Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_24061 Corylus avellana HOM05D006284 ORTHO05D007793 9.6e-77 290.0 142 100.0
CiPaw.13G097000 Carya illinoinensis HOM05D006284 ORTHO05D007793 1.1e-67 260.0 142 88.0
QL01p032751 Quercus lobata HOM05D006284 ORTHO05D007793 1.3e-65 253.1 141 86.5
Atru.chr3.3846 Acer truncatum HOM05D006284 ORTHO05D007793 7.1e-64 247.3 139 86.3
Dinv03613 Davidia involucrata HOM05D006284 ORTHO05D007793 1.6e-63 246.1 139 84.9
Cpa.g.sc190.6 Carica papaya HOM05D006284 ORTHO05D007793 3.3e-61 238.4 142 81.7
FAN11G1150 Fragaria x ananassa HOM05D006284 ORTHO05D007793 3.3e-61 238.4 140 82.1
FAN21G0749 Fragaria x ananassa HOM05D006284 ORTHO05D007793 3.3e-61 238.4 140 82.1
GSVIVG01025000001 Vitis vinifera HOM05D006284 ORTHO05D007793 3.3e-61 238.4 140 82.1
FAN16G2200 Fragaria x ananassa HOM05D006284 ORTHO05D007793 4.3e-61 238.0 140 82.1
EL10Ac7g15985 Beta vulgaris HOM05D006284 ORTHO05D007793 5.7e-61 237.7 139 79.9
MD11G1144900 Malus domestica HOM05D006284 ORTHO05D007793 7.4e-61 237.3 140 78.6
Medtr4g063500 Medicago truncatula HOM05D006284 ORTHO05D007793 1.3e-60 236.5 142 78.9
arahy.Tifrunner.gnm1.ann1.W3SBYC Arachis hypogaea HOM05D006284 ORTHO05D007793 1.6e-60 236.1 142 79.6
PGR102G0171 Punica granatum HOM05D006284 ORTHO05D007793 1.6e-60 236.1 142 78.9
Aqoxy4G02964 Aquilegia oxysepala HOM05D006284 ORTHO05D007793 2.1e-60 235.7 141 76.6
vmacro14530 Vaccinium macrocarpon HOM05D006284 ORTHO05D007793 2.1e-60 235.7 139 79.9
RcHm_v2.0_Chr5g0063801 Rosa chinensis HOM05D006284 ORTHO05D007793 8.2e-60 233.8 140 81.4
arahy.Tifrunner.gnm1.ann1.6H51DS Arachis hypogaea HOM05D006284 ORTHO05D007793 1.1e-59 233.4 142 78.9
TAR623G0100 Trochodendron aralioides HOM05D006284 ORTHO05D007793 1.1e-59 233.4 136 83.1
Hma1.2p1_1897F.1_g306861 Hydrangea macrophylla HOM05D006284 ORTHO05D007793 1.8e-59 232.6 134 82.8
Rhsim01G0226200 Rhododendron simsii HOM05D006284 ORTHO05D007793 1.8e-59 232.6 139 80.6
Lalb_Chr01g0003741 Lupinus albus HOM05D006284 ORTHO05D007793 2.4e-59 232.3 139 81.3
Prupe.6G080800 Prunus persica HOM05D006284 ORTHO05D007793 3.1e-59 231.9 136 79.4
Duzib168G1259 Durio zibethinus HOM05D006284 ORTHO05D007793 5.3e-59 231.1 143 76.9
Eucgr.B02382 Eucalyptus grandis HOM05D006284 ORTHO05D007793 5.3e-59 231.1 138 81.2
Ca_19180_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 2.0e-58 229.2 141 77.3
Ca_31183_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 2.0e-58 229.2 141 77.3
AL1G17850 Arabidopsis lyrata HOM05D006284 ORTHO05D007793 2.6e-58 228.8 134 81.3
Psat7g217680 Pisum sativum HOM05D006284 ORTHO05D007793 2.6e-58 228.8 141 77.3
Aa31sc281G30 Aethionema arabicum HOM05D006284 ORTHO05D007793 3.4e-58 228.4 139 79.1
Nitab4.5_0001304g0050 Nicotiana tabacum HOM05D006284 ORTHO05D007793 3.4e-58 228.4 137 77.4
Thhalv10009069m.g Eutrema salsugineum HOM05D006284 ORTHO05D007793 5.9e-58 227.6 136 81.6
Potri.001G237500 Populus trichocarpa HOM05D006284 ORTHO05D007793 5.9e-58 227.6 143 76.9
BcaC07g42493 Brassica carinata HOM05D006284 ORTHO05D007793 7.6e-58 227.3 136 81.6
Carub.0001s0699 Capsella rubella HOM05D006284 ORTHO05D007793 7.6e-58 227.3 134 80.6
HanXRQChr15g0493271 Helianthus annuus HOM05D006284 ORTHO05D007793 1.0e-57 226.9 135 81.5
Thecc.09G324900 Theobroma cacao HOM05D006284 ORTHO05D007793 1.3e-57 226.5 143 76.2
AT1G07645 Arabidopsis thaliana HOM05D006284 ORTHO05D007793 2.9e-57 225.3 134 80.6
BcaC07g41981 Brassica carinata HOM05D006284 ORTHO05D007793 2.9e-57 225.3 136 81.6
BcaC07g42491 Brassica carinata HOM05D006284 ORTHO05D007793 2.9e-57 225.3 136 81.6
C08p50410 Brassica napus HOM05D006284 ORTHO05D007793 2.9e-57 225.3 136 81.6
BolC8t52569H Brassica oleracea HOM05D006284 ORTHO05D007793 2.9e-57 225.3 136 81.6
Glyma.12G064500 Glycine max HOM05D006284 ORTHO05D007793 3.8e-57 224.9 139 77.0
MSTRG.15272 Avicennia marina HOM05D006284 ORTHO05D007793 5.0e-57 224.6 135 81.5
A09p66230 Brassica napus HOM05D006284 ORTHO05D007793 5.0e-57 224.6 136 81.6
Phvul.011G065500 Phaseolus vulgaris HOM05D006284 ORTHO05D007793 5.0e-57 224.6 139 77.0
VMungo1127G1430 Vigna mungo HOM05D006284 ORTHO05D007793 5.0e-57 224.6 139 76.3
Oeu041449.2 Olea europaea HOM05D006284 ORTHO05D007793 6.5e-57 224.2 139 77.0
BraA09t41961Z Brassica rapa HOM05D006284 ORTHO05D007793 8.5e-57 223.8 136 81.6
ECA247G3393 Erigeron canadensis HOM05D006284 ORTHO05D007793 8.5e-57 223.8 137 80.3
Sabra16G0143200 Salix brachista HOM05D006284 ORTHO05D007793 8.5e-57 223.8 143 76.2
PSO339G4936 Papaver somniferum HOM05D006284 ORTHO05D007793 1.1e-56 223.4 135 80.7
CAN.G394.47 Capsicum annuum HOM05D006284 ORTHO05D007793 1.9e-56 222.6 135 77.8
COL.COLO4_18479 Corchorus olitorius HOM05D006284 ORTHO05D007793 1.9e-56 222.6 143 74.1
Migut.L00518 Erythranthe guttata HOM05D006284 ORTHO05D007793 2.5e-56 222.2 135 80.0
Nitab4.5_0001838g0030 Nicotiana tabacum HOM05D006284 ORTHO05D007793 2.5e-56 222.2 137 75.2
Actinidia33860 Actinidia chinensis HOM05D006284 ORTHO05D007793 3.2e-56 221.9 138 76.8
Os03g0277500 Oryza sativa ssp. japonica HOM05D006284 ORTHO05D007793 3.2e-56 221.9 132 78.0
CANSAT54G2008 Cannabis sativa HOM05D006284 ORTHO05D007793 5.5e-56 221.1 143 74.8
Sed0023805 Sechium edule HOM05D006284 ORTHO05D007793 5.5e-56 221.1 139 76.3
Peaxi162Scf00679g00212 Petunia axillaris HOM05D006284 ORTHO05D007793 9.3e-56 220.3 136 77.9
Sopen06g032410 Solanum pennellii HOM05D006284 ORTHO05D007793 1.2e-55 219.9 135 77.0
CARHR007450 Cardamine hirsuta HOM05D006284 ORTHO05D007793 1.6e-55 219.5 134 78.4
Oeu056746.1 Olea europaea HOM05D006284 ORTHO05D007793 1.6e-55 219.5 139 74.1
PGSC0003DMG400030315 Solanum tuberosum HOM05D006284 ORTHO05D007793 1.6e-55 219.5 135 77.8
Solyc06g075990.4 Solanum lycopersicum HOM05D006284 ORTHO05D007793 2.1e-55 219.2 134 76.9
BraA06t23686Z Brassica rapa HOM05D006284 ORTHO05D007793 2.7e-55 218.8 141 77.3
A06p04820 Brassica napus HOM05D006284 ORTHO05D007793 3.6e-55 218.4 137 78.8
Sp1g06380 Schrenkiella parvula HOM05D006284 ORTHO05D007793 3.6e-55 218.4 136 78.7
Lsat_1_v5_gn_5_183840 Lactuca sativa HOM05D006284 ORTHO05D007793 4.6e-55 218.0 135 80.0
PSO384G0339 Papaver somniferum HOM05D006284 ORTHO05D007793 4.6e-55 218.0 135 79.3
Manes.11G132300 Manihot esculenta HOM05D006284 ORTHO05D007793 6.1e-55 217.6 139 74.8
BcaC07g42490 Brassica carinata HOM05D006284 ORTHO05D007793 1.0e-54 216.9 137 80.3
C05p05670 Brassica napus HOM05D006284 ORTHO05D007793 1.3e-54 216.5 137 78.1
BolC5t29337H Brassica oleracea HOM05D006284 ORTHO05D007793 1.3e-54 216.5 137 78.1
AUR62009602 Chenopodium quinoa HOM05D006284 ORTHO05D007793 1.3e-54 216.5 139 74.8
ClCG02G020310 Citrullus lanatus HOM05D006284 ORTHO05D007793 1.3e-54 216.5 142 73.2
Gorai.009G100800 Gossypium raimondii HOM05D006284 ORTHO05D007793 1.8e-54 216.1 143 72.7
DCAR_015613 Daucus carota HOM05D006284 ORTHO05D007793 3.9e-54 214.9 137 75.2
Gohir.A05G097100 Gossypium hirsutum HOM05D006284 ORTHO05D007793 3.9e-54 214.9 143 72.0
Lj3g0026697 Lotus japonicus HOM05D006284 ORTHO05D007793 3.9e-54 214.9 135 77.0
MELO3C013690.2 Cucumis melo HOM05D006284 ORTHO05D007793 6.7e-54 214.2 142 71.8
Lsat_1_v5_gn_9_22581 Lactuca sativa HOM05D006284 ORTHO05D007793 8.7e-54 213.8 135 78.5
CsaV3_6G017010 Cucumis sativus L. HOM05D006284 ORTHO05D007793 7.4e-53 210.7 142 70.4
SalBow5G5166 Salvia bowleyana HOM05D006284 ORTHO05D007793 9.7e-53 210.3 135 77.0
AUR62001816 Chenopodium quinoa HOM05D006284 ORTHO05D007793 3.7e-52 208.4 135 74.1
Sc06g0008270 Simmondsia chinensis HOM05D006284 ORTHO05D007793 6.3e-52 207.6 135 71.9
Gohir.D05G097250 Gossypium hirsutum HOM05D006284 ORTHO05D007793 1.1e-51 206.8 143 69.2
THA.LOC104800652 Tarenaya hassleriana HOM05D006284 ORTHO05D007793 1.4e-51 206.5 138 72.5
Migut.L00567 Erythranthe guttata HOM05D006284 ORTHO05D007793 1.8e-51 206.1 128 78.1
SHI00991 Sapria himalayana HOM05D006284 ORTHO05D007793 3.8e-49 198.4 142 66.2
TWI79G0071 Tripterygium wilfordii HOM05D006284 ORTHO05D007793 1.1e-48 196.8 142 72.5
SGA_v2.0_scaffold606G53170 Striga asiatica HOM05D006284 ORTHO05D007793 4.2e-48 194.9 133 73.7
Gohir.A07G096400 Gossypium hirsutum HOM05D006284 ORTHO05D007793 2.3e-46 189.1 162 61.7
Ciclev10029580m.g Citrus clementina HOM05D006284 ORTHO05D007793 2.8e-44 182.2 114 79.8
Zm00001eb012550 Zea mays HOM05D006284 ORTHO05D007793 3.4e-42 175.3 130 64.6
MBI14_g11686_MAGBIO Magnolia biondii HOM05D006284 ORTHO05D007793 1.2e-39 166.8 136 62.5
Gorai.001G108700 Gossypium raimondii HOM05D006284 ORTHO05D007793 2.1e-39 166.0 131 67.2
Mapoly0004s0146 Marchantia polymorpha HOM05D006284 ORTHO05D007793 3.6e-39 165.2 127 63.0
Gohir.D07G100800 Gossypium hirsutum HOM05D006284 ORTHO05D007793 4.7e-39 164.9 157 59.2
FvH4_3g35580 Fragaria vesca HOM05D006284 ORTHO05D007793 7.9e-39 164.1 140 64.3
SMO165G0091 Selaginella moellendorffii HOM05D006284 ORTHO05D007793 2.3e-38 162.5 132 56.1
Lj2A1058T40 Lonicera japonica HOM05D006284 ORTHO05D007793 4.4e-37 158.3 94 79.8
CSS0000036 Camellia sinensis var. sinensis HOM05D006284 ORTHO05D007793 4.8e-36 154.8 139 60.4
Oeu033642.1 Olea europaea HOM05D006284 ORTHO05D007793 6.3e-36 154.5 102 70.6
Oeu056758.1 Olea europaea HOM05D006284 ORTHO05D007793 3.1e-35 152.1 96 74.0
TPR.G10205 Trifolium pratense HOM05D006284 ORTHO05D007793 2.6e-34 149.1 96 76.0
FAN11G3292 Fragaria x ananassa HOM05D006284 ORTHO05D007793 4.5e-34 148.3 140 60.0
DCAR_018897 Daucus carota HOM05D006284 ORTHO05D007793 1.0e-33 147.1 99 68.7
Oeu056739.1 Olea europaea HOM05D006284 ORTHO05D007793 5.5e-32 141.4 136 55.9
Oeu056743.1 Olea europaea HOM05D006284 ORTHO05D007793 5.5e-32 141.4 97 67.0
Peaxi162Scf00406g00314 Petunia axillaris HOM05D006284 ORTHO05D007793 1.4e-22 110.2 139 46.8
AagrBONN_evm.TU.Sc2ySwM_117.384 Anthoceros agrestis HOM05D006284 ORTHO05D007793 1.8e-22 109.8 132 43.9
SEGI_15500 Sequoiadendron giganteum HOM05D006284 ORTHO05D007793 1.5e-21 106.7 104 56.7
FvH4_3g35610 Fragaria vesca HOM05D006284 ORTHO05D007793 1.7e-20 103.2 140 45.7
AagrBONN_evm.TU.Sc2ySwM_344.4820 Anthoceros agrestis HOM05D006284 ORTHO05D007793 1.1e-19 100.5 91 51.6
AagrBONN_evm.TU.Sc2ySwM_344.4822 Anthoceros agrestis HOM05D018382 ORTHO05D001873 7.0e-19 97.8 118 42.4
MD07G1053700 Malus domestica HOM05D006284 ORTHO05D007793 2.0e-18 96.3 62 71.0
MD14G1025700 Malus domestica HOM05D006284 ORTHO05D007793 5.0e-17 91.7 62 67.7
Pp3c19_1590 Physcomitrium patens HOM05D006284 ORTHO05D007793 1.5e-16 90.1 126 39.7
CANSAT21G1079 Cannabis sativa HOM05D002411 ORTHO05D002564 3.3e-16 89.0 60 68.3
Cc01_g12610 Coffea canephora HOM05D006284 ORTHO05D007793 6.1e-15 84.7 44 90.9
TPR.G10968 Trifolium pratense HOM05D006284 ORTHO05D007793 3.0e-14 82.4 46 82.6
Cc01_g12620 Coffea canephora HOM05D006284 ORTHO05D007793 1.3e-09 67.0 35 82.9
ATR0559G308 Amborella trichopoda HOM05D006284 ORTHO05D007793 2.3e-09 66.2 37 78.4
Ah.08g219180 Amaranthus hybridus HOM05D006284 ORTHO05D007793 7.3e-08 61.2 39 74.4
SEGI_40910 Sequoiadendron giganteum HOM05D006284 ORTHO05D007793 8.0e-07 57.8 51 51.0


User provided reference genes

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