Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_24363 Corylus avellana HOM05D006252 ORTHO05D007909 3.5e-83 311.6 163 100.0
Cfa010288 Carpinus fangiana HOM05D006252 ORTHO05D007909 1.4e-47 193.4 105 98.1
Cpa.g.sc47.1 Carica papaya HOM05D006252 ORTHO05D007909 2.2e-45 186.0 105 94.3
CiPaw.13G122300 Carya illinoinensis HOM05D006252 ORTHO05D007909 5.0e-45 184.9 105 93.3
QL01p014977 Quercus lobata HOM05D006252 ORTHO05D007909 4.2e-44 181.8 104 91.3
Manes.11G152500 Manihot esculenta HOM05D006252 ORTHO05D007909 5.5e-44 181.4 105 90.5
GSVIVG01031460001 Vitis vinifera HOM05D006252 ORTHO05D007909 5.5e-44 181.4 105 89.5
Thecc.09G298300 Theobroma cacao HOM05D006252 ORTHO05D007909 7.2e-44 181.0 105 89.5
Gohir.A05G086700 Gossypium hirsutum HOM05D006252 ORTHO05D007909 2.7e-43 179.1 105 88.6
MBI02_g05768_MAGBIO Magnolia biondii HOM05D006252 ORTHO05D007909 2.7e-43 179.1 105 89.5
Nn6g35212 Nelumbo nucifera HOM05D006252 ORTHO05D007909 2.7e-43 179.1 105 89.5
Gohir.D05G088000 Gossypium hirsutum HOM05D006252 ORTHO05D007909 3.6e-43 178.7 105 88.6
Gorai.009G090100 Gossypium raimondii HOM05D006252 ORTHO05D007909 3.6e-43 178.7 105 88.6
CSS0004051 Camellia sinensis var. sinensis HOM05D006252 ORTHO05D007909 6.1e-43 177.9 105 89.5
CSS0044427 Camellia sinensis var. sinensis HOM05D006252 ORTHO05D007909 6.1e-43 177.9 105 89.5
Potri.004G217000 Populus trichocarpa HOM05D006252 ORTHO05D007909 6.1e-43 177.9 105 87.6
Atru.chr3.3505 Acer truncatum HOM05D006252 ORTHO05D007909 8.0e-43 177.6 105 88.6
CDE08G0788 Ceratophyllum demersum HOM05D006252 ORTHO05D007909 8.0e-43 177.6 105 87.6
Thhalv10002672m.g Eutrema salsugineum HOM05D006252 ORTHO05D007909 8.0e-43 177.6 105 85.7
Hma1.2p1_0051F.1_g029510 Hydrangea macrophylla HOM05D006252 ORTHO05D007909 1.4e-42 176.8 105 85.7
Sabra04G0147700 Salix brachista HOM05D006252 ORTHO05D007909 1.4e-42 176.8 106 85.8
MSTRG.18705 Avicennia marina HOM05D006252 ORTHO05D007909 1.8e-42 176.4 105 86.7
CDE02G0854 Ceratophyllum demersum HOM05D006252 ORTHO05D007909 1.8e-42 176.4 105 86.7
COL.COLO4_19198 Corchorus olitorius HOM05D006252 ORTHO05D007909 1.8e-42 176.4 105 87.6
SalBow6G6884 Salvia bowleyana HOM05D006252 ORTHO05D007909 1.8e-42 176.4 105 87.6
AL5G23350 Arabidopsis lyrata HOM05D006252 ORTHO05D007909 3.0e-42 175.6 105 84.8
PGR102G1698 Punica granatum HOM05D006252 ORTHO05D007909 3.0e-42 175.6 105 85.7
Glyma.11G192500 Glycine max HOM05D006252 ORTHO05D007909 4.0e-42 175.3 105 86.7
Glyma.12G081500 Glycine max HOM05D006252 ORTHO05D007909 4.0e-42 175.3 105 86.7
Actinidia07187 Actinidia chinensis HOM05D006252 ORTHO05D007909 5.2e-42 174.9 105 87.6
ATR0043G002 Amborella trichopoda HOM05D006252 ORTHO05D007909 5.2e-42 174.9 105 86.7
Ciclev10029219m.g Citrus clementina HOM05D006252 ORTHO05D007909 5.2e-42 174.9 105 85.7
Cc08_g04460 Coffea canephora HOM05D006252 ORTHO05D007909 5.2e-42 174.9 105 87.6
THA.LOC104810882 Tarenaya hassleriana HOM05D006252 ORTHO05D007909 5.2e-42 174.9 105 83.8
Peaxi162Scf00983g00015 Petunia axillaris HOM05D006252 ORTHO05D007909 8.8e-42 174.1 105 85.7
Sabra09G0002100 Salix brachista HOM05D006252 ORTHO05D007909 8.8e-42 174.1 105 86.7
Sed0008981 Sechium edule HOM05D006252 ORTHO05D007909 1.5e-41 173.3 105 84.8
Solyc11g066410.2 Solanum lycopersicum HOM05D006252 ORTHO05D007909 1.5e-41 173.3 105 83.8
Cc01_g10250 Coffea canephora HOM05D006252 ORTHO05D007909 2.0e-41 172.9 105 87.6
Lj3g0021853 Lotus japonicus HOM05D006252 ORTHO05D007909 2.6e-41 172.6 105 84.8
BcaB05g23061 Brassica carinata HOM05D006252 ORTHO05D007909 3.4e-41 172.2 105 84.8
BcaC09g49661 Brassica carinata HOM05D006252 ORTHO05D007909 3.4e-41 172.2 105 84.8
C01p34110 Brassica napus HOM05D006252 ORTHO05D007909 3.4e-41 172.2 105 84.8
BolC1t03381H Brassica oleracea HOM05D006252 ORTHO05D007909 3.4e-41 172.2 105 84.8
ClCG03G002460 Citrullus lanatus HOM05D006252 ORTHO05D007909 3.4e-41 172.2 105 84.8
MELO3C004995.2 Cucumis melo HOM05D006252 ORTHO05D007909 3.4e-41 172.2 105 84.8
Lalb_Chr19g0136901 Lupinus albus HOM05D006252 ORTHO05D007909 3.4e-41 172.2 105 84.8
VMungo1127G0830 Vigna mungo HOM05D006252 ORTHO05D007909 3.4e-41 172.2 105 85.7
arahy.Tifrunner.gnm1.ann1.4A8W5C Arachis hypogaea HOM05D006252 ORTHO05D007909 4.4e-41 171.8 105 85.7
arahy.Tifrunner.gnm1.ann1.Q498P0 Arachis hypogaea HOM05D006252 ORTHO05D007909 4.4e-41 171.8 105 85.7
CsaV3_1G013140 Cucumis sativus L. HOM05D006252 ORTHO05D007909 4.4e-41 171.8 105 83.8
Sopen11g026160 Solanum pennellii HOM05D006252 ORTHO05D007909 4.4e-41 171.8 105 83.8
PGSC0003DMG400000456 Solanum tuberosum HOM05D006252 ORTHO05D007909 4.4e-41 171.8 105 82.9
TAR633G0073 Trochodendron aralioides HOM05D006252 ORTHO05D007909 4.4e-41 171.8 105 85.7
HPP92_003365 Vanilla planifolia HOM05D006252 ORTHO05D007909 7.5e-41 171.0 105 82.9
Aqoxy1G01090 Aquilegia oxysepala HOM05D006252 ORTHO05D007909 1.3e-40 170.2 105 83.8
Sp5g16320 Schrenkiella parvula HOM05D006252 ORTHO05D007909 1.3e-40 170.2 105 82.9
SGA_v2.0_scaffold277G46698 Striga asiatica HOM05D006252 ORTHO05D007909 1.3e-40 170.2 105 82.9
A01p26720 Brassica napus HOM05D006252 ORTHO05D007909 1.7e-40 169.9 105 83.8
BraA01t02602Z Brassica rapa HOM05D006252 ORTHO05D007909 1.7e-40 169.9 105 83.8
AUR62014977 Chenopodium quinoa HOM05D006252 ORTHO05D007909 1.7e-40 169.9 105 83.8
ECA233G2302 Erigeron canadensis HOM05D006252 ORTHO05D007909 1.7e-40 169.9 105 83.8
Migut.D02295 Erythranthe guttata HOM05D006252 ORTHO05D007909 2.2e-40 169.5 105 83.8
PSO063G5667 Papaver somniferum HOM05D006252 ORTHO05D007909 2.2e-40 169.5 105 83.8
Phvul.011G086500 Phaseolus vulgaris HOM05D006252 ORTHO05D007909 2.8e-40 169.1 105 83.8
AUR62029150 Chenopodium quinoa HOM05D006252 ORTHO05D007909 3.7e-40 168.7 105 82.9
Ca_19323_v3 Cicer arietinum L. HOM05D006252 ORTHO05D007909 3.7e-40 168.7 105 82.9
HanXRQChr02g0055341 Helianthus annuus HOM05D006252 ORTHO05D007909 3.7e-40 168.7 105 83.8
CARHR151120 Cardamine hirsuta HOM05D006252 ORTHO05D007909 6.3e-40 167.9 105 80.0
Aa31LG4G14200 Aethionema arabicum HOM05D006252 ORTHO05D007909 8.3e-40 167.5 105 80.0
AT3G44890 Arabidopsis thaliana HOM05D006252 ORTHO05D007909 8.3e-40 167.5 105 79.0
PSO339G3106 Papaver somniferum HOM05D006252 ORTHO05D007909 8.3e-40 167.5 105 81.9
Lalb_Chr03g0027721 Lupinus albus HOM05D006252 ORTHO05D007909 1.1e-39 167.2 105 81.0
Psat7g223760 Pisum sativum HOM05D006252 ORTHO05D007909 1.1e-39 167.2 105 82.9
EL10Ac9g22626 Beta vulgaris HOM05D006252 ORTHO05D007909 1.4e-39 166.8 105 82.9
Carub.0005s1063 Capsella rubella HOM05D006252 ORTHO05D007909 1.4e-39 166.8 105 79.0
vmacro14388 Vaccinium macrocarpon HOM05D006252 ORTHO05D007909 1.4e-39 166.8 105 80.0
Lj2A1006G34 Lonicera japonica HOM05D006252 ORTHO05D007909 2.4e-39 166.0 105 81.9
Nitab4.5_0005665g0020 Nicotiana tabacum HOM05D006252 ORTHO05D007909 2.4e-39 166.0 105 81.9
TWI75G0936 Tripterygium wilfordii HOM05D006252 ORTHO05D007909 3.1e-39 165.6 105 82.9
TWI79G1340 Tripterygium wilfordii HOM05D006252 ORTHO05D007909 3.1e-39 165.6 105 81.0
TPR.G36832 Trifolium pratense HOM05D006252 ORTHO05D007909 5.3e-39 164.9 105 81.9
RcHm_v2.0_Chr5g0056671 Rosa chinensis HOM05D006252 ORTHO05D007909 7.0e-39 164.5 105 83.8
unitig_746.g26615 Utricularia gibba HOM05D006252 ORTHO05D007909 7.0e-39 164.5 105 81.0
FvH4_3g30600 Fragaria vesca HOM05D006252 ORTHO05D007909 9.1e-39 164.1 105 82.9
FAN11G0619 Fragaria x ananassa HOM05D006252 ORTHO05D007909 9.1e-39 164.1 105 82.9
FAN16G0084 Fragaria x ananassa HOM05D006252 ORTHO05D007909 9.1e-39 164.1 105 82.9
FAN21G1285 Fragaria x ananassa HOM05D006252 ORTHO05D007909 9.1e-39 164.1 105 82.9
FAN25G2218 Fragaria x ananassa HOM05D006252 ORTHO05D007909 9.1e-39 164.1 105 82.9
Rhsim01G0210400 Rhododendron simsii HOM05D006252 ORTHO05D007909 4.5e-38 161.8 105 78.1
Medtr4g057210 Medicago truncatula HOM05D006252 ORTHO05D007909 1.3e-37 160.2 105 80.0
Lsat_1_v5_gn_6_43381 Lactuca sativa HOM05D006252 ORTHO05D007909 1.7e-37 159.8 99 82.8
Prupe.6G113200 Prunus persica HOM05D006252 ORTHO05D007909 1.7e-37 159.8 105 80.0
Hund01525 Selenicereus undatus HOM05D006252 ORTHO05D007909 6.5e-37 157.9 98 83.7
Zm00001eb258190 Zea mays HOM05D006252 ORTHO05D007909 6.5e-37 157.9 105 74.3
Nitab4.5_0000173g0140 Nicotiana tabacum HOM05D006252 ORTHO05D007909 8.5e-37 157.5 97 83.5
MD03G1128600 Malus domestica HOM05D006252 ORTHO05D007909 1.5e-36 156.8 105 79.0
Oeu007732.1 Olea europaea HOM05D006252 ORTHO05D007909 1.5e-36 156.8 94 86.2
arahy.Tifrunner.gnm1.ann1.151HRH Arachis hypogaea HOM05D006252 ORTHO05D007909 1.9e-36 156.4 103 79.6
MD11G1148800 Malus domestica HOM05D006252 ORTHO05D007909 5.5e-36 154.8 105 78.1
arahy.Tifrunner.gnm1.ann1.RBN82M Arachis hypogaea HOM05D006252 ORTHO05D007909 2.6e-33 146.0 103 75.7
Dinv16227 Davidia involucrata HOM05D006252 ORTHO05D007909 2.0e-30 136.3 80 90.0
Mapoly0005s0034 Marchantia polymorpha HOM05D006252 ORTHO05D007909 8.6e-29 131.0 105 60.0
AagrBONN_evm.TU.Sc2ySwM_362.2261 Anthoceros agrestis HOM05D006252 ORTHO05D007909 1.5e-28 130.2 99 60.6
arahy.Tifrunner.gnm1.ann1.EI3IVH Arachis hypogaea HOM05D006252 ORTHO05D007909 1.2e-27 127.1 90 75.6
Actinidia24149 Actinidia chinensis HOM05D006252 ORTHO05D007909 1.2e-25 120.6 104 65.4
SEGI_37172 Sequoiadendron giganteum HOM05D006252 ORTHO05D007909 7.5e-25 117.9 85 67.1
CBR_g36656 Chara braunii HOM05D006252 ORTHO05D007909 9.8e-25 117.5 102 54.9
arahy.Tifrunner.gnm1.ann1.8D185T Arachis hypogaea HOM05D006252 ORTHO05D005826 2.4e-23 112.8 71 81.7
Thhalv10023194m.g Eutrema salsugineum HOM05D006252 ORTHO05D007909 5.9e-22 108.2 64 87.5
Pp3c2_34110 Physcomitrium patens HOM05D006252 ORTHO05D007909 5.9e-22 108.2 100 55.0
Pp3c2_34120 Physcomitrium patens HOM05D006252 ORTHO05D007909 5.9e-22 108.2 100 55.0
Pp3c1_5300 Physcomitrium patens HOM05D006252 ORTHO05D007909 2.5e-20 102.8 100 52.0
Pp3c1_5320 Physcomitrium patens HOM05D006252 ORTHO05D007909 2.5e-20 102.8 100 52.0
SMO118G0111 Selaginella moellendorffii HOM05D006252 ORTHO05D007909 8.9e-18 94.4 105 43.8
arahy.Tifrunner.gnm1.ann1.KIT0HG Arachis hypogaea HOM05D006252 ORTHO05D007909 2.2e-16 89.7 88 58.0
Sc21g0000330 Simmondsia chinensis HOM05D006252 ORTHO05D007909 3.3e-12 75.9 48 81.2
MCO03G269 Micromonas commoda HOM05D006252 ORTHO05D007909 1.2e-11 73.9 78 41.0
arahy.Tifrunner.gnm1.ann1.TR51Z4 Arachis hypogaea HOM05D006252 ORTHO05D007909 4.4e-09 65.5 44 68.2
Cre12.g556050 Chlamydomonas reinhardtii HOM05D006252 ORTHO05D007909 7.5e-09 64.7 93 36.6
arahy.Tifrunner.gnm1.ann1.LGS4T1 Arachis hypogaea HOM05D006252 ORTHO05D007909 1.9e-07 60.1 48 66.7


User provided reference genes

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