Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_24148 Corylus avellana HOM05D007264 ORTHO05D008639 1.6e-83 312.8 168 100.0
Cfa011538 Carpinus fangiana HOM05D007264 ORTHO05D008639 2.8e-75 285.4 169 92.3
QL01p030632 Quercus lobata HOM05D007264 ORTHO05D008639 3.8e-56 221.9 170 75.9
CiPaw.14G066400 Carya illinoinensis HOM05D007264 ORTHO05D008639 3.7e-51 205.3 170 71.2
Prupe.6G071500 Prunus persica HOM05D007264 ORTHO05D008639 4.2e-39 165.2 165 60.0
RcHm_v2.0_Chr5g0066101 Rosa chinensis HOM05D007264 ORTHO05D008639 8.0e-38 161.0 172 57.0
Nn8g40679 Nelumbo nucifera HOM05D007264 ORTHO05D008639 1.5e-36 156.8 173 56.6
TAR560G0010 Trochodendron aralioides HOM05D007264 ORTHO05D008639 2.6e-36 156.0 172 54.7
FAN25G3374 Fragaria x ananassa HOM05D007264 ORTHO05D008639 4.4e-36 155.2 172 54.1
TAR623G1366 Trochodendron aralioides HOM05D007264 ORTHO05D008639 4.4e-36 155.2 172 54.7
FAN21G2492 Fragaria x ananassa HOM05D007264 ORTHO05D008639 4.8e-35 151.8 172 52.9
Dinv17036 Davidia involucrata HOM05D007264 ORTHO05D008639 1.4e-34 150.2 173 56.6
Dinv42982 Davidia involucrata HOM05D007264 ORTHO05D008639 1.4e-34 150.2 173 56.6
Dinv43117 Davidia involucrata HOM05D007264 ORTHO05D008639 1.4e-34 150.2 173 56.6
FvH4_3g36880 Fragaria vesca HOM05D007264 ORTHO05D008639 1.8e-34 149.8 173 53.2
FAN11G3606 Fragaria x ananassa HOM05D007264 ORTHO05D008639 1.8e-34 149.8 173 53.2
MD03G1086900 Malus domestica HOM05D007264 ORTHO05D008639 5.3e-34 148.3 174 52.9
MD11G1096000 Malus domestica HOM05D007264 ORTHO05D008639 9.1e-34 147.5 171 54.4
TWI79G0692 Tripterygium wilfordii HOM05D007264 ORTHO05D008639 9.1e-34 147.5 166 57.2
GSVIVG01024917001 Vitis vinifera HOM05D007264 ORTHO05D008639 1.7e-32 143.3 170 54.1
Thecc.09G317100 Theobroma cacao HOM05D007264 ORTHO05D008639 2.9e-32 142.5 167 54.5
Ciclev10029397m.g Citrus clementina HOM05D007264 ORTHO05D008639 5.5e-31 138.3 170 55.3
Potri.001G243500 Populus trichocarpa HOM05D007264 ORTHO05D008639 7.2e-31 137.9 169 49.1
MBI14_g08028_MAGBIO Magnolia biondii HOM05D007264 ORTHO05D008639 9.4e-31 137.5 138 61.6
vmacro03038 Vaccinium macrocarpon HOM05D007264 ORTHO05D008639 1.2e-30 137.1 165 58.8
Gorai.001G112100 Gossypium raimondii HOM05D007264 ORTHO05D008639 6.1e-30 134.8 174 54.0
COL.COLO4_18565 Corchorus olitorius HOM05D007264 ORTHO05D008639 8.0e-30 134.4 174 52.9
Migut.D00885 Erythranthe guttata HOM05D007264 ORTHO05D008639 8.0e-30 134.4 169 53.3
Sabra16G0147800 Salix brachista HOM05D007264 ORTHO05D008639 1.4e-29 133.7 189 48.1
Gohir.D07G104200 Gossypium hirsutum HOM05D007264 ORTHO05D008639 1.8e-29 133.3 176 51.7
Gohir.A07G099900 Gossypium hirsutum HOM05D007264 ORTHO05D008639 3.0e-29 132.5 171 51.5
Eucgr.J02035 Eucalyptus grandis HOM05D007264 ORTHO05D008639 4.0e-29 132.1 162 52.5
Manes.01G170100 Manihot esculenta HOM05D007264 ORTHO05D008639 8.8e-29 131.0 163 49.7
Cpa.g.sc81.107 Carica papaya HOM05D007264 ORTHO05D008639 2.6e-28 129.4 175 51.4
arahy.Tifrunner.gnm1.ann1.4DS88F Arachis hypogaea HOM05D007264 ORTHO05D008639 3.4e-28 129.0 164 50.6
arahy.Tifrunner.gnm1.ann1.EHGE9H Arachis hypogaea HOM05D007264 ORTHO05D008639 4.4e-28 128.6 166 51.2
PSO339G5862 Papaver somniferum HOM05D007264 ORTHO05D008639 4.4e-28 128.6 168 50.0
Peaxi162Scf00038g02028 Petunia axillaris HOM05D007264 ORTHO05D008639 4.4e-28 128.6 168 51.2
CSS0034107 Camellia sinensis var. sinensis HOM05D007264 ORTHO05D008639 9.8e-28 127.5 163 55.8
Sed0006840 Sechium edule HOM05D007264 ORTHO05D008639 1.3e-27 127.1 165 52.7
Cc01_g13240 Coffea canephora HOM05D007264 ORTHO05D008639 2.2e-27 126.3 167 49.1
ATR0559G356 Amborella trichopoda HOM05D007264 ORTHO05D008639 8.3e-27 124.4 155 51.6
PGR119G0519 Punica granatum HOM05D007264 ORTHO05D008639 1.1e-26 124.0 140 57.9
Aqoxy1G00887 Aquilegia oxysepala HOM05D007264 ORTHO05D008639 1.4e-26 123.6 165 48.5
Actinidia33776 Actinidia chinensis HOM05D007264 ORTHO05D008639 1.8e-26 123.2 162 51.9
Nn2g13417 Nelumbo nucifera HOM05D007264 ORTHO05D008639 5.4e-26 121.7 107 64.5
Nitab4.5_0006942g0010 Nicotiana tabacum HOM05D007264 ORTHO05D008639 1.2e-25 120.6 181 47.0
Nitab4.5_0014843g0020 Nicotiana tabacum HOM05D007264 ORTHO05D008639 2.0e-25 119.8 181 47.5
Oeu002437.1 Olea europaea HOM05D007264 ORTHO05D008639 2.7e-25 119.4 179 46.9
CsaV3_6G016660 Cucumis sativus L. HOM05D007264 ORTHO05D008639 3.5e-25 119.0 163 49.7
AL4G23740 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 4.5e-25 118.6 169 49.1
Oeu002436.1 Olea europaea HOM05D007264 ORTHO05D008639 4.5e-25 118.6 179 46.4
Lsat_1_v5_gn_5_169441 Lactuca sativa HOM05D007264 ORTHO05D008639 5.9e-25 118.2 150 52.7
PSO513G0105 Papaver somniferum HOM05D007264 ORTHO05D008639 7.7e-25 117.9 164 50.0
AL41U10070 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 1.0e-24 117.5 169 48.5
Duzib168G0085 Durio zibethinus HOM05D007264 ORTHO05D008639 2.9e-24 115.9 164 47.0
Atru.chr3.3962 Acer truncatum HOM05D007264 ORTHO05D008639 5.0e-24 115.2 182 46.2
AUR62020022 Chenopodium quinoa HOM05D007264 ORTHO05D008639 8.5e-24 114.4 117 60.7
AT2G29180 Arabidopsis thaliana HOM05D007264 ORTHO05D008639 1.1e-23 114.0 180 47.2
MSTRG.11098 Avicennia marina HOM05D007264 ORTHO05D008639 2.5e-23 112.8 170 49.4
Carub.0004s1020 Capsella rubella HOM05D007264 ORTHO05D008639 2.5e-23 112.8 169 47.3
ClCG02G019960 Citrullus lanatus HOM05D007264 ORTHO05D008639 2.5e-23 112.8 174 47.1
MELO3C025896.2 Cucumis melo HOM05D007264 ORTHO05D008639 2.5e-23 112.8 174 47.7
SGA_v2.0_scaffold111G31536 Striga asiatica HOM05D007264 ORTHO05D008639 3.2e-23 112.5 204 43.6
EL10Ac7g16055 Beta vulgaris HOM05D007264 ORTHO05D008639 4.2e-23 112.1 166 47.0
Solyc05g009300.1 Solanum lycopersicum HOM05D007264 ORTHO05D008639 4.2e-23 112.1 106 63.2
Sopen05g005050 Solanum pennellii HOM05D007264 ORTHO05D008639 5.5e-23 111.7 167 49.7
Hund18892 Selenicereus undatus HOM05D007264 ORTHO05D008639 1.2e-22 110.5 168 51.2
CARHR122460 Cardamine hirsuta HOM05D007264 ORTHO05D008639 2.1e-22 109.8 176 44.9
DCAR_005951 Daucus carota HOM05D007264 ORTHO05D008639 2.1e-22 109.8 182 46.2
BcaC03g18293 Brassica carinata HOM05D007264 ORTHO05D008639 2.7e-22 109.4 166 49.4
C02p63690 Brassica napus HOM05D007264 ORTHO05D008639 2.7e-22 109.4 166 49.4
BolC2t12437H Brassica oleracea HOM05D007264 ORTHO05D008639 4.7e-22 108.6 142 54.2
Medtr2g097680 Medicago truncatula HOM05D007264 ORTHO05D008639 8.0e-22 107.8 165 48.5
Lalb_Chr24g0394031 Lupinus albus HOM05D007264 ORTHO05D008639 1.4e-21 107.1 167 41.3
PGSC0003DMG400014567 Solanum tuberosum HOM05D007264 ORTHO05D008639 1.4e-21 107.1 168 50.6
HanXRQChr01g0010441 Helianthus annuus HOM05D007264 ORTHO05D008639 6.8e-21 104.8 164 44.5
CDE04G3075 Ceratophyllum demersum HOM05D007264 ORTHO05D008639 8.8e-21 104.4 115 52.2
Lj3g0004900 Lotus japonicus HOM05D007264 ORTHO05D008639 8.8e-21 104.4 140 47.9
Medtr1g071380 Medicago truncatula HOM05D007264 ORTHO05D008639 1.2e-20 104.0 165 49.7
BcaB01g03133 Brassica carinata HOM05D007264 ORTHO05D008639 2.0e-20 103.2 134 52.2
ECA248G2900 Erigeron canadensis HOM05D007264 ORTHO05D008639 2.0e-20 103.2 94 63.8
CANSAT54G1805 Cannabis sativa HOM05D007264 ORTHO05D008639 4.4e-20 102.1 169 45.6
A02p43580 Brassica napus HOM05D007264 ORTHO05D008639 7.5e-20 101.3 166 47.6
Aa31LG5G7130 Aethionema arabicum HOM05D007264 ORTHO05D008639 4.9e-19 98.6 187 43.3
BraA02t09285Z Brassica rapa HOM05D007264 ORTHO05D008639 4.9e-19 98.6 166 46.4
AUR62001749 Chenopodium quinoa HOM05D007264 ORTHO05D008639 3.1e-18 95.9 144 51.4
TAR369G0859 Trochodendron aralioides HOM05D007264 ORTHO05D008639 3.1e-18 95.9 111 51.4
THA.LOC104800684 Tarenaya hassleriana HOM05D007264 ORTHO05D008639 4.1e-18 95.5 73 75.3
Sp4g11990 Schrenkiella parvula HOM05D007264 ORTHO05D008639 5.4e-18 95.1 180 42.8
Glyma.15G035800 Glycine max HOM05D007264 ORTHO05D008639 3.5e-17 92.4 92 53.3
Sc25g0001650 Simmondsia chinensis HOM05D007264 ORTHO05D008639 1.7e-16 90.1 129 46.5
Glyma.13G338500 Glycine max HOM05D007264 ORTHO05D008639 8.6e-16 87.8 168 40.5
VMungo1080G0594 Vigna mungo HOM05D007264 ORTHO05D008639 1.2e-14 84.0 104 46.2
Phvul.L007743 Phaseolus vulgaris HOM05D007264 ORTHO05D008639 4.7e-14 82.0 170 37.6
Ah.15g098550 Amaranthus hybridus HOM05D007264 ORTHO05D008639 1.4e-13 80.5 168 39.3
Psat5g287960 Pisum sativum HOM05D007264 ORTHO05D008639 1.4e-13 80.5 164 37.8
TPR.G6833 Trifolium pratense HOM05D007264 ORTHO05D008639 2.3e-13 79.7 181 39.2
Rhsim13G0078000 Rhododendron simsii HOM05D007264 ORTHO05D008639 1.2e-12 77.4 117 47.9
unitig_899.g15261 Utricularia gibba HOM05D007264 ORTHO05D008639 4.4e-12 75.5 68 70.6
BcaB01g03134 Brassica carinata HOM05D007264 ORTHO05D008639 2.7e-09 66.2 176 37.5
Os03g0271500 Oryza sativa ssp. japonica HOM05D016300 ORTHO05D008639 3.5e-09 65.9 74 51.4
TWI31G0635 Tripterygium wilfordii HOM05D007264 ORTHO05D008639 1.0e-08 64.3 135 40.0
Thhalv10017315m.g Eutrema salsugineum HOM05D007264 ORTHO05D008639 7.3e-07 58.2 174 35.1
Potri.009G034951 Populus trichocarpa HOM05D007264 ORTHO05D008639 3.6e-06 55.8 62 54.8


User provided reference genes

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