.3
Migut.N00773 Erythranthe guttata HOM05D006841 ORTHO05D008607 1.7e-179 633.3 476 69.1
Lj2A1088G41 Lonicera japonica HOM05D006841 ORTHO05D008607 5.1e-179 631.7 450 73.1
Aqoxy1G01268 Aquilegia oxysepala HOM05D006841 ORTHO05D008607 8.7e-179 630.9 507 65.3
Hund05042 Selenicereus undatus HOM05D006841 ORTHO05D008607 1.6e-177 626.7 478 65.7
Aa31LG5G6580 Aethionema arabicum HOM05D006841 ORTHO05D008607 1.4e-176 623.6 543 60.8
AUR62009700 Chenopodium quinoa HOM05D006841 ORTHO05D008607 1.5e-175 620.2 539 61.2
Lsat_1_v5_gn_5_173260 Lactuca sativa HOM05D006841 ORTHO05D008607 4.5e-175 618.6 473 67.2
THA.LOC104800754 Tarenaya hassleriana HOM05D006841 ORTHO05D008607 9.9e-175 617.5 542 60.9
Ca_14982_v3 Cicer arietinum L. HOM05D006841 ORTHO05D008607 2.2e-174 616.3 517 64.6
AUR62036246 Chenopodium quinoa HOM05D006841 ORTHO05D008607 6.4e-174 614.8 539 60.9
Ah.15g096690 Amaranthus hybridus HOM05D006841 ORTHO05D008607 1.4e-173 613.6 489 63.8
PSO017G2874 Papaver somniferum HOM05D006841 ORTHO05D008607 2.3e-171 606.3 548 60.0
ECA248G2088 Erigeron canadensis HOM05D006841 ORTHO05D008607 3.0e-171 605.9 446 69.7
Ah.08g215320 Amaranthus hybridus HOM05D006841 ORTHO05D008607 1.1e-170 604.0 540 59.6
Thhalv10016546m.g Eutrema salsugineum HOM05D006841 ORTHO05D008607 4.3e-170 602.1 548 59.9
PSO349G0316 Papaver somniferum HOM05D006841 ORTHO05D008607 9.6e-170 600.9 550 59.8
Carub.0004s1120 Capsella rubella HOM05D006841 ORTHO05D008607 1.6e-169 600.1 544 58.6
AT2G30100 Arabidopsis thaliana HOM05D006841 ORTHO05D008607 6.2e-169 598.2 546 58.2
unitig_94.g28363 Utricularia gibba HOM05D006841 ORTHO05D008607 3.1e-168 595.9 472 64.6
MBI15_g21765_MAGBIO Magnolia biondii HOM05D006841 ORTHO05D008607 1.2e-167 594.0 540 58.7
AL4G24870 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 5.8e-167 591.7 530 59.1
CARHR123400 Cardamine hirsuta HOM05D006841 ORTHO05D008607 9.9e-167 590.9 543 58.2
Sp4g12660 Schrenkiella parvula HOM05D006841 ORTHO05D008607 4.2e-165 585.5 540 59.1
C04p58980 Brassica napus HOM05D006841 ORTHO05D008607 1.5e-162 577.0 544 57.5
A04p22780 Brassica napus HOM05D006841 ORTHO05D008607 2.5e-162 576.2 546 57.1
BraA04t17817Z Brassica rapa HOM05D006841 ORTHO05D008607 7.4e-162 574.7 548 56.8
BolC4t27410H Brassica oleracea HOM05D006841 ORTHO05D008607 1.3e-161 573.9 544 57.7
SGA_v2.0_scaffold104G30129 Striga asiatica HOM05D006841 ORTHO05D008607 3.4e-159 565.8 480 62.5
BcaC02g08056 Brassica carinata HOM05D006841 ORTHO05D008607 2.5e-157 559.7 538 57.1
CDE06G2104 Ceratophyllum demersum HOM05D006841 ORTHO05D008607 2.5e-157 559.7 478 60.0
GSVIVG01024686001 Vitis vinifera HOM05D006841 ORTHO05D008607 7.9e-156 554.7 411 72.3
Cc01_g14600 Coffea canephora HOM05D006841 ORTHO05D008607 3.7e-153 545.8 428 68.7
DCAR_007349 Daucus carota HOM05D006841 ORTHO05D008607 4.2e-149 532.3 384 70.8
Zm00001eb286480 Zea mays HOM05D006841 ORTHO05D008607 5.5e-141 505.4 452 58.8
Os05g0353300 Oryza sativa ssp. japonica HOM05D006841 ORTHO05D008607 3.9e-139 499.2 486 54.5
ATR0174G035 Amborella trichopoda HOM05D006841 ORTHO05D008607 3.6e-132 476.1 457 54.5
AL59U10050 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 8.0e-124 448.4 467 55.0
Actinidia23875 Actinidia chinensis HOM05D006841 ORTHO05D008607 1.2e-119 434.5 321 70.1
Hma1.2p1_0146F.1_g065520 Hydrangea macrophylla HOM05D006841 ORTHO05D008607 1.4e-112 411.0 257 78.6
HPP92_025104 Vanilla planifolia HOM05D006841 ORTHO05D008607 3.4e-106 389.8 445 50.1
SEGI_38470 Sequoiadendron giganteum HOM05D006841 ORTHO05D008607 7.0e-104 382.1 454 43.8
CSS0012316 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 3.2e-88 330.1 453 46.1
Mapoly0068s0098 Marchantia polymorpha HOM05D006841 ORTHO05D008607 1.3e-86 324.7 458 40.8
Nn2g10947 Nelumbo nucifera HOM05D006841 ORTHO05D008607 1.7e-78 297.7 257 63.0
Nn2g13216 Nelumbo nucifera HOM05D006841 ORTHO05D008607 8.1e-76 288.9 272 59.2
Cpa.g.sc2.394 Carica papaya HOM05D006841 ORTHO05D008607 2.7e-63 247.3 155 78.1
Pp3c12_8330 Physcomitrium patens HOM05D006841 ORTHO05D008607 2.7e-63 247.3 464 34.5
SMO304G0125 Selaginella moellendorffii HOM05D006841 ORTHO05D008607 1.3e-57 228.4 508 31.1
MD11G1194000 Malus domestica HOM05D006841 ORTHO05D008607 4.2e-56 223.4 153 72.5
Oeu034210.1 Olea europaea HOM05D009051 ORTHO05D000140 5.3e-51 206.5 171 62.6
Oeu034517.1 Olea europaea HOM05D006841 ORTHO05D008607 1.9e-37 161.4 228 45.6
Oeu034513.1 Olea europaea HOM05D006841 ORTHO05D008607 3.3e-37 160.6 228 44.3
Oeu034514.1 Olea europaea HOM05D006841 ORTHO05D008607 3.0e-30 137.5 139 54.0
AagrBONN_evm.TU.Sc2ySwM_117.787 Anthoceros agrestis HOM05D006841 ORTHO05D008607 1.3e-28 132.1 152 45.4
Oeu034518.1 Olea europaea HOM05D006841 ORTHO05D008607 8.2e-28 129.4 130 54.6
VMungo0331G0799 Vigna mungo HOM05D000172 ORTHO05D004529 5.9e-26 123.2 96 66.7
Oeu019495.1 Olea europaea HOM05D006841 ORTHO05D008607 1.3e-17 95.5 143 39.9


User provided reference genes

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