Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_24130 Corylus avellana HOM05D006754 ORTHO05D008403 2.0e-217 758.8 396 100.0
QL01p030969 Quercus lobata HOM05D006754 ORTHO05D008403 5.6e-183 644.4 395 82.3
CiPaw.14G067200 Carya illinoinensis HOM05D006754 ORTHO05D008403 5.4e-178 627.9 396 81.1
Thecc.09G318400 Theobroma cacao HOM05D006754 ORTHO05D008403 1.1e-165 587.0 397 76.6
Gorai.009G097800 Gossypium raimondii HOM05D006754 ORTHO05D008403 2.7e-161 572.4 397 75.3
RcHm_v2.0_Chr5g0065861 Rosa chinensis HOM05D006754 ORTHO05D008403 2.3e-160 569.3 399 72.7
Gohir.A05G094100 Gossypium hirsutum HOM05D006754 ORTHO05D008403 5.1e-160 568.2 397 75.1
FAN11G1342 Fragaria x ananassa HOM05D006754 ORTHO05D008403 6.2e-158 561.2 388 71.9
COL.COLO4_18549 Corchorus olitorius HOM05D006754 ORTHO05D008403 1.8e-157 559.7 397 73.0
FvH4_3g36800 Fragaria vesca HOM05D006754 ORTHO05D008403 3.1e-157 558.9 387 71.8
Atru.chr3.3972 Acer truncatum HOM05D006754 ORTHO05D008403 1.2e-156 557.0 397 73.0
FAN16G0425 Fragaria x ananassa HOM05D006754 ORTHO05D008403 2.2e-155 552.7 392 71.4
FAN25G2379 Fragaria x ananassa HOM05D006754 ORTHO05D008403 4.9e-155 551.6 386 71.8
CSS0026926 Camellia sinensis var. sinensis HOM05D006754 ORTHO05D008403 3.5e-153 545.4 399 68.7
MD03G1088200 Malus domestica HOM05D006754 ORTHO05D008403 3.9e-152 542.0 406 70.4
CSS0030688 Camellia sinensis var. sinensis HOM05D006754 ORTHO05D008403 5.1e-152 541.6 399 68.2
Potri.001G242400 Populus trichocarpa HOM05D006754 ORTHO05D008403 8.7e-152 540.8 405 69.9
TWI79G1092 Tripterygium wilfordii HOM05D006754 ORTHO05D008403 1.9e-151 539.7 403 68.5
Potri.009G033700 Populus trichocarpa HOM05D006754 ORTHO05D008403 2.5e-151 539.3 406 68.0
Sabra16G0147200 Salix brachista HOM05D006754 ORTHO05D008403 1.3e-150 537.0 405 69.6
Ciclev10030407m.g Citrus clementina HOM05D006754 ORTHO05D008403 1.6e-150 536.6 396 69.9
Eucgr.B02322 Eucalyptus grandis HOM05D006754 ORTHO05D008403 6.2e-150 534.6 401 70.1
Glyma.15G221700 Glycine max HOM05D006754 ORTHO05D008403 5.3e-149 531.6 398 69.1
Cpa.g.sc81.116 Carica papaya HOM05D006754 ORTHO05D008403 6.9e-149 531.2 399 67.4
Prupe.6G072500 Prunus persica HOM05D006754 ORTHO05D008403 7.6e-148 527.7 384 70.8
Manes.01G171100 Manihot esculenta HOM05D006754 ORTHO05D008403 2.2e-147 526.2 413 69.2
Lj3g0006516 Lotus japonicus HOM05D006754 ORTHO05D008403 1.4e-146 523.5 402 69.7
VMungo1127G1194 Vigna mungo HOM05D006754 ORTHO05D008403 3.2e-146 522.3 398 68.3
Glyma.08G227600 Glycine max HOM05D006754 ORTHO05D008403 5.5e-146 521.5 397 68.5
Phvul.011G187300 Phaseolus vulgaris HOM05D006754 ORTHO05D008403 3.0e-144 515.8 398 68.6
CANSAT56G3630 Cannabis sativa HOM05D006754 ORTHO05D008403 4.3e-143 511.9 399 69.4
THA.LOC104799439 Tarenaya hassleriana HOM05D006754 ORTHO05D008403 7.4e-143 511.1 398 67.6
Ca_24122_v3 Cicer arietinum L. HOM05D006754 ORTHO05D008403 2.8e-142 509.2 401 65.6
Hma1.2p1_0615F.1_g189790 Hydrangea macrophylla HOM05D006754 ORTHO05D008403 2.8e-142 509.2 413 65.1
Psat4g178480 Pisum sativum HOM05D006754 ORTHO05D008403 6.9e-141 504.6 403 65.8
PGR102G0280 Punica granatum HOM05D006754 ORTHO05D008403 3.4e-140 502.3 404 65.8
arahy.Tifrunner.gnm1.ann1.826T7K Arachis hypogaea HOM05D006754 ORTHO05D008403 1.3e-139 500.4 400 66.5
Nn8g38772 Nelumbo nucifera HOM05D006754 ORTHO05D008403 3.8e-139 498.8 408 65.4
CsaV3_1G034490 Cucumis sativus L. HOM05D006754 ORTHO05D008403 6.5e-139 498.0 408 67.2
Medtr8g044030 Medicago truncatula HOM05D006754 ORTHO05D008403 1.4e-138 496.9 423 62.4
THA.LOC104814881 Tarenaya hassleriana HOM05D006754 ORTHO05D008403 3.9e-136 488.8 402 62.4
Sc12g0001320 Simmondsia chinensis HOM05D006754 ORTHO05D008403 1.1e-135 487.3 399 63.4
Lj2P1066T40 Lonicera japonica HOM05D006754 ORTHO05D008403 2.0e-135 486.5 407 61.9
PSO063G1099 Papaver somniferum HOM05D006754 ORTHO05D008403 9.7e-135 484.2 402 66.2
PSO339G3555 Papaver somniferum HOM05D006754 ORTHO05D008403 2.2e-134 483.0 404 66.1
ClCG03G001330 Citrullus lanatus HOM05D006754 ORTHO05D008403 2.8e-134 482.6 390 67.2
Aqoxy2G02260 Aquilegia oxysepala HOM05D006754 ORTHO05D008403 3.7e-134 482.3 405 65.7
Aa31LG1G11840 Aethionema arabicum HOM05D006754 ORTHO05D008403 8.2e-134 481.1 400 65.2
FAN21G1313 Fragaria x ananassa HOM05D006754 ORTHO05D008403 8.2e-134 481.1 407 65.4
Sed0002230 Sechium edule HOM05D006754 ORTHO05D008403 4.1e-133 478.8 362 69.6
Thhalv10015639m.g Eutrema salsugineum HOM05D006754 ORTHO05D008403 6.5e-131 471.5 402 62.7
Cc01_g13150 Coffea canephora HOM05D006754 ORTHO05D008403 8.5e-131 471.1 406 62.8
Sp6g21200 Schrenkiella parvula HOM05D006754 ORTHO05D008403 3.6e-129 465.7 402 62.4
DCAR_005953 Daucus carota HOM05D006754 ORTHO05D008403 6.1e-129 464.9 413 61.5
Oeu026710.1 Olea europaea HOM05D006754 ORTHO05D008403 2.3e-128 463.0 430 59.5
Solyc07g007700.3 Solanum lycopersicum HOM05D006754 ORTHO05D008403 5.1e-128 461.8 404 59.9
Sopen07g003690 Solanum pennellii HOM05D006754 ORTHO05D008403 5.1e-128 461.8 404 60.1
AL8G35980 Arabidopsis lyrata HOM05D006754 ORTHO05D008403 1.1e-127 460.7 402 60.9
CARHR285870 Cardamine hirsuta HOM05D006754 ORTHO05D008403 4.4e-127 458.8 402 61.2
BraA10t43752Z Brassica rapa HOM05D006754 ORTHO05D008403 7.4e-127 458.0 400 62.5
PGSC0003DMG400030707 Solanum tuberosum HOM05D006754 ORTHO05D008403 7.4e-127 458.0 406 58.9
AT5G59500 Arabidopsis thaliana HOM05D006754 ORTHO05D008403 9.7e-127 457.6 402 60.0
Ah.15g097770 Amaranthus hybridus HOM05D006754 ORTHO05D008403 4.8e-126 455.3 397 61.0
BcaC04g19764 Brassica carinata HOM05D006754 ORTHO05D008403 1.1e-125 454.1 400 62.2
C09p51900 Brassica napus HOM05D006754 ORTHO05D008403 1.1e-125 454.1 400 62.2
BolC9t58053H Brassica oleracea HOM05D006754 ORTHO05D008403 1.1e-125 454.1 400 62.2
A10p16710 Brassica napus HOM05D006754 ORTHO05D008403 1.5e-124 450.3 400 61.5
Gohir.D05G094600 Gossypium hirsutum HOM05D006754 ORTHO05D008403 7.7e-124 448.0 324 73.1
BcaB08g36252 Brassica carinata HOM05D006754 ORTHO05D008403 1.0e-123 447.6 399 61.9
Carub.0008s2018 Capsella rubella HOM05D006754 ORTHO05D008403 1.3e-123 447.2 400 61.5
MSTRG.21206 Avicennia marina HOM05D006754 ORTHO05D008403 1.7e-123 446.8 319 69.9
CAN.G969.5 Capsicum annuum HOM05D006754 ORTHO05D008403 3.8e-123 445.7 404 56.9
Nitab4.5_0007132g0020 Nicotiana tabacum HOM05D006754 ORTHO05D008403 7.2e-122 441.4 289 72.7
Migut.F00608 Erythranthe guttata HOM05D006754 ORTHO05D008403 9.4e-122 441.0 373 62.7
Lsat_1_v5_gn_8_73421 Lactuca sativa HOM05D006754 ORTHO05D008403 6.1e-121 438.3 375 59.5
EL10Ac7g16047 Beta vulgaris HOM05D006754 ORTHO05D008403 2.3e-120 436.4 398 58.5
AUR62001757 Chenopodium quinoa HOM05D006754 ORTHO05D008403 5.2e-120 435.3 398 58.8
SalBow7G4834 Salvia bowleyana HOM05D006754 ORTHO05D008403 8.8e-120 434.5 412 60.0
SalBow7G2225 Salvia bowleyana HOM05D006754 ORTHO05D008403 1.5e-119 433.7 412 60.2
HanXRQChr05g0135011 Helianthus annuus HOM05D006754 ORTHO05D008403 7.4e-119 431.4 375 58.7
Nitab4.5_0000272g0070 Nicotiana tabacum HOM05D006754 ORTHO05D008403 2.2e-118 429.9 271 74.9
AUR62009543 Chenopodium quinoa HOM05D006754 ORTHO05D008403 3.7e-118 429.1 398 59.0
unitig_37.g12673 Utricularia gibba HOM05D006754 ORTHO05D008403 1.6e-113 413.7 340 61.5
MBI14_g12133_MAGBIO Magnolia biondii HOM05D006754 ORTHO05D008403 6.1e-113 411.8 404 58.7
Sed0016816 Sechium edule HOM05D006754 ORTHO05D008403 1.5e-111 407.1 397 56.4
Dinv22095 Davidia involucrata HOM05D006754 ORTHO05D008403 3.3e-111 406.0 242 80.6
Duzib168G0850 Durio zibethinus HOM05D006754 ORTHO05D008403 8.3e-110 401.4 247 76.5
Peaxi162Scf00122g00144 Petunia axillaris HOM05D006754 ORTHO05D008403 2.4e-109 399.8 392 54.8
Lalb_Chr01g0007611 Lupinus albus HOM05D006754 ORTHO05D008403 2.9e-107 392.9 400 54.8
CDE04G0725 Ceratophyllum demersum HOM05D006754 ORTHO05D008403 4.0e-104 382.5 325 58.2
CDE07G0060 Ceratophyllum demersum HOM05D006754 ORTHO05D008403 1.4e-101 374.0 316 57.6
Oeu004165.1 Olea europaea HOM05D006754 ORTHO05D008403 5.4e-101 372.1 356 57.0
Dinv09390 Davidia involucrata HOM05D006754 ORTHO05D008403 4.5e-100 369.0 231 77.9
ATR0752G045 Amborella trichopoda HOM05D006754 ORTHO05D008403 1.1e-98 364.4 376 55.1
SGA_v2.0_scaffold51G18718 Striga asiatica HOM05D006754 ORTHO05D008403 3.0e-96 356.3 381 50.9
GSVIVG01024926001 Vitis vinifera HOM05D006754 ORTHO05D008403 4.3e-90 335.9 397 50.4
TPR.G35751 Trifolium pratense HOM05D006754 ORTHO05D008403 1.7e-83 313.9 400 47.5
ECA236G3563 Erigeron canadensis HOM05D006754 ORTHO05D008403 3.6e-65 253.1 149 75.2
Pp3c1_41830 Physcomitrium patens HOM05D006754 ORTHO05D008403 1.1e-53 214.9 309 37.2
C03p13670 Brassica napus HOM05D006754 ORTHO05D008403 4.8e-49 199.5 141 68.1
BolC3t13816H Brassica oleracea HOM05D006754 ORTHO05D008403 4.8e-49 199.5 141 68.1
Mapoly0044s0017 Marchantia polymorpha HOM05D006754 ORTHO05D008403 4.8e-49 199.5 295 37.3
Aqoxy2G02265 Aquilegia oxysepala HOM05D006754 ORTHO05D008403 4.5e-47 193.0 218 55.5
HPP92_027965 Vanilla planifolia HOM05D006754 ORTHO05D008403 7.6e-47 192.2 224 52.7
AagrBONN_evm.TU.Sc2ySwM_368.2585 Anthoceros agrestis HOM05D006754 ORTHO05D008403 7.1e-45 185.7 300 37.7
SMO356G0015 Selaginella moellendorffii HOM05D006754 ORTHO05D008403 6.7e-43 179.1 270 36.3
Nn4g26458 Nelumbo nucifera HOM05D006754 ORTHO05D008403 2.8e-41 173.7 119 74.8
BcaB05g22514 Brassica carinata HOM05D006754 ORTHO05D008403 1.9e-37 161.0 157 53.5
MD11G1097300 Malus domestica HOM05D006754 ORTHO05D008403 2.5e-37 160.6 200 49.5
Dinv06263 Davidia involucrata HOM05D006754 ORTHO05D008403 1.8e-32 144.4 97 78.4
CBR_g46210 Chara braunii HOM05D006754 ORTHO05D008403 3.7e-25 120.2 277 29.6
HPP92_001678 Vanilla planifolia HOM05D006754 ORTHO05D008403 4.8e-25 119.8 164 44.5
SEGI_33641 Sequoiadendron giganteum HOM05D006754 ORTHO05D008403 7.4e-18 95.9 276 27.9
Cre01.g049750 Chlamydomonas reinhardtii HOM05D006754 ORTHO05D008403 2.7e-12 77.4 219 29.2
BcaC03g14007 Brassica carinata HOM05D006754 ORTHO05D008403 2.0e-10 71.2 94 48.9
C02p12450 Brassica napus HOM05D006754 ORTHO05D008403 7.4e-10 69.3 92 48.9


User provided reference genes

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