Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_23934 Corylus avellana HOM05D015347 ORTHO05D022423 3.7e-97 358.2 183 100.0
Haze_10346 Corylus avellana HOM05D015347 ORTHO05D022423 7.0e-96 354.0 183 98.4
Haze_06173 Corylus avellana HOM05D015347 ORTHO05D022423 2.4e-80 302.4 180 88.3
Haze_10343 Corylus avellana HOM05D015347 ORTHO05D000384 5.1e-54 214.9 153 77.1
Cfa013736 Carpinus fangiana HOM05D000375 ORTHO05D000240 1.8e-27 126.7 78 83.3
Haze_22383 Corylus avellana HOM05D000375 ORTHO05D000240 1.8e-27 126.7 78 83.3
Haze_09948 Corylus avellana HOM05D015347 ORTHO05D022423 4.0e-27 125.6 90 77.8
Haze_08277 Corylus avellana HOM05D015347 ORTHO05D165007 7.6e-26 121.3 127 60.6
Haze_08282 Corylus avellana HOM05D015347 ORTHO05D165088 7.6e-26 121.3 127 60.6
Haze_05824 Corylus avellana HOM05D015347 ORTHO05D000384 1.1e-21 107.5 69 81.2
CiPaw.08G052500 Carya illinoinensis HOM05D000375 ORTHO05D000240 1.5e-21 107.1 78 74.4
Haze_18161 Corylus avellana HOM05D000521 ORTHO05D000384 9.6e-21 104.4 73 74.0
Cfa017969 Carpinus fangiana HOM05D000521 ORTHO05D000384 2.1e-20 103.2 73 71.2
Thecc.08G084400 Theobroma cacao HOM05D000375 ORTHO05D000240 2.1e-20 103.2 85 67.1
Duzib041G0371 Durio zibethinus HOM05D000375 ORTHO05D000240 8.2e-20 101.3 84 65.5
QL09p015199 Quercus lobata HOM05D000375 ORTHO05D000240 2.4e-19 99.8 79 70.9
Dinv44930 Davidia involucrata HOM05D000375 ORTHO05D000240 7.6e-18 94.7 83 62.7
TAR625G1492 Trochodendron aralioides HOM05D000375 ORTHO05D000240 7.6e-18 94.7 72 66.7
TAR628G0197 Trochodendron aralioides HOM05D000375 ORTHO05D000240 1.3e-17 94.0 72 69.4
TAR381G1136 Trochodendron aralioides HOM05D000375 ORTHO05D000240 1.7e-17 93.6 72 68.1
Duzib093G0884 Durio zibethinus HOM05D000375 ORTHO05D000240 2.9e-17 92.8 86 61.6
Duzib116G0047 Durio zibethinus HOM05D000375 ORTHO05D000240 3.8e-17 92.4 90 58.9
Dinv39205 Davidia involucrata HOM05D000375 ORTHO05D000240 4.9e-17 92.0 94 59.6
Nn5g30665 Nelumbo nucifera HOM05D000375 ORTHO05D000240 4.2e-16 89.0 94 51.1
Gorai.009G222200 Gossypium raimondii HOM05D000375 ORTHO05D000240 2.1e-15 86.7 107 48.6
Haze_10823 Corylus avellana HOM05D015347 ORTHO05D163823 3.5e-15 85.9 45 93.3
Gohir.A05G212300 Gossypium hirsutum HOM05D000375 ORTHO05D000240 3.5e-15 85.9 108 49.1
Gohir.D02G088000 Gossypium hirsutum HOM05D000375 ORTHO05D000240 3.5e-15 85.9 84 57.1
Gohir.D05G215500 Gossypium hirsutum HOM05D000375 ORTHO05D000240 3.5e-15 85.9 107 48.6
Gorai.005G098700 Gossypium raimondii HOM05D000375 ORTHO05D000240 3.5e-15 85.9 84 57.1
COL.COLO4_28458 Corchorus olitorius HOM05D000375 ORTHO05D000240 6.0e-15 85.1 83 62.7
Gohir.A02G080200 Gossypium hirsutum HOM05D000375 ORTHO05D000240 6.0e-15 85.1 84 57.1
Phvul.001G031000 Phaseolus vulgaris HOM05D000375 ORTHO05D000240 3.0e-14 82.8 83 56.6
TWI36G1750 Tripterygium wilfordii HOM05D000375 ORTHO05D000240 5.1e-14 82.0 69 65.2
VMungo0647G2100 Vigna mungo HOM05D000375 ORTHO05D000240 5.1e-14 82.0 83 56.6
COL.COLO4_16458 Corchorus olitorius HOM05D000375 ORTHO05D022423 6.7e-14 81.6 89 59.6
TAR376G0980 Trochodendron aralioides HOM05D000375 ORTHO05D000240 5.7e-13 78.6 78 59.0
Prupe.1G419000 Prunus persica HOM05D000375 ORTHO05D000240 9.7e-13 77.8 73 63.0
Manes.18G049600 Manihot esculenta HOM05D000375 ORTHO05D000240 1.3e-12 77.4 82 58.5
QL02p000896 Quercus lobata HOM05D000521 ORTHO05D000384 1.3e-12 77.4 72 59.7
TWI12G0390 Tripterygium wilfordii HOM05D000375 ORTHO05D000240 1.3e-12 77.4 69 65.2
Cc10_g07650 Coffea canephora HOM05D000375 ORTHO05D000240 1.6e-12 77.0 109 49.5
Glyma.08G265700 Glycine max HOM05D000375 ORTHO05D022423 3.7e-12 75.9 103 50.5
Glyma.17G232700 Glycine max HOM05D000375 ORTHO05D000240 3.7e-12 75.9 103 49.5
Glyma.17G232600 Glycine max HOM05D000375 ORTHO05D000240 6.3e-12 75.1 103 48.5
Prupe.1G409800 Prunus persica HOM05D000521 ORTHO05D000384 1.8e-11 73.6 73 56.2
Lalb_Chr14g0368051 Lupinus albus HOM05D000375 ORTHO05D000240 3.1e-11 72.8 94 56.4
FAN27G0847 Fragaria x ananassa HOM05D000521 ORTHO05D000384 4.5e-10 68.9 74 55.4
Eucgr.F00097 Eucalyptus grandis HOM05D000375 ORTHO05D000240 5.9e-10 68.6 85 49.4
Glyma.14G089090 Glycine max HOM05D000375 ORTHO05D000240 5.9e-10 68.6 103 46.6
PSO170G1517 Papaver somniferum HOM05D000375 ORTHO05D000240 2.2e-09 66.6 103 45.6
CDE04G2604 Ceratophyllum demersum HOM05D000375 ORTHO05D000240 2.9e-09 66.2 108 43.5
GSVIVG01007165001 Vitis vinifera HOM05D000375 ORTHO05D000240 3.8e-09 65.9 78 50.0
TAR624G0114 Trochodendron aralioides HOM05D000521 ORTHO05D000384 6.5e-09 65.1 65 53.8
FAN15G0505 Fragaria x ananassa HOM05D000375 ORTHO05D000240 1.9e-08 63.5 82 56.1
Gorai.010G027700 Gossypium raimondii HOM05D000375 ORTHO05D000240 1.9e-08 63.5 88 53.4
PSO017G0674 Papaver somniferum HOM05D000375 ORTHO05D000240 1.9e-08 63.5 103 44.7
CDE07G1525 Ceratophyllum demersum HOM05D000375 ORTHO05D000240 2.5e-08 63.2 108 42.6
Manes.05G183900 Manihot esculenta HOM05D000375 ORTHO05D000240 2.5e-08 63.2 185 34.6
RcHm_v2.0_Chr6g0310051 Rosa chinensis HOM05D000375 ORTHO05D000240 2.5e-08 63.2 82 47.6
TAR636G0778 Trochodendron aralioides HOM05D000521 ORTHO05D000384 2.5e-08 63.2 73 46.6
FAN27G1555 Fragaria x ananassa HOM05D000375 ORTHO05D000240 3.2e-08 62.8 82 54.9
Cfa004387 Carpinus fangiana HOM05D000375 ORTHO05D000240 4.2e-08 62.4 80 50.0
FvH4_2g31640 Fragaria vesca HOM05D000521 ORTHO05D000384 4.2e-08 62.4 74 51.4
FvH4_2g32670 Fragaria vesca HOM05D000375 ORTHO05D000240 4.2e-08 62.4 82 54.9
FAN20G2934 Fragaria x ananassa HOM05D000375 ORTHO05D000240 4.2e-08 62.4 82 54.9
FAN24G1334 Fragaria x ananassa HOM05D000375 ORTHO05D000240 4.2e-08 62.4 82 54.9
FAN24G2325 Fragaria x ananassa HOM05D000521 ORTHO05D000384 4.2e-08 62.4 74 51.4
Lalb_Chr08g0245191 Lupinus albus HOM05D000375 ORTHO05D000240 4.2e-08 62.4 76 55.3
Potri.014G012800 Populus trichocarpa HOM05D000375 ORTHO05D000240 5.5e-08 62.0 89 50.6
Actinidia29634 Actinidia chinensis HOM05D000375 ORTHO05D000240 7.2e-08 61.6 65 55.4
Gohir.A05G263400 Gossypium hirsutum HOM05D000375 ORTHO05D000240 7.2e-08 61.6 88 51.1
Manes.03G049700 Manihot esculenta HOM05D000521 ORTHO05D000384 7.2e-08 61.6 71 43.7
Gohir.A06G026000 Gossypium hirsutum HOM05D000375 ORTHO05D000240 9.4e-08 61.2 88 52.3
Gohir.D06G023100 Gossypium hirsutum HOM05D000375 ORTHO05D000240 1.2e-07 60.8 88 52.3
Lj5g0013108 Lotus japonicus HOM05D000375 ORTHO05D000240 1.2e-07 60.8 45 66.7
QL06p038945 Quercus lobata HOM05D000375 ORTHO05D000240 1.2e-07 60.8 79 49.4
Dinv23044 Davidia involucrata HOM05D000375 ORTHO05D000240 1.6e-07 60.5 94 47.9
MBI16_g06078_MAGBIO Magnolia biondii HOM05D000375 ORTHO05D000240 2.1e-07 60.1 78 44.9
Gorai.009G277500 Gossypium raimondii HOM05D000375 ORTHO05D000240 2.7e-07 59.7 88 52.3
RcHm_v2.0_Chr6g0311181 Rosa chinensis HOM05D000521 ORTHO05D000384 2.7e-07 59.7 52 63.5
Aqoxy5G04212 Aquilegia oxysepala HOM05D000375 ORTHO05D000240 4.6e-07 58.9 75 49.3
Haze_15026 Corylus avellana HOM05D000375 ORTHO05D000240 6.1e-07 58.5 80 48.8
Thhalv10025033m.g Eutrema salsugineum HOM05D000521 ORTHO05D000384 6.1e-07 58.5 74 45.9
Lalb_Chr22g0355801 Lupinus albus HOM05D000375 ORTHO05D000240 6.1e-07 58.5 64 53.1
BcaB03g12773 Brassica carinata HOM05D000521 ORTHO05D000384 7.9e-07 58.2 74 44.6
Carub.0007s0740 Capsella rubella HOM05D000521 ORTHO05D000384 7.9e-07 58.2 74 44.6
Duzib187G1998 Durio zibethinus HOM05D000375 ORTHO05D000240 7.9e-07 58.2 92 42.4
Sp7g30810 Schrenkiella parvula HOM05D000521 ORTHO05D000384 7.9e-07 58.2 74 45.9
Thecc.09G085800 Theobroma cacao HOM05D000521 ORTHO05D000384 7.9e-07 58.2 68 50.0
TAR383G1067 Trochodendron aralioides HOM05D000521 ORTHO05D000384 7.9e-07 58.2 73 45.2
Gohir.D05G265700 Gossypium hirsutum HOM05D000375 ORTHO05D000240 1.0e-06 57.8 88 51.1
Potri.018G061901 Populus trichocarpa HOM05D000521 ORTHO05D000384 1.0e-06 57.8 57 54.4
C03p86840 Brassica napus HOM05D000521 ORTHO05D000384 1.4e-06 57.4 42 66.7
BolC3t20978H Brassica oleracea HOM05D000521 ORTHO05D000384 1.4e-06 57.4 42 66.7
Potri.014G007200 Populus trichocarpa HOM05D000375 ORTHO05D000240 1.4e-06 57.4 81 44.4
THA.LOC104803722 Tarenaya hassleriana HOM05D000521 ORTHO05D000384 1.4e-06 57.4 108 38.9
AT4G33050 Arabidopsis thaliana HOM05D000521 ORTHO05D000384 1.8e-06 57.0 110 34.5
Cpa.g.sc1729.1 Carica papaya HOM05D000375 ORTHO05D000240 1.8e-06 57.0 57 63.2
ClCG01G017800 Citrullus lanatus HOM05D000375 ORTHO05D000240 1.8e-06 57.0 79 48.1
PSO210G2261 Papaver somniferum HOM05D000521 ORTHO05D000384 1.8e-06 57.0 73 42.5
Sabra14G0007600 Salix brachista HOM05D000375 ORTHO05D000240 1.8e-06 57.0 92 46.7
CARHR241060 Cardamine hirsuta HOM05D000521 ORTHO05D000384 2.3e-06 56.6 73 47.9
Dinv28002 Davidia involucrata HOM05D000521 ORTHO05D000384 2.3e-06 56.6 53 49.1
Aa31LG5G9600 Aethionema arabicum HOM05D000521 ORTHO05D000384 3.0e-06 56.2 74 44.6
CiPaw.16G027500 Carya illinoinensis HOM05D000521 ORTHO05D000384 3.0e-06 56.2 71 52.1
AL4G18660 Arabidopsis lyrata HOM05D000521 ORTHO05D000384 3.9e-06 55.8 76 46.1
BcaC09g52103 Brassica carinata HOM05D000521 ORTHO05D000384 3.9e-06 55.8 74 44.6
A08p17790 Brassica napus HOM05D000521 ORTHO05D000384 3.9e-06 55.8 74 43.2
BolC1t00542H Brassica oleracea HOM05D000521 ORTHO05D000384 3.9e-06 55.8 74 44.6
BraA08t33730Z Brassica rapa HOM05D000521 ORTHO05D000384 3.9e-06 55.8 74 43.2
Dinv26958 Davidia involucrata HOM05D000375 ORTHO05D000240 3.9e-06 55.8 74 48.6
Hma1.2p1_1139F.1_g260860 Hydrangea macrophylla HOM05D000375 ORTHO05D000240 3.9e-06 55.8 74 47.3
PSO210G1821 Papaver somniferum HOM05D000521 ORTHO05D000384 3.9e-06 55.8 76 40.8
Sabra14G0006600 Salix brachista HOM05D000375 ORTHO05D000240 3.9e-06 55.8 81 44.4
THA.LOC104819894 Tarenaya hassleriana HOM05D000521 ORTHO05D000384 3.9e-06 55.8 53 56.6
Prupe.6G217000 Prunus persica HOM05D000375 ORTHO05D000240 5.1e-06 55.5 109 36.7
MD15G1065000 Malus domestica HOM05D000375 ORTHO05D000240 6.7e-06 55.1 79 49.4
Sp4g06290 Schrenkiella parvula HOM05D000521 ORTHO05D000384 6.7e-06 55.1 79 43.0
Carub.0004s0604 Capsella rubella HOM05D000521 ORTHO05D000384 8.8e-06 54.7 42 64.3


User provided reference genes

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