Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_23760 Corylus avellana HOM05D007330 ORTHO05D009368 7.5e-130 467.2 243 100.0
CiPaw.13G117900 Carya illinoinensis HOM05D007330 ORTHO05D009368 5.2e-30 135.6 169 49.7
Sabra09G0004900 Salix brachista HOM05D007330 ORTHO05D009368 4.8e-28 129.0 222 41.0
Thecc.09G347600 Theobroma cacao HOM05D007330 ORTHO05D009368 7.7e-26 121.7 169 46.2
Ciclev10029423m.g Citrus clementina HOM05D007330 ORTHO05D009368 1.9e-24 117.1 156 48.1
Lj1C194T4 Lonicera japonica HOM05D007330 ORTHO05D009368 1.9e-24 117.1 166 45.8
Potri.009G008400 Populus trichocarpa HOM05D007330 ORTHO05D009368 2.5e-24 116.7 162 46.3
Manes.11G150100 Manihot esculenta HOM05D007330 ORTHO05D009368 9.5e-24 114.8 174 44.3
CSS0040476 Camellia sinensis var. sinensis HOM05D007330 ORTHO05D009368 2.8e-23 113.2 174 44.8
MBI18_g25263_MAGBIO Magnolia biondii HOM05D007330 ORTHO05D009368 2.8e-23 113.2 180 45.6
Cpa.g.sc65.31 Carica papaya HOM05D007330 ORTHO05D009368 6.1e-23 112.1 213 39.9
Dinv34698 Davidia involucrata HOM05D007330 ORTHO05D009368 8.0e-23 111.7 180 44.4
Aqoxy2G01788 Aquilegia oxysepala HOM05D007330 ORTHO05D009368 1.0e-22 111.3 182 40.7
TAR636G1893 Trochodendron aralioides HOM05D007330 ORTHO05D009368 1.4e-22 110.9 161 46.6
Nn2g13766 Nelumbo nucifera HOM05D007330 ORTHO05D009368 2.3e-22 110.2 153 46.4
RcHm_v2.0_Chr5g0057841 Rosa chinensis HOM05D007330 ORTHO05D009368 3.0e-22 109.8 156 44.9
Gohir.D05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 6.8e-22 108.6 157 45.9
FvH4_3g31190 Fragaria vesca HOM05D007330 ORTHO05D009368 1.2e-21 107.8 177 41.2
FAN11G3216 Fragaria x ananassa HOM05D007330 ORTHO05D009368 1.2e-21 107.8 177 41.2
Gohir.A05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 1.2e-21 107.8 157 45.2
Gorai.009G110400 Gossypium raimondii HOM05D007330 ORTHO05D009368 1.2e-21 107.8 157 45.2
Lalb_Chr19g0137021 Lupinus albus HOM05D007330 ORTHO05D009368 1.2e-21 107.8 153 44.4
FAN21G2017 Fragaria x ananassa HOM05D007330 ORTHO05D009368 2.0e-21 107.1 182 40.1
Prupe.6G107600 Prunus persica HOM05D007330 ORTHO05D009368 2.0e-21 107.1 156 44.9
Atru.chr3.3558 Acer truncatum HOM05D007330 ORTHO05D009368 2.6e-21 106.7 180 41.1
CANSAT35G1795 Cannabis sativa HOM05D007330 ORTHO05D009368 3.4e-21 106.3 177 41.8
QL01p015978 Quercus lobata HOM05D007330 ORTHO05D009368 3.4e-21 106.3 159 45.3
COL.COLO4_34706 Corchorus olitorius HOM05D007330 ORTHO05D009368 4.4e-21 105.9 158 44.9
FAN25G0306 Fragaria x ananassa HOM05D007330 ORTHO05D009368 4.4e-21 105.9 177 40.7
THA.LOC104814822 Tarenaya hassleriana HOM05D007330 ORTHO05D009368 5.7e-21 105.5 152 43.4
ClCG03G002650 Citrullus lanatus HOM05D007330 ORTHO05D009368 1.7e-20 104.0 199 40.2
PGSC0003DMG400005973 Solanum tuberosum HOM05D007330 ORTHO05D009368 1.7e-20 104.0 202 37.1
TWI31G1101 Tripterygium wilfordii HOM05D007330 ORTHO05D009368 2.8e-20 103.2 169 43.8
CsaV3_1G013380 Cucumis sativus L. HOM05D007330 ORTHO05D009368 3.7e-20 102.8 199 40.2
PGR119G1592 Punica granatum HOM05D007330 ORTHO05D009368 3.7e-20 102.8 170 40.0
MELO3C004968.2 Cucumis melo HOM05D007330 ORTHO05D009368 4.9e-20 102.4 199 40.2
Ca_19301_v3 Cicer arietinum L. HOM05D007330 ORTHO05D009368 1.4e-19 100.9 159 42.1
vmacro03274 Vaccinium macrocarpon HOM05D007330 ORTHO05D009368 1.4e-19 100.9 153 43.8
Migut.N02576 Erythranthe guttata HOM05D007330 ORTHO05D009368 2.4e-19 100.1 180 37.8
Lj3g0015691 Lotus japonicus HOM05D007330 ORTHO05D009368 3.2e-19 99.8 150 42.7
Rhsim13G0098500 Rhododendron simsii HOM05D007330 ORTHO05D009368 4.1e-19 99.4 153 42.5
Sed0025524 Sechium edule HOM05D007330 ORTHO05D009368 4.1e-19 99.4 198 39.4
Cc01_g10610 Coffea canephora HOM05D007330 ORTHO05D009368 5.4e-19 99.0 146 44.5
MSTRG.18683 Avicennia marina HOM05D007330 ORTHO05D009368 7.0e-19 98.6 147 42.9
Psat4g155560 Pisum sativum HOM05D007330 ORTHO05D009368 1.6e-18 97.4 155 41.9
Glyma.11G195100 Glycine max HOM05D007330 ORTHO05D009368 2.0e-18 97.1 155 40.6
Nitab4.5_0000567g0040 Nicotiana tabacum HOM05D007330 ORTHO05D009368 2.7e-18 96.7 153 40.5
arahy.Tifrunner.gnm1.ann1.N36MJA Arachis hypogaea HOM05D007330 ORTHO05D009368 3.5e-18 96.3 112 50.0
BcaC09g49699 Brassica carinata HOM05D007330 ORTHO05D009368 4.5e-18 95.9 151 45.7
A01p26570 Brassica napus HOM05D007330 ORTHO05D009368 4.5e-18 95.9 151 45.7
C01p33810 Brassica napus HOM05D007330 ORTHO05D009368 4.5e-18 95.9 151 45.7
BolC1t03342H Brassica oleracea HOM05D007330 ORTHO05D009368 4.5e-18 95.9 151 45.7
BraA01t02587Z Brassica rapa HOM05D007330 ORTHO05D009368 4.5e-18 95.9 151 45.7
Eucgr.J00897 Eucalyptus grandis HOM05D007330 ORTHO05D009368 4.5e-18 95.9 190 36.3
Medtr4g057845 Medicago truncatula HOM05D007330 ORTHO05D009368 4.5e-18 95.9 160 40.0
Nitab4.5_0003325g0010 Nicotiana tabacum HOM05D007330 ORTHO05D009368 4.5e-18 95.9 153 40.5
Ah.01g003130 Amaranthus hybridus HOM05D007330 ORTHO05D009368 1.0e-17 94.7 153 43.8
CAN.G1577.6 Capsicum annuum HOM05D007330 ORTHO05D009368 1.0e-17 94.7 156 39.7
Lsat_1_v5_gn_1_63180 Lactuca sativa HOM05D007330 ORTHO05D009368 1.0e-17 94.7 146 43.2
Glyma.12G079000 Glycine max HOM05D007330 ORTHO05D009368 1.3e-17 94.4 153 40.5
arahy.Tifrunner.gnm1.ann1.PP0PHB Arachis hypogaea HOM05D007330 ORTHO05D009368 3.9e-17 92.8 156 39.7
Hma1.2p1_0569F.1_g180250 Hydrangea macrophylla HOM05D007330 ORTHO05D009368 3.9e-17 92.8 153 41.2
BcaB05g23421 Brassica carinata HOM05D007330 ORTHO05D009368 5.0e-17 92.4 151 43.7
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 5.0e-17 92.4 151 39.7
ECA248G2053 Erigeron canadensis HOM05D007330 ORTHO05D009368 5.0e-17 92.4 146 41.1
CARHR150920 Cardamine hirsuta HOM05D007330 ORTHO05D009368 6.6e-17 92.0 152 39.5
HanXRQChr11g0346411 Helianthus annuus HOM05D007330 ORTHO05D009368 8.6e-17 91.7 175 38.3
VMungo1127G0312 Vigna mungo HOM05D007330 ORTHO05D009368 8.6e-17 91.7 166 38.6
arahy.Tifrunner.gnm1.ann1.V5GM9G Arachis hypogaea HOM05D007330 ORTHO05D009368 1.1e-16 91.3 154 40.3
Thhalv10002688m.g Eutrema salsugineum HOM05D007330 ORTHO05D009368 2.5e-16 90.1 140 45.0
Sopen04g002470 Solanum pennellii HOM05D007330 ORTHO05D009368 2.5e-16 90.1 147 38.8
GSVIVG01031517001 Vitis vinifera HOM05D000070 ORTHO05D001255 2.5e-16 90.1 155 41.9
DCAR_018785 Daucus carota HOM05D007330 ORTHO05D009368 7.3e-16 88.6 153 39.9
MD11G1142300 Malus domestica HOM05D007330 ORTHO05D009368 9.5e-16 88.2 156 41.0
Solyc04g007410.4 Solanum lycopersicum HOM05D007330 ORTHO05D009368 1.6e-15 87.4 147 38.1
AT3G45050 Arabidopsis thaliana HOM05D007330 ORTHO05D009368 2.1e-15 87.0 153 39.9
Sp5g16210 Schrenkiella parvula HOM05D007330 ORTHO05D009368 2.8e-15 86.7 140 44.3
Carub.0005s1083 Capsella rubella HOM05D007330 ORTHO05D009368 6.1e-15 85.5 153 39.2
Aa31LG4G14100 Aethionema arabicum HOM05D007330 ORTHO05D009368 8.0e-15 85.1 159 37.7
PSO339G1528 Papaver somniferum HOM05D007330 ORTHO05D009368 4.0e-14 82.8 153 35.3
Sc15g0001620 Simmondsia chinensis HOM05D007330 ORTHO05D009368 1.5e-13 80.9 146 37.7
SGA_v2.0_scaffold116G32214 Striga asiatica HOM05D007330 ORTHO05D009368 2.0e-13 80.5 129 40.3
Peaxi162Scf00064g00193 Petunia axillaris HOM05D007330 ORTHO05D009368 3.4e-13 79.7 143 39.2
Hund08155 Selenicereus undatus HOM05D007330 ORTHO05D009368 3.4e-13 79.7 144 39.6
Peaxi162Scf00597g00033 Petunia axillaris HOM05D007330 ORTHO05D009368 5.8e-13 79.0 143 39.2
Actinidia07167 Actinidia chinensis HOM05D007330 ORTHO05D009368 9.8e-13 78.2 147 38.1
Peaxi162Scf00958g00023 Petunia axillaris HOM05D007330 ORTHO05D009368 1.3e-12 77.8 143 39.2
AUR62029217 Chenopodium quinoa HOM05D007330 ORTHO05D009368 3.7e-12 76.3 155 37.4
HPP92_007165 Vanilla planifolia HOM05D007330 ORTHO05D009368 6.4e-12 75.5 173 35.8
Lj1A195G28 Lonicera japonica HOM05D007330 ORTHO05D009368 3.2e-11 73.2 187 33.7
Phvul.011G083600 Phaseolus vulgaris HOM05D007330 ORTHO05D009368 5.4e-11 72.4 51 62.7
PSO801G0259 Papaver somniferum HOM05D007330 ORTHO05D009368 7.0e-11 72.0 48 62.5
SEGI_17989 Sequoiadendron giganteum HOM05D007330 ORTHO05D009368 2.0e-10 70.5 46 67.4
AL5G23540 Arabidopsis lyrata HOM05D007330 ORTHO05D009368 2.7e-10 70.1 47 68.1
AUR62022766 Chenopodium quinoa HOM05D007330 ORTHO05D009368 3.5e-10 69.7 153 37.9
Pp3c18_13360 Physcomitrium patens HOM05D007330 ORTHO05D009368 1.0e-09 68.2 46 63.0
CBR_g54316 Chara braunii HOM05D007330 ORTHO05D009368 1.3e-09 67.8 48 60.4
Os06g0731300 Oryza sativa ssp. japonica HOM05D007330 ORTHO05D009368 3.9e-09 66.2 46 56.5
AagrBONN_evm.TU.Sc2ySwM_228.4164 Anthoceros agrestis HOM05D007330 ORTHO05D009368 2.5e-08 63.5 47 53.2
FAN16G2470 Fragaria x ananassa HOM05D007330 ORTHO05D009368 6.2e-07 58.9 52 65.4


User provided reference genes

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