Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_24007 Corylus avellana HOM05D006681 ORTHO05D008338 6.1e-263 910.2 444 100.0
Cfa011429 Carpinus fangiana HOM05D006681 ORTHO05D008338 6.0e-117 425.2 465 55.7
CiPaw.13G101600 Carya illinoinensis HOM05D006681 ORTHO05D008338 1.9e-99 367.1 460 50.2
QL01p034239 Quercus lobata HOM05D006681 ORTHO05D008338 2.5e-91 340.1 459 47.7
Atru.chr3.3798 Acer truncatum HOM05D006681 ORTHO05D008338 5.3e-89 332.4 459 45.3
TAR633G1649 Trochodendron aralioides HOM05D006681 ORTHO05D008338 1.2e-88 331.3 462 44.4
Lalb_Chr03g0026931 Lupinus albus HOM05D006681 ORTHO05D008338 2.0e-88 330.5 440 45.2
Ciclev10028948m.g Citrus clementina HOM05D006681 ORTHO05D008338 4.9e-87 325.9 458 46.1
Gorai.009G102400 Gossypium raimondii HOM05D006681 ORTHO05D008338 4.9e-87 325.9 450 46.0
TWI31G0387 Tripterygium wilfordii HOM05D006681 ORTHO05D008338 8.4e-87 325.1 457 43.8
Potri.009G026700 Populus trichocarpa HOM05D006681 ORTHO05D008338 1.4e-86 324.3 442 46.6
Gohir.D05G098750 Gossypium hirsutum HOM05D006681 ORTHO05D008338 1.9e-86 323.9 450 45.8
Gohir.A05G098700 Gossypium hirsutum HOM05D006681 ORTHO05D008338 3.2e-86 323.2 450 45.8
CSS0025304 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 1.2e-85 321.2 462 45.0
CSS0007914 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 3.5e-85 319.7 462 44.8
GSVIVG01025054001 Vitis vinifera HOM05D006681 ORTHO05D008338 3.5e-85 319.7 443 44.5
Lj3g0002575 Lotus japonicus HOM05D006681 ORTHO05D008338 1.3e-84 317.8 446 44.6
Medtr4g062130 Medicago truncatula HOM05D006681 ORTHO05D008338 1.8e-84 317.4 460 44.1
PGR119G1802 Punica granatum HOM05D006681 ORTHO05D008338 1.8e-84 317.4 451 43.5
Rhsim13G0088300 Rhododendron simsii HOM05D006681 ORTHO05D008338 2.3e-84 317.0 460 44.6
Nn2g10531 Nelumbo nucifera HOM05D006681 ORTHO05D008338 3.0e-84 316.6 442 43.4
COL.COLO4_18427 Corchorus olitorius HOM05D006681 ORTHO05D008338 6.7e-84 315.5 442 44.1
FAN11G3596 Fragaria x ananassa HOM05D006681 ORTHO05D008338 8.7e-84 315.1 451 45.0
FvH4_3g34680 Fragaria vesca HOM05D006681 ORTHO05D008338 1.1e-83 314.7 451 45.0
FAN16G0358 Fragaria x ananassa HOM05D006681 ORTHO05D008338 1.5e-83 314.3 442 45.5
Phvul.011G069100 Phaseolus vulgaris HOM05D006681 ORTHO05D008338 1.5e-83 314.3 451 43.9
TPR.G3006 Trifolium pratense HOM05D006681 ORTHO05D008338 1.5e-83 314.3 443 44.7
arahy.Tifrunner.gnm1.ann1.FZI6FG Arachis hypogaea HOM05D006681 ORTHO05D008338 2.5e-83 313.5 458 42.6
arahy.Tifrunner.gnm1.ann1.SK7GFS Arachis hypogaea HOM05D006681 ORTHO05D008338 2.5e-83 313.5 457 42.7
Thecc.09G329700 Theobroma cacao HOM05D006681 ORTHO05D008338 3.3e-83 313.2 440 45.2
Sabra09G0017800 Salix brachista HOM05D006681 ORTHO05D008338 4.3e-83 312.8 441 45.4
MD11G1116600 Malus domestica HOM05D006681 ORTHO05D008338 1.3e-82 311.2 439 44.4
Oeu040277.1 Olea europaea HOM05D006681 ORTHO05D008338 1.3e-82 311.2 460 44.3
RcHm_v2.0_Chr5g0062361 Rosa chinensis HOM05D006681 ORTHO05D008338 1.3e-82 311.2 442 45.7
Psat7g220640 Pisum sativum HOM05D006681 ORTHO05D008338 2.8e-82 310.1 460 43.7
CANSAT54G2145 Cannabis sativa HOM05D006681 ORTHO05D008338 4.8e-82 309.3 459 43.1
Sed0010670 Sechium edule HOM05D006681 ORTHO05D008338 4.8e-82 309.3 445 44.3
Ca_19209_v3 Cicer arietinum L. HOM05D006681 ORTHO05D008338 8.2e-82 308.5 454 43.4
Duzib170G0311 Durio zibethinus HOM05D006681 ORTHO05D008338 1.5e-80 304.3 460 43.0
Cc01_g12140 Coffea canephora HOM05D006681 ORTHO05D008338 1.0e-79 301.6 443 43.8
Prupe.6G086900 Prunus persica HOM05D006681 ORTHO05D008338 1.0e-79 301.6 439 43.7
ECA236G1321 Erigeron canadensis HOM05D006681 ORTHO05D008338 8.4e-79 298.5 442 42.5
EL10Ac7g15941 Beta vulgaris HOM05D006681 ORTHO05D008338 1.1e-78 298.1 455 42.0
SalBow3G4078 Salvia bowleyana HOM05D006681 ORTHO05D008338 5.5e-78 295.8 459 41.8
VMungo1127G1059 Vigna mungo HOM05D006681 ORTHO05D008338 7.1e-78 295.4 467 41.3
FAN21G0481 Fragaria x ananassa HOM05D006681 ORTHO05D008338 2.1e-77 293.9 474 42.8
Migut.D02146 Erythranthe guttata HOM05D006681 ORTHO05D008338 2.7e-77 293.5 456 41.4
Lj1A175T11 Lonicera japonica HOM05D006681 ORTHO05D008338 3.5e-77 293.1 439 42.8
Eucgr.J02098 Eucalyptus grandis HOM05D006681 ORTHO05D008338 4.6e-77 292.7 455 40.2
CsaV3_6G022080 Cucumis sativus L. HOM05D006681 ORTHO05D008338 6.1e-77 292.4 456 41.0
Sopen11g030630 Solanum pennellii HOM05D006681 ORTHO05D008338 6.1e-77 292.4 440 42.7
HanXRQChr05g0134071 Helianthus annuus HOM05D006681 ORTHO05D008338 1.3e-76 291.2 436 42.2
THA.LOC104814870 Tarenaya hassleriana HOM05D006681 ORTHO05D008338 1.8e-76 290.8 436 42.2
PGSC0003DMG400015551 Solanum tuberosum HOM05D006681 ORTHO05D008338 2.3e-76 290.4 440 42.7
CAN.G1647.1 Capsicum annuum HOM05D006681 ORTHO05D008338 3.9e-76 289.7 436 42.2
Glyma.12G075000 Glycine max HOM05D006681 ORTHO05D008338 3.9e-76 289.7 444 42.3
DCAR_006014 Daucus carota HOM05D006681 ORTHO05D008338 6.7e-76 288.9 446 41.0
MBI14_g35939_MAGBIO Magnolia biondii HOM05D006681 ORTHO05D008338 6.7e-76 288.9 459 40.3
Solyc11g072970.2 Solanum lycopersicum HOM05D006681 ORTHO05D008338 1.1e-75 288.1 440 42.3
Lsat_1_v5_gn_8_78740 Lactuca sativa HOM05D006681 ORTHO05D008338 7.4e-75 285.4 442 41.4
Aqoxy4G03072 Aquilegia oxysepala HOM05D006681 ORTHO05D008338 1.3e-74 284.6 441 40.8
ClCG02G020630 Citrullus lanatus HOM05D006681 ORTHO05D008338 1.3e-74 284.6 501 39.7
Peaxi162Scf00411g00068 Petunia axillaris HOM05D006681 ORTHO05D008338 6.3e-74 282.3 441 41.5
MSTRG.18607 Avicennia marina HOM05D006681 ORTHO05D008338 3.1e-73 280.0 459 41.0
vmacro03125 Vaccinium macrocarpon HOM05D006681 ORTHO05D008338 6.9e-73 278.9 454 42.5
Thhalv10002615m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 5.9e-72 275.8 442 40.0
AT3G46200 Arabidopsis thaliana HOM05D006681 ORTHO05D008338 2.2e-71 273.9 442 39.4
Manes.11G136100 Manihot esculenta HOM05D006681 ORTHO05D008338 3.8e-71 273.1 443 42.0
AL5G24960 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 8.5e-71 271.9 438 39.3
AUR62001852 Chenopodium quinoa HOM05D006681 ORTHO05D008338 1.1e-70 271.6 436 40.1
PSO339G5789 Papaver somniferum HOM05D006681 ORTHO05D008338 1.9e-70 270.8 465 39.8
HPP92_006593 Vanilla planifolia HOM05D006681 ORTHO05D008338 4.2e-70 269.6 448 37.9
Aa31LG4G15300 Aethionema arabicum HOM05D006681 ORTHO05D008338 1.6e-69 267.7 497 36.6
PSO384G0101 Papaver somniferum HOM05D006681 ORTHO05D008338 1.6e-69 267.7 443 39.7
SGA_v2.0_scaffold134G34764 Striga asiatica HOM05D006681 ORTHO05D008338 1.6e-69 267.7 391 44.2
Carub.0005s1203 Capsella rubella HOM05D006681 ORTHO05D008338 2.7e-69 266.9 442 38.5
Os05g0117500 Oryza sativa ssp. japonica HOM05D006681 ORTHO05D008338 4.6e-69 266.2 454 38.5
BraA06t25188Z Brassica rapa HOM05D006681 ORTHO05D008338 6.7e-68 262.3 441 39.0
A06p21000 Brassica napus HOM05D006681 ORTHO05D008338 2.5e-67 260.4 441 38.8
C03p70520 Brassica napus HOM05D006681 ORTHO05D008338 3.3e-67 260.0 441 39.2
BolC3t19336H Brassica oleracea HOM05D006681 ORTHO05D008338 3.3e-67 260.0 441 39.2
Sp5g15430 Schrenkiella parvula HOM05D006681 ORTHO05D008338 7.4e-67 258.8 441 38.3
BcaC01g01926 Brassica carinata HOM05D006681 ORTHO05D008338 9.7e-67 258.5 441 38.5
Zm00001eb266060 Zea mays HOM05D006681 ORTHO05D008338 2.2e-66 257.3 445 38.2
Nitab4.5_0002684g0160 Nicotiana tabacum HOM05D006681 ORTHO05D008338 2.0e-64 250.8 443 39.5
Ah.08g214980 Amaranthus hybridus HOM05D006681 ORTHO05D008338 4.5e-64 249.6 439 38.0
FAN25G3219 Fragaria x ananassa HOM05D006681 ORTHO05D008338 7.7e-64 248.8 448 40.6
Dinv32860 Davidia involucrata HOM05D006681 ORTHO05D008338 9.4e-62 241.9 355 44.5
Carub.0003s2829 Capsella rubella HOM05D006681 ORTHO05D008338 1.0e-60 238.4 431 36.0
Lj3g0011020 Lotus japonicus HOM05D006681 ORTHO05D008338 1.7e-58 231.1 213 59.6
Thhalv10002633m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 2.0e-56 224.2 442 36.2
MELO3C013668.2 Cucumis melo HOM05D006681 ORTHO05D008338 2.9e-55 220.3 405 37.5
AUR62009646 Chenopodium quinoa HOM05D006681 ORTHO05D008338 6.5e-55 219.2 423 36.2
Duzib168G1095 Durio zibethinus HOM05D006681 ORTHO05D008338 4.2e-54 216.5 454 35.5
Nitab4.5_0002684g0190 Nicotiana tabacum HOM05D006681 ORTHO05D008338 1.8e-52 211.1 386 39.1
Sc06g0008190 Simmondsia chinensis HOM05D006681 ORTHO05D008338 6.7e-52 209.1 204 54.9
Nitab4.5_0001953g0020 Nicotiana tabacum HOM05D006681 ORTHO05D008338 3.3e-51 206.8 201 57.7
Pp3c11_23040 Physcomitrium patens HOM05D006681 ORTHO05D008338 3.7e-50 203.4 452 32.7
Cpa.g.sc2126.1 Carica papaya HOM05D006681 ORTHO05D008338 8.2e-50 202.2 336 39.9
AagrBONN_evm.TU.Sc2ySwM_228.1772 Anthoceros agrestis HOM05D006681 ORTHO05D008338 7.7e-48 195.7 434 31.8
SMO367G0798 Selaginella moellendorffii HOM05D006681 ORTHO05D008338 2.5e-46 190.7 432 31.9
Mapoly0128s0008 Marchantia polymorpha HOM05D006681 ORTHO05D008338 1.4e-44 184.9 438 32.0
Nitab4.5_0001953g0050 Nicotiana tabacum HOM05D006681 ORTHO05D008338 6.3e-42 176.0 418 32.8
SEGI_27570 Sequoiadendron giganteum HOM05D006681 ORTHO05D008338 2.7e-40 170.6 238 45.0
Nitab4.5_0000766g0030 Nicotiana tabacum HOM05D006681 ORTHO05D008338 5.9e-40 169.5 127 68.5
Pp3c11_23047 Physcomitrium patens HOM05D006681 ORTHO05D008338 6.1e-37 159.5 197 44.7
CBR_g415 Chara braunii HOM05D006681 ORTHO05D008338 2.8e-34 150.6 436 30.7
Hund05017 Selenicereus undatus HOM05D006681 ORTHO05D008338 1.3e-31 141.7 444 28.6
AL1G56400 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 7.2e-30 136.0 315 32.4
Sc06g0008200 Simmondsia chinensis HOM05D006681 ORTHO05D008338 1.6e-29 134.8 115 60.9
Glyma.11G145018 Glycine max HOM05D006681 ORTHO05D008338 1.0e-28 132.1 135 53.3
ATR0759G055 Amborella trichopoda HOM05D006681 ORTHO05D008338 3.2e-25 120.6 115 53.9
MD03G1102800 Malus domestica HOM05D006681 ORTHO05D008338 5.2e-20 103.2 86 65.1
Actinidia20468 Actinidia chinensis HOM05D006681 ORTHO05D008338 6.4e-18 96.3 61 75.4
CAN.G1289.2 Capsicum annuum HOM05D006681 ORTHO05D008338 1.2e-16 92.0 229 32.3
CDE08G1356 Ceratophyllum demersum HOM05D006681 ORTHO05D008338 2.1e-13 81.3 91 46.2
Nitab4.5_0001068g0110 Nicotiana tabacum HOM05D006681 ORTHO05D008338 4.7e-13 80.1 52 76.9
PRCOL_00001211 Prasinoderma coloniale HOM05D006681 ORTHO05D008338 1.8e-12 78.2 491 23.0
MCO11G760 Micromonas commoda HOM05D006681 ORTHO05D008338 1.7e-07 61.6 138 30.4
CARHR154620 Cardamine hirsuta HOM05D006681 ORTHO05D008338 8.6e-07 59.3 41 63.4


User provided reference genes

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