Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_24096 Corylus avellana HOM05D003862 ORTHO05D004398 9.7e-76 287.0 169 100.0
Cfa011504 Carpinus fangiana HOM05D003862 ORTHO05D004398 2.3e-29 132.9 78 83.3
Glyma.12G063000 Glycine max HOM05D003862 ORTHO05D004398 3.1e-29 132.5 76 84.2
MD11G1108200 Malus domestica HOM05D003862 ORTHO05D004398 4.0e-29 132.1 78 82.1
RcHm_v2.0_Chr5g0064531 Rosa chinensis HOM05D003862 ORTHO05D004398 4.0e-29 132.1 78 82.1
Glyma.11G139400 Glycine max HOM05D003862 ORTHO05D004398 1.2e-28 130.6 76 82.9
FvH4_3g36110 Fragaria vesca HOM05D003862 ORTHO05D004398 2.0e-28 129.8 70 90.0
FAN11G3597 Fragaria x ananassa HOM05D003862 ORTHO05D004398 2.0e-28 129.8 70 90.0
FAN16G1598 Fragaria x ananassa HOM05D003862 ORTHO05D004398 2.0e-28 129.8 70 90.0
FAN21G0907 Fragaria x ananassa HOM05D003862 ORTHO05D004398 2.0e-28 129.8 70 90.0
FAN25G1864 Fragaria x ananassa HOM05D003862 ORTHO05D004398 2.0e-28 129.8 70 90.0
Phvul.011G064100 Phaseolus vulgaris HOM05D003862 ORTHO05D004398 2.0e-28 129.8 78 82.1
Prupe.6G077400 Prunus persica HOM05D003862 ORTHO05D004398 2.0e-28 129.8 78 80.8
TPR.G17728 Trifolium pratense HOM05D003862 ORTHO05D004398 2.0e-28 129.8 76 81.6
CiPaw.14G068400 Carya illinoinensis HOM05D003862 ORTHO05D004398 2.6e-28 129.4 78 80.8
Ca_19161_v3 Cicer arietinum L. HOM05D003862 ORTHO05D004398 2.6e-28 129.4 62 98.4
QL01p031927 Quercus lobata HOM05D003862 ORTHO05D004398 2.6e-28 129.4 62 98.4
CANSAT54G2947 Cannabis sativa HOM05D003862 ORTHO05D004398 3.4e-28 129.0 76 82.9
Lj3g0018643 Lotus japonicus HOM05D003862 ORTHO05D004398 3.4e-28 129.0 76 82.9
PGR102G0842 Punica granatum HOM05D003862 ORTHO05D004398 3.4e-28 129.0 78 79.5
Lalb_Chr03g0026631 Lupinus albus HOM05D003862 ORTHO05D004398 7.5e-28 127.9 76 81.6
Medtr4g063925 Medicago truncatula HOM05D003862 ORTHO05D004398 7.5e-28 127.9 70 88.6
Cfa016018 Carpinus fangiana HOM05D000273 ORTHO05D004398 9.8e-28 127.5 78 79.5
TPR.G14480 Trifolium pratense HOM05D003862 ORTHO05D004398 9.8e-28 127.5 62 96.8
Lalb_Chr19g0137831 Lupinus albus HOM05D003862 ORTHO05D004398 2.9e-27 125.9 70 87.1
PGR119G1270 Punica granatum HOM05D003862 ORTHO05D004398 3.7e-27 125.6 78 78.2
HPP92_018126 Vanilla planifolia HOM05D003862 ORTHO05D004398 8.3e-27 124.4 78 76.9
HPP92_018144 Vanilla planifolia HOM05D003862 ORTHO05D004398 8.3e-27 124.4 78 76.9
CDE07G2069 Ceratophyllum demersum HOM05D003862 ORTHO05D004398 1.1e-26 124.0 76 78.9
Dinv17003 Davidia involucrata HOM05D003862 ORTHO05D004398 1.4e-26 123.6 78 76.9
Dinv42952 Davidia involucrata HOM05D003862 ORTHO05D004398 1.4e-26 123.6 78 76.9
Dinv43148 Davidia involucrata HOM05D003862 ORTHO05D004398 1.4e-26 123.6 78 76.9
arahy.Tifrunner.gnm1.ann1.PAA8CG Arachis hypogaea HOM05D003862 ORTHO05D004398 2.4e-26 122.9 62 91.9
arahy.Tifrunner.gnm1.ann1.Q4VW5J Arachis hypogaea HOM05D003862 ORTHO05D004398 2.4e-26 122.9 62 91.9
Oeu032100.1 Olea europaea HOM05D003862 ORTHO05D004398 2.4e-26 122.9 80 76.2
CSS0028919 Camellia sinensis var. sinensis HOM05D003862 ORTHO05D004398 4.1e-26 122.1 78 76.9
CSS0038231 Camellia sinensis var. sinensis HOM05D003862 ORTHO05D004398 4.1e-26 122.1 78 76.9
DCAR_030095 Daucus carota HOM05D003862 ORTHO05D004398 4.1e-26 122.1 76 78.9
Oeu014415.1 Olea europaea HOM05D003862 ORTHO05D004398 4.1e-26 122.1 78 76.9
vmacro20157 Vaccinium macrocarpon HOM05D003862 ORTHO05D004398 4.1e-26 122.1 76 78.9
TAR369G0814 Trochodendron aralioides HOM05D003862 ORTHO05D004398 5.4e-26 121.7 78 75.6
Cfa017379 Carpinus fangiana HOM05D003862 ORTHO05D004398 7.0e-26 121.3 76 78.9
Haze_20791 Corylus avellana HOM05D003862 ORTHO05D004398 7.0e-26 121.3 76 78.9
TWI36G0288 Tripterygium wilfordii HOM05D003862 ORTHO05D004398 7.0e-26 121.3 78 75.6
Cc10_g12100 Coffea canephora HOM05D003862 ORTHO05D004398 9.2e-26 120.9 78 75.6
HanXRQChr05g0136091 Helianthus annuus HOM05D003862 ORTHO05D004398 9.2e-26 120.9 76 76.3
Actinidia11257 Actinidia chinensis HOM05D003862 ORTHO05D004398 1.2e-25 120.6 81 74.1
Migut.D00467 Erythranthe guttata HOM05D003862 ORTHO05D004398 1.2e-25 120.6 78 75.6
Nitab4.5_0000349g0310 Nicotiana tabacum HOM05D003862 ORTHO05D004398 1.2e-25 120.6 78 75.6
Nitab4.5_0001911g0090 Nicotiana tabacum HOM05D003862 ORTHO05D004398 1.2e-25 120.6 78 75.6
TAR636G2804 Trochodendron aralioides HOM05D003862 ORTHO05D004398 1.2e-25 120.6 78 75.6
GSVIVG01034172001 Vitis vinifera HOM05D003862 ORTHO05D004398 1.2e-25 120.6 78 75.6
Hund10643 Selenicereus undatus HOM05D003862 ORTHO05D004398 1.6e-25 120.2 78 74.4
TWI75G0870 Tripterygium wilfordii HOM05D003862 ORTHO05D004398 1.6e-25 120.2 78 74.4
CiPaw.09G192600 Carya illinoinensis HOM05D003862 ORTHO05D004398 2.0e-25 119.8 78 75.6
ClCG10G021140 Citrullus lanatus HOM05D003862 ORTHO05D004398 2.0e-25 119.8 78 74.4
MELO3C009258.2 Cucumis melo HOM05D003862 ORTHO05D004398 2.0e-25 119.8 78 74.4
CsaV3_3G034900 Cucumis sativus L. HOM05D003862 ORTHO05D004398 2.0e-25 119.8 78 74.4
MBI05_g22042_MAGBIO Magnolia biondii HOM05D003862 ORTHO05D004398 2.0e-25 119.8 78 74.4
Nitab4.5_0006455g0030 Nicotiana tabacum HOM05D003862 ORTHO05D004398 2.0e-25 119.8 78 75.6
SalBow5G2575 Salvia bowleyana HOM05D003862 ORTHO05D004398 2.0e-25 119.8 78 74.4
Sed0018689 Sechium edule HOM05D003862 ORTHO05D004398 2.0e-25 119.8 78 75.6
Thecc.09G321500 Theobroma cacao HOM05D003862 ORTHO05D004398 2.0e-25 119.8 78 74.4
Sed0022625 Sechium edule HOM05D003862 ORTHO05D004398 2.7e-25 119.4 78 75.6
AUR62038108 Chenopodium quinoa HOM05D003862 ORTHO05D004398 3.5e-25 119.0 78 73.1
MD04G1129100 Malus domestica HOM05D003862 ORTHO05D004398 3.5e-25 119.0 70 82.9
Nn2g14532 Nelumbo nucifera HOM05D003862 ORTHO05D004398 3.5e-25 119.0 64 89.1
Nitab4.5_0002018g0010 Nicotiana tabacum HOM05D003862 ORTHO05D004398 3.5e-25 119.0 78 74.4
TWI31G1113 Tripterygium wilfordii HOM05D003862 ORTHO05D004398 3.5e-25 119.0 78 74.4
GSVIVG01024961001 Vitis vinifera HOM05D003862 ORTHO05D004398 3.5e-25 119.0 78 73.1
Ah.02g115390 Amaranthus hybridus HOM05D003862 ORTHO05D004398 4.6e-25 118.6 78 71.8
Hma1.2p1_0936F.1_g238710 Hydrangea macrophylla HOM05D003862 ORTHO05D004398 4.6e-25 118.6 78 73.1
Hma1.2p1_1513F.1_g287975 Hydrangea macrophylla HOM05D003862 ORTHO05D004398 4.6e-25 118.6 78 73.1
MD12G1141800 Malus domestica HOM05D003862 ORTHO05D004398 6.0e-25 118.2 70 82.9
Rhsim05G0192800 Rhododendron simsii HOM05D003862 ORTHO05D004398 6.0e-25 118.2 61 91.8
Prupe.6G255300 Prunus persica HOM05D003862 ORTHO05D004398 7.8e-25 117.9 70 81.4
unitig_744.g24379 Utricularia gibba HOM05D003862 ORTHO05D004398 7.8e-25 117.9 78 70.5
vmacro08654 Vaccinium macrocarpon HOM05D003862 ORTHO05D004398 7.8e-25 117.9 62 88.7
Duzib168G1372 Durio zibethinus HOM05D003862 ORTHO05D004398 1.0e-24 117.5 78 73.1
Duzib170G0179 Durio zibethinus HOM05D003862 ORTHO05D004398 1.0e-24 117.5 78 73.1
PSO063G5647 Papaver somniferum HOM05D003862 ORTHO05D004398 1.0e-24 117.5 78 73.1
PSO339G2698 Papaver somniferum HOM05D003862 ORTHO05D004398 1.0e-24 117.5 78 73.1
PSO384G2795 Papaver somniferum HOM05D003862 ORTHO05D004398 1.0e-24 117.5 78 73.1
AUR62025808 Chenopodium quinoa HOM05D003862 ORTHO05D004398 1.3e-24 117.1 78 71.8
Os12g0571200 Oryza sativa ssp. japonica HOM05D003862 ORTHO05D004398 1.3e-24 117.1 78 71.8
Potri.012G039100 Populus trichocarpa HOM05D003862 ORTHO05D004398 1.3e-24 117.1 62 88.7
Sabra12G0027600 Salix brachista HOM05D003862 ORTHO05D004398 1.3e-24 117.1 62 88.7
Sc20g0004910 Simmondsia chinensis HOM05D003862 ORTHO05D004398 1.3e-24 117.1 62 88.7
unitig_21.g20465 Utricularia gibba HOM05D003164 ORTHO05D003575 1.3e-24 117.1 70 80.0
FAN02G2377 Fragaria x ananassa HOM05D003862 ORTHO05D004398 1.7e-24 116.7 70 81.4
FAN09G4075 Fragaria x ananassa HOM05D003862 ORTHO05D004398 1.7e-24 116.7 70 81.4
Gohir.D03G125700 Gossypium hirsutum HOM05D003862 ORTHO05D004398 1.7e-24 116.7 76 75.0
Gorai.003G131900 Gossypium raimondii HOM05D003862 ORTHO05D004398 1.7e-24 116.7 76 75.0
Lsat_1_v5_gn_4_177081 Lactuca sativa HOM05D003862 ORTHO05D004398 1.7e-24 116.7 70 80.0
Lsat_1_v5_gn_5_170681 Lactuca sativa HOM05D003862 ORTHO05D004398 1.7e-24 116.7 70 80.0
Peaxi162Scf00330g00415 Petunia axillaris HOM05D003862 ORTHO05D004398 1.7e-24 116.7 78 71.8
Cpa.g.sc81.150 Carica papaya HOM05D003862 ORTHO05D004398 3.0e-24 115.9 76 75.0
Dinv37171 Davidia involucrata HOM05D003862 ORTHO05D004398 3.0e-24 115.9 61 90.2
Migut.D01636 Erythranthe guttata HOM05D003862 ORTHO05D004398 3.0e-24 115.9 78 71.8
Gohir.A03G042066 Gossypium hirsutum HOM05D003862 ORTHO05D004398 3.0e-24 115.9 76 73.7
EL10Ac5g11591 Beta vulgaris HOM05D003862 ORTHO05D004398 3.9e-24 115.5 78 70.5
ECA248G1530 Erigeron canadensis HOM05D003862 ORTHO05D004398 3.9e-24 115.5 62 85.5
Gohir.D13G233100 Gossypium hirsutum HOM05D003862 ORTHO05D004398 3.9e-24 115.5 76 73.7
Gorai.013G263900 Gossypium raimondii HOM05D003862 ORTHO05D004398 3.9e-24 115.5 76 73.7
QL07p048307 Quercus lobata HOM05D003862 ORTHO05D004398 3.9e-24 115.5 61 90.2
CAN.G1195.10 Capsicum annuum HOM05D003862 ORTHO05D004398 5.0e-24 115.2 62 87.1
Duzib150G0578 Durio zibethinus HOM05D003862 ORTHO05D004398 5.0e-24 115.2 78 71.8
Solyc10g086510.2 Solanum lycopersicum HOM05D003862 ORTHO05D004398 5.0e-24 115.2 62 87.1
Sopen10g035890 Solanum pennellii HOM05D003862 ORTHO05D004398 5.0e-24 115.2 62 87.1
PGSC0003DMG400019201 Solanum tuberosum HOM05D003862 ORTHO05D004398 5.0e-24 115.2 62 87.1
CAN.G326.7 Capsicum annuum HOM05D003862 ORTHO05D004398 6.6e-24 114.8 62 85.5
Ciclev10029679m.g Citrus clementina HOM05D003862 ORTHO05D004398 6.6e-24 114.8 70 80.0
Thhalv10002743m.g Eutrema salsugineum HOM05D003862 ORTHO05D004398 6.6e-24 114.8 76 75.0
Sp2g01740 Schrenkiella parvula HOM05D003862 ORTHO05D004398 6.6e-24 114.8 76 75.0
THA.LOC104799442 Tarenaya hassleriana HOM05D003862 ORTHO05D004398 6.6e-24 114.8 70 80.0
AT3G46560 Arabidopsis thaliana HOM05D003862 ORTHO05D004398 8.6e-24 114.4 76 75.0
Carub.0005s1283 Capsella rubella HOM05D003862 ORTHO05D004398 8.6e-24 114.4 76 75.0
FvH4_6g13690 Fragaria vesca HOM05D003862 ORTHO05D004398 8.6e-24 114.4 70 80.0
COL.COLO4_18508 Corchorus olitorius HOM05D003862 ORTHO05D004398 1.5e-23 113.6 76 72.4
Thhalv10023780m.g Eutrema salsugineum HOM05D003862 ORTHO05D004398 1.5e-23 113.6 76 73.7
Gohir.A13G227500 Gossypium hirsutum HOM05D003862 ORTHO05D004398 1.5e-23 113.6 76 72.4
RcHm_v2.0_Chr3g0466561 Rosa chinensis HOM05D003862 ORTHO05D004398 1.5e-23 113.6 70 78.6
Carub.0003s2691 Capsella rubella HOM05D003862 ORTHO05D004398 1.9e-23 113.2 62 87.1
Peaxi162Scf01517g00013 Petunia axillaris HOM05D003862 ORTHO05D004398 1.9e-23 113.2 78 69.2
THA.LOC104810779 Tarenaya hassleriana HOM05D003862 ORTHO05D004398 2.5e-23 112.8 70 78.6
Sc05g0009640 Simmondsia chinensis HOM05D003862 ORTHO05D004398 4.3e-23 112.1 62 82.3
CARHR155240 Cardamine hirsuta HOM05D003862 ORTHO05D004398 5.6e-23 111.7 76 73.7
AL5G25420 Arabidopsis lyrata HOM05D003862 ORTHO05D004398 7.3e-23 111.3 91 65.9
BcaC02g10413 Brassica carinata HOM05D003862 ORTHO05D004398 9.5e-23 110.9 76 72.4
C04p29160 Brassica napus HOM05D003862 ORTHO05D004398 9.5e-23 110.9 76 72.4
BolC4t24450H Brassica oleracea HOM05D003862 ORTHO05D004398 9.5e-23 110.9 76 72.4
Aa31LG4G15560 Aethionema arabicum HOM05D003862 ORTHO05D004398 1.6e-22 110.2 62 85.5
BcaC04g22454 Brassica carinata HOM05D003862 ORTHO05D004398 1.6e-22 110.2 76 71.1
A09p15900 Brassica napus HOM05D003862 ORTHO05D004398 1.6e-22 110.2 76 71.1
C09p19140 Brassica napus HOM05D003862 ORTHO05D004398 1.6e-22 110.2 76 71.1
BolC9t54821H Brassica oleracea HOM05D003862 ORTHO05D004398 1.6e-22 110.2 76 71.1
BraA09t37226Z Brassica rapa HOM05D003862 ORTHO05D004398 1.6e-22 110.2 76 71.1
BcaB07g31364 Brassica carinata HOM05D003862 ORTHO05D004398 2.1e-22 109.8 76 71.1
Manes.01G173900 Manihot esculenta HOM05D003862 ORTHO05D004398 2.1e-22 109.8 62 83.9
Manes.02G133100 Manihot esculenta HOM05D003862 ORTHO05D004398 2.1e-22 109.8 62 83.9
AagrBONN_evm.TU.Sc2ySwM_368.1516 Anthoceros agrestis HOM05D003862 ORTHO05D004398 3.6e-22 109.0 78 65.4
Aqoxy4G02928 Aquilegia oxysepala HOM05D003862 ORTHO05D004398 4.7e-22 108.6 62 80.6
MD03G1093400 Malus domestica HOM05D003862 ORTHO05D004398 4.7e-22 108.6 66 78.8
Pp3c24_15930 Physcomitrium patens HOM05D003862 ORTHO05D004398 4.7e-22 108.6 78 66.7
Hund04959 Selenicereus undatus HOM05D003862 ORTHO05D004398 4.7e-22 108.6 82 64.6
Aa31sc23G440 Aethionema arabicum HOM05D003862 ORTHO05D004398 6.2e-22 108.2 62 80.6
A03p68180 Brassica napus HOM05D003862 ORTHO05D004398 6.2e-22 108.2 76 71.1
BraA01t02647Z Brassica rapa HOM05D003862 ORTHO05D004398 6.2e-22 108.2 76 71.1
VMungo1127G0240 Vigna mungo HOM05D003862 ORTHO05D004398 6.8e-21 104.8 66 77.3
Mapoly0020s0168 Marchantia polymorpha HOM05D003862 ORTHO05D004398 1.5e-20 103.6 64 73.4
Actinidia05313 Actinidia chinensis HOM05D003862 ORTHO05D004398 2.0e-20 103.2 72 69.4
FAN27G3302 Fragaria x ananassa HOM05D003862 ORTHO05D004398 4.4e-20 102.1 62 74.2
Phvul.L001624 Phaseolus vulgaris HOM05D003862 ORTHO05D004398 4.4e-20 102.1 76 64.5
HanXRQChr01g0009491 Helianthus annuus HOM05D003862 ORTHO05D004398 5.8e-20 101.7 73 65.8
Pp3c20_6200 Physcomitrium patens HOM05D003862 ORTHO05D004398 2.2e-19 99.8 78 61.5
SMO367G0781 Selaginella moellendorffii HOM05D003862 ORTHO05D004398 3.7e-19 99.0 62 72.6
ATR0559G041 Amborella trichopoda HOM05D003862 ORTHO05D004398 6.4e-19 98.2 50 88.0
Glyma.03G082300 Glycine max HOM05D003862 ORTHO05D004398 6.4e-19 98.2 76 59.2
arahy.Tifrunner.gnm1.ann1.817FQF Arachis hypogaea HOM05D003862 ORTHO05D004398 1.4e-18 97.1 74 64.9
arahy.Tifrunner.gnm1.ann1.JG2TRE Arachis hypogaea HOM05D003862 ORTHO05D004398 1.4e-18 97.1 74 64.9
arahy.Tifrunner.gnm1.ann1.GD7L84 Arachis hypogaea HOM05D003862 ORTHO05D004398 5.4e-18 95.1 74 63.5
CBR_g46834 Chara braunii HOM05D003862 ORTHO05D004398 5.4e-18 95.1 62 67.7
arahy.Tifrunner.gnm1.ann1.L1N949 Arachis hypogaea HOM05D003862 ORTHO05D004398 1.2e-17 94.0 74 62.2
Lj3g0015625 Lotus japonicus HOM05D003862 ORTHO05D004398 2.1e-17 93.2 76 59.2
PGR004G0102 Punica granatum HOM05D003862 ORTHO05D004398 3.0e-16 89.4 77 61.0
MCO12G250 Micromonas commoda HOM05D003862 ORTHO05D004398 5.1e-16 88.6 61 65.6
Eucgr.A01265 Eucalyptus grandis HOM05D003862 ORTHO05D004398 1.9e-15 86.7 72 62.5
FAN14G4115 Fragaria x ananassa HOM05D003862 ORTHO05D004398 3.3e-15 85.9 46 89.1
TPR.G5603 Trifolium pratense HOM05D003862 ORTHO05D004398 3.3e-15 85.9 62 61.3
Psat7g239120 Pisum sativum HOM05D003862 ORTHO05D004398 4.3e-15 85.5 76 51.3
Peaxi162Scf00165g00129 Petunia axillaris HOM05D003862 ORTHO05D004398 5.6e-15 85.1 47 83.0
Solyc08g048070.1 Solanum lycopersicum HOM05D003862 ORTHO05D004398 5.6e-15 85.1 55 72.7
SalBow2G1777 Salvia bowleyana HOM05D003862 ORTHO05D004398 7.3e-15 84.7 61 65.6
unitig_6.g29269 Utricularia gibba HOM05D003862 ORTHO05D004398 6.2e-14 81.6 62 66.1
unitig_747.g21430 Utricularia gibba HOM05D003862 ORTHO05D004398 6.2e-14 81.6 62 66.1
MBI14_g20103_MAGBIO Magnolia biondii HOM05D003862 ORTHO05D004398 8.9e-13 77.8 40 92.5
PRCOL_00005138 Prasinoderma coloniale HOM05D003862 ORTHO05D004398 9.9e-12 74.3 56 58.9
Cre01.g033400 Chlamydomonas reinhardtii HOM05D003862 ORTHO05D004398 9.2e-10 67.8 53 56.6
Os05g0111100 Oryza sativa ssp. japonica HOM05D003862 ORTHO05D004398 5.6e-07 58.5 62 45.2


User provided reference genes

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