Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_24362 Corylus avellana HOM05D006252 ORTHO05D007909 5.0e-42 174.1 92 100.0
Cfa010288 Carpinus fangiana HOM05D006252 ORTHO05D007909 1.9e-41 172.2 91 98.9
CiPaw.13G122300 Carya illinoinensis HOM05D006252 ORTHO05D007909 7.2e-33 143.7 92 83.7
QL01p014977 Quercus lobata HOM05D006252 ORTHO05D007909 1.8e-31 139.0 92 80.4
MD03G1128600 Malus domestica HOM05D006252 ORTHO05D007909 8.8e-31 136.7 92 79.3
MD11G1148800 Malus domestica HOM05D006252 ORTHO05D007909 1.2e-30 136.3 92 79.3
TAR633G0073 Trochodendron aralioides HOM05D006252 ORTHO05D007909 1.7e-29 132.5 92 75.0
Manes.11G152500 Manihot esculenta HOM05D006252 ORTHO05D007909 1.1e-28 129.8 90 75.6
Prupe.6G113200 Prunus persica HOM05D006252 ORTHO05D007909 1.8e-28 129.0 92 76.1
RcHm_v2.0_Chr5g0056671 Rosa chinensis HOM05D006252 ORTHO05D007909 2.4e-28 128.6 92 76.1
Hma1.2p1_0051F.1_g029510 Hydrangea macrophylla HOM05D006252 ORTHO05D007909 4.1e-28 127.9 94 74.5
CSS0004051 Camellia sinensis var. sinensis HOM05D006252 ORTHO05D007909 1.2e-27 126.3 94 73.4
CSS0044427 Camellia sinensis var. sinensis HOM05D006252 ORTHO05D007909 1.2e-27 126.3 94 73.4
Cpa.g.sc47.1 Carica papaya HOM05D006252 ORTHO05D007909 2.7e-27 125.2 91 74.7
FAN16G0084 Fragaria x ananassa HOM05D006252 ORTHO05D007909 5.9e-27 124.0 92 72.8
FAN21G1285 Fragaria x ananassa HOM05D006252 ORTHO05D007909 7.7e-27 123.6 92 72.8
FvH4_3g30600 Fragaria vesca HOM05D006252 ORTHO05D007909 1.0e-26 123.2 92 72.8
FAN11G0619 Fragaria x ananassa HOM05D006252 ORTHO05D007909 1.0e-26 123.2 92 72.8
Atru.chr3.3505 Acer truncatum HOM05D006252 ORTHO05D007909 1.3e-26 122.9 91 72.5
CsaV3_1G013140 Cucumis sativus L. HOM05D006252 ORTHO05D007909 2.2e-26 122.1 95 69.5
Ciclev10029219m.g Citrus clementina HOM05D006252 ORTHO05D007909 3.8e-26 121.3 91 70.3
FAN25G2218 Fragaria x ananassa HOM05D006252 ORTHO05D007909 3.8e-26 121.3 92 70.7
PGR102G1698 Punica granatum HOM05D006252 ORTHO05D007909 5.0e-26 120.9 93 71.0
Nn6g35212 Nelumbo nucifera HOM05D006252 ORTHO05D007909 8.5e-26 120.2 93 71.0
Thecc.09G298300 Theobroma cacao HOM05D006252 ORTHO05D007909 1.9e-25 119.0 90 70.0
ClCG03G002460 Citrullus lanatus HOM05D006252 ORTHO05D007909 4.2e-25 117.9 95 68.4
MELO3C004995.2 Cucumis melo HOM05D006252 ORTHO05D007909 5.5e-25 117.5 95 67.4
Gorai.009G090100 Gossypium raimondii HOM05D006252 ORTHO05D007909 2.7e-24 115.2 91 65.9
Cc01_g10250 Coffea canephora HOM05D006252 ORTHO05D007909 4.7e-24 114.4 95 68.4
Sabra09G0002100 Salix brachista HOM05D006252 ORTHO05D007909 4.7e-24 114.4 91 65.9
TWI79G1340 Tripterygium wilfordii HOM05D006252 ORTHO05D007909 4.7e-24 114.4 87 67.8
Gohir.D05G088000 Gossypium hirsutum HOM05D006252 ORTHO05D007909 8.0e-24 113.6 91 64.8
COL.COLO4_19198 Corchorus olitorius HOM05D006252 ORTHO05D007909 1.0e-23 113.2 90 66.7
Cc08_g04460 Coffea canephora HOM05D006252 ORTHO05D007909 2.3e-23 112.1 95 67.4
Gohir.A05G086700 Gossypium hirsutum HOM05D006252 ORTHO05D007909 3.0e-23 111.7 91 63.7
Sabra04G0147700 Salix brachista HOM05D006252 ORTHO05D007909 5.2e-23 110.9 88 67.0
Aa31LG4G14200 Aethionema arabicum HOM05D006252 ORTHO05D007909 6.8e-23 110.5 92 63.0
PSO063G5667 Papaver somniferum HOM05D006252 ORTHO05D007909 6.8e-23 110.5 93 63.4
PSO339G3106 Papaver somniferum HOM05D006252 ORTHO05D007909 8.8e-23 110.2 93 63.4
AT3G44890 Arabidopsis thaliana HOM05D006252 ORTHO05D007909 2.6e-22 108.6 92 62.0
Potri.004G217000 Populus trichocarpa HOM05D006252 ORTHO05D007909 2.6e-22 108.6 90 64.4
Lsat_1_v5_gn_6_43381 Lactuca sativa HOM05D006252 ORTHO05D007909 3.4e-22 108.2 94 64.9
CARHR151120 Cardamine hirsuta HOM05D006252 ORTHO05D007909 4.4e-22 107.8 92 63.0
Sed0008981 Sechium edule HOM05D006252 ORTHO05D007909 4.4e-22 107.8 95 62.1
AL5G23350 Arabidopsis lyrata HOM05D006252 ORTHO05D007909 9.8e-22 106.7 92 60.9
Sp5g16320 Schrenkiella parvula HOM05D006252 ORTHO05D007909 1.3e-21 106.3 92 63.0
Sc21g0000330 Simmondsia chinensis HOM05D006252 ORTHO05D007909 1.3e-21 106.3 95 64.2
Aqoxy1G01090 Aquilegia oxysepala HOM05D006252 ORTHO05D007909 1.7e-21 105.9 92 62.0
BcaB05g23061 Brassica carinata HOM05D006252 ORTHO05D007909 2.2e-21 105.5 93 62.4
BcaC09g49661 Brassica carinata HOM05D006252 ORTHO05D007909 2.2e-21 105.5 93 62.4
A01p26720 Brassica napus HOM05D006252 ORTHO05D007909 2.2e-21 105.5 93 62.4
C01p34110 Brassica napus HOM05D006252 ORTHO05D007909 2.2e-21 105.5 93 62.4
BolC1t03381H Brassica oleracea HOM05D006252 ORTHO05D007909 2.2e-21 105.5 93 62.4
BraA01t02602Z Brassica rapa HOM05D006252 ORTHO05D007909 2.2e-21 105.5 93 62.4
HanXRQChr02g0055341 Helianthus annuus HOM05D006252 ORTHO05D007909 2.2e-21 105.5 95 65.3
vmacro14388 Vaccinium macrocarpon HOM05D006252 ORTHO05D007909 2.8e-21 105.1 96 62.5
Thhalv10002672m.g Eutrema salsugineum HOM05D006252 ORTHO05D007909 8.3e-21 103.6 92 60.9
Oeu007731.1 Olea europaea HOM05D006252 ORTHO05D007909 8.3e-21 103.6 96 66.7
TWI75G0936 Tripterygium wilfordii HOM05D006252 ORTHO05D007909 1.1e-20 103.2 91 62.6
Migut.D02295 Erythranthe guttata HOM05D006252 ORTHO05D007909 2.4e-20 102.1 96 66.7
Rhsim01G0210400 Rhododendron simsii HOM05D006252 ORTHO05D007909 2.4e-20 102.1 93 64.5
Carub.0005s1063 Capsella rubella HOM05D006252 ORTHO05D007909 3.1e-20 101.7 92 58.7
Dinv16227 Davidia involucrata HOM05D006252 ORTHO05D007909 5.4e-20 100.9 70 72.9
THA.LOC104810882 Tarenaya hassleriana HOM05D006252 ORTHO05D007909 9.1e-20 100.1 91 61.5
MSTRG.18705 Avicennia marina HOM05D006252 ORTHO05D007909 1.6e-19 99.4 94 60.6
Lj2A1006G34 Lonicera japonica HOM05D006252 ORTHO05D007909 3.5e-19 98.2 96 60.4
Nitab4.5_0005665g0020 Nicotiana tabacum HOM05D006252 ORTHO05D007909 3.5e-19 98.2 92 62.0
Phvul.011G086500 Phaseolus vulgaris HOM05D006252 ORTHO05D007909 4.5e-19 97.8 93 60.2
VMungo1127G0830 Vigna mungo HOM05D006252 ORTHO05D007909 4.5e-19 97.8 93 61.3
Actinidia07187 Actinidia chinensis HOM05D006252 ORTHO05D007909 5.9e-19 97.4 91 57.1
Glyma.12G081500 Glycine max HOM05D006252 ORTHO05D007909 5.9e-19 97.4 94 58.5
CDE08G0788 Ceratophyllum demersum HOM05D006252 ORTHO05D007909 7.7e-19 97.1 88 59.1
Glyma.11G192500 Glycine max HOM05D006252 ORTHO05D007909 1.3e-18 96.3 95 61.1
AUR62014977 Chenopodium quinoa HOM05D006252 ORTHO05D007909 1.7e-18 95.9 94 58.5
arahy.Tifrunner.gnm1.ann1.Q498P0 Arachis hypogaea HOM05D006252 ORTHO05D007909 2.2e-18 95.5 88 61.4
Peaxi162Scf00983g00015 Petunia axillaris HOM05D006252 ORTHO05D007909 2.2e-18 95.5 91 59.3
unitig_746.g26615 Utricularia gibba HOM05D006252 ORTHO05D007909 2.2e-18 95.5 91 61.5
Solyc11g066410.2 Solanum lycopersicum HOM05D006252 ORTHO05D007909 2.9e-18 95.1 87 64.4
Sopen11g026160 Solanum pennellii HOM05D006252 ORTHO05D007909 2.9e-18 95.1 87 64.4
CDE02G0854 Ceratophyllum demersum HOM05D006252 ORTHO05D007909 6.5e-18 94.0 88 56.8
arahy.Tifrunner.gnm1.ann1.4A8W5C Arachis hypogaea HOM05D006252 ORTHO05D007909 8.5e-18 93.6 88 61.4
Nitab4.5_0000173g0140 Nicotiana tabacum HOM05D006252 ORTHO05D007909 8.5e-18 93.6 91 59.3
PGSC0003DMG400000456 Solanum tuberosum HOM05D006252 ORTHO05D007909 8.5e-18 93.6 87 63.2
GSVIVG01031460001 Vitis vinifera HOM05D006252 ORTHO05D007909 8.5e-18 93.6 56 85.7
AUR62029150 Chenopodium quinoa HOM05D006252 ORTHO05D007909 1.1e-17 93.2 94 56.4
EL10Ac9g22626 Beta vulgaris HOM05D006252 ORTHO05D007909 2.5e-17 92.0 93 54.8
Ca_19323_v3 Cicer arietinum L. HOM05D006252 ORTHO05D007909 2.5e-17 92.0 93 51.6
Hund01525 Selenicereus undatus HOM05D006252 ORTHO05D007909 2.5e-17 92.0 94 57.4
Medtr4g057210 Medicago truncatula HOM05D006252 ORTHO05D007909 1.2e-16 89.7 89 53.9
Psat7g223760 Pisum sativum HOM05D006252 ORTHO05D007909 2.8e-16 88.6 90 50.0
ATR0043G002 Amborella trichopoda HOM05D006252 ORTHO05D007909 8.0e-16 87.0 57 75.4
SalBow6G6884 Salvia bowleyana HOM05D006252 ORTHO05D007909 3.0e-15 85.1 111 50.5
SGA_v2.0_scaffold277G46698 Striga asiatica HOM05D006252 ORTHO05D007909 4.0e-15 84.7 95 56.8
Lj3g0021853 Lotus japonicus HOM05D006252 ORTHO05D007909 1.2e-14 83.2 87 56.3
Lalb_Chr03g0027721 Lupinus albus HOM05D006252 ORTHO05D007909 1.2e-14 83.2 91 54.9
TPR.G36832 Trifolium pratense HOM05D006252 ORTHO05D007909 1.2e-14 83.2 90 46.7
HPP92_003365 Vanilla planifolia HOM05D006252 ORTHO05D007909 1.2e-14 83.2 89 55.1
ECA233G2302 Erigeron canadensis HOM05D006252 ORTHO05D007909 2.6e-14 82.0 98 53.1
MBI02_g05768_MAGBIO Magnolia biondii HOM05D006252 ORTHO05D007909 3.4e-14 81.6 44 88.6
MELO3C029084.2 Cucumis melo HOM05D006252 ORTHO05D007909 3.7e-13 78.2 43 86.0
Lalb_Chr19g0136901 Lupinus albus HOM05D006252 ORTHO05D007909 1.1e-12 76.6 91 51.6
Mapoly0005s0034 Marchantia polymorpha HOM05D006252 ORTHO05D007909 4.5e-11 71.2 62 53.2
SEGI_26717 Sequoiadendron giganteum HOM05D006252 ORTHO05D007909 7.8e-11 70.5 70 50.0
AagrBONN_evm.TU.Sc2ySwM_362.2261 Anthoceros agrestis HOM05D006252 ORTHO05D007909 1.7e-10 69.3 76 47.4
Zm00001eb258190 Zea mays HOM05D006252 ORTHO05D007909 1.7e-10 69.3 90 43.3
SMO118G0111 Selaginella moellendorffii HOM05D006252 ORTHO05D007909 2.3e-10 68.9 57 57.9
Pp3c2_34110 Physcomitrium patens HOM05D006252 ORTHO05D007909 8.6e-10 67.0 66 51.5
Pp3c2_34120 Physcomitrium patens HOM05D006252 ORTHO05D007909 8.6e-10 67.0 66 51.5
Pp3c1_5300 Physcomitrium patens HOM05D006252 ORTHO05D007909 1.1e-09 66.6 57 56.1
Pp3c1_5320 Physcomitrium patens HOM05D006252 ORTHO05D007909 1.1e-09 66.6 57 56.1
Zm00001eb258210 Zea mays HOM05D000274 ORTHO05D006772 1.6e-08 62.8 89 40.4
Cre12.g556050 Chlamydomonas reinhardtii HOM05D006252 ORTHO05D007909 8.0e-08 60.5 64 46.9
CBR_g36656 Chara braunii HOM05D006252 ORTHO05D007909 6.8e-07 57.4 56 48.2


User provided reference genes

Program Settings