Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_23654 Corylus avellana HOM05D006039 ORTHO05D006797 1.1e-122 443.4 229 100.0
Haze_23073 Corylus avellana HOM05D006039 ORTHO05D006797 3.7e-110 401.7 231 91.8
Haze_23653 Corylus avellana HOM05D006039 ORTHO05D006797 5.5e-90 334.7 229 79.9
Haze_23701 Corylus avellana HOM05D006039 ORTHO05D006797 5.7e-87 324.7 231 77.9
CiPaw.14G122300 Carya illinoinensis HOM05D006039 ORTHO05D006797 1.4e-85 320.1 230 73.0
QL01p005703 Quercus lobata HOM05D006039 ORTHO05D006797 5.9e-76 288.1 229 68.6
Cfa009721 Carpinus fangiana HOM05D006039 ORTHO05D006797 1.8e-72 276.6 159 90.6
Haze_23655 Corylus avellana HOM05D006039 ORTHO05D006797 3.0e-72 275.8 231 70.6
Haze_23698 Corylus avellana HOM05D006039 ORTHO05D006797 1.2e-68 263.8 159 86.2
Potri.003G207400 Populus trichocarpa HOM05D006039 ORTHO05D006797 3.5e-68 262.3 223 62.8
Potri.001G017100 Populus trichocarpa HOM05D006039 ORTHO05D006797 1.7e-67 260.0 224 63.4
Prupe.6G022100 Prunus persica HOM05D006039 ORTHO05D006797 3.8e-67 258.8 229 64.2
Haze_23699 Corylus avellana HOM05D006039 ORTHO05D006797 5.0e-67 258.5 174 79.9
Dinv36292 Davidia involucrata HOM05D006039 ORTHO05D006797 9.4e-66 254.2 229 61.6
Thecc.09G226300 Theobroma cacao HOM05D006039 ORTHO05D006797 2.1e-65 253.1 221 63.8
Sabra01G0012000 Salix brachista HOM05D006039 ORTHO05D006797 5.2e-64 248.4 226 61.9
RcHm_v2.0_Chr5g0077351 Rosa chinensis HOM05D006039 ORTHO05D006797 3.4e-63 245.7 229 60.3
Duzib168G2100 Durio zibethinus HOM05D006039 ORTHO05D006797 2.8e-62 242.7 226 60.6
Haze_23656 Corylus avellana HOM05D006039 ORTHO05D006797 8.3e-62 241.1 193 74.6
FAN21G1726 Fragaria x ananassa HOM05D006039 ORTHO05D006797 1.4e-61 240.4 217 60.8
FAN25G3739 Fragaria x ananassa HOM05D006039 ORTHO05D006797 1.4e-61 240.4 217 60.8
Eucgr.B03667 Eucalyptus grandis HOM05D006039 ORTHO05D006797 4.1e-61 238.8 217 59.0
FvH4_3g43290 Fragaria vesca HOM05D006039 ORTHO05D006797 7.0e-61 238.0 217 60.4
CsaV3_4G024070 Cucumis sativus L. HOM05D006039 ORTHO05D006797 1.6e-60 236.9 232 57.3
FAN11G0272 Fragaria x ananassa HOM05D006039 ORTHO05D006797 2.7e-60 236.1 217 59.9
MD11G1028000 Malus domestica HOM05D006039 ORTHO05D006797 4.5e-60 235.3 220 59.1
Manes.06G167800 Manihot esculenta HOM05D006039 ORTHO05D006797 5.9e-60 235.0 229 56.8
Atru.chr3.2554 Acer truncatum HOM05D006039 ORTHO05D006797 1.7e-59 233.4 226 59.7
CANSAT54G2219 Cannabis sativa HOM05D006039 ORTHO05D006797 1.7e-59 233.4 212 61.8
Cpa.g.sc84.90 Carica papaya HOM05D006039 ORTHO05D006797 3.8e-59 232.3 215 60.9
MELO3C014616.2 Cucumis melo HOM05D006039 ORTHO05D006797 1.9e-58 229.9 222 58.1
Lalb_Chr22g0352291 Lupinus albus HOM05D006039 ORTHO05D006797 3.6e-57 225.7 209 59.8
CSS0020882 Camellia sinensis var. sinensis HOM05D006039 ORTHO05D006797 4.7e-57 225.3 228 58.8
CSS0048119 Camellia sinensis var. sinensis HOM05D006039 ORTHO05D006797 4.7e-57 225.3 228 58.8
ClCG02G023440 Citrullus lanatus HOM05D006039 ORTHO05D006797 4.7e-57 225.3 223 57.0
Glyma.15G032500 Glycine max HOM05D006039 ORTHO05D006797 6.1e-57 224.9 206 62.1
Lj3g0020392 Lotus japonicus HOM05D006039 ORTHO05D006797 8.0e-57 224.6 220 57.7
FAN16G1487 Fragaria x ananassa HOM05D006039 ORTHO05D006797 1.8e-56 223.4 217 58.5
Manes.14G013400 Manihot esculenta HOM05D006039 ORTHO05D006797 2.3e-56 223.0 225 54.2
Sed0010144 Sechium edule HOM05D006039 ORTHO05D006797 6.8e-56 221.5 223 55.2
Ca_01279_v3 Cicer arietinum L. HOM05D006039 ORTHO05D006797 1.2e-55 220.7 224 54.9
TWI32G0154 Tripterygium wilfordii HOM05D006039 ORTHO05D006797 1.2e-55 220.7 233 55.4
Medtr2g098330 Medicago truncatula HOM05D006039 ORTHO05D006797 1.3e-54 217.2 208 60.1
COL.COLO4_24829 Corchorus olitorius HOM05D006039 ORTHO05D006797 4.8e-54 215.3 220 56.4
Glyma.13G341800 Glycine max HOM05D006039 ORTHO05D006797 6.3e-54 214.9 213 58.2
Ciclev10014934m.g Citrus clementina HOM05D006039 ORTHO05D006797 4.1e-53 212.2 249 51.4
arahy.Tifrunner.gnm1.ann1.CQR7QS Arachis hypogaea HOM05D006039 ORTHO05D006797 2.7e-52 209.5 237 53.6
Gohir.A13G216000 Gossypium hirsutum HOM05D006039 ORTHO05D006797 1.3e-51 207.2 216 57.4
Cfa009719 Carpinus fangiana HOM05D006039 ORTHO05D006797 3.8e-51 205.7 142 83.1
Phvul.L011043 Phaseolus vulgaris HOM05D006039 ORTHO05D006797 5.0e-51 205.3 204 58.3
VMungo1080G1590 Vigna mungo HOM05D006039 ORTHO05D006797 5.0e-51 205.3 193 59.6
Lalb_Chr24g0396971 Lupinus albus HOM05D006039 ORTHO05D006797 1.9e-50 203.4 231 51.1
TAR623G0385 Trochodendron aralioides HOM05D006039 ORTHO05D006797 4.2e-50 202.2 206 55.8
Psat5g288280 Pisum sativum HOM05D006039 ORTHO05D006797 5.5e-50 201.8 254 49.2
Rhsim01G0190000 Rhododendron simsii HOM05D006039 ORTHO05D006797 5.5e-50 201.8 231 52.8
Duzib150G0354 Durio zibethinus HOM05D006039 ORTHO05D006797 7.2e-50 201.4 220 54.1
PGR102G2927 Punica granatum HOM05D006039 ORTHO05D006797 9.5e-50 201.1 219 55.3
GSVIVG01025314001 Vitis vinifera HOM05D006039 ORTHO05D006797 1.6e-49 200.3 228 53.9
Cc01_g04400 Coffea canephora HOM05D006039 ORTHO05D006797 2.8e-49 199.5 202 57.4
TPR.G6898 Trifolium pratense HOM05D006039 ORTHO05D006797 2.8e-49 199.5 261 48.7
MSTRG.17577 Avicennia marina HOM05D006039 ORTHO05D006797 4.7e-49 198.7 208 53.8
Lj1C361T2 Lonicera japonica HOM05D006039 ORTHO05D006797 1.0e-48 197.6 216 56.0
Aqoxy3G00443 Aquilegia oxysepala HOM05D006039 ORTHO05D006797 1.8e-48 196.8 188 59.0
Gohir.D13G219700 Gossypium hirsutum HOM05D006039 ORTHO05D006797 3.0e-48 196.1 216 56.0
THA.LOC104804971 Tarenaya hassleriana HOM05D006039 ORTHO05D006797 2.6e-47 193.0 223 51.1
vmacro12713 Vaccinium macrocarpon HOM05D006039 ORTHO05D006797 3.4e-47 192.6 184 63.0
EL10Ac4g10308 Beta vulgaris HOM05D006039 ORTHO05D006797 2.8e-46 189.5 231 50.6
THA.LOC104799094 Tarenaya hassleriana HOM05D006039 ORTHO05D006797 6.3e-46 188.3 226 48.2
Nitab4.5_0000175g0040 Nicotiana tabacum HOM05D006039 ORTHO05D006797 8.3e-46 188.0 206 53.4
Ah.06g193560 Amaranthus hybridus HOM05D006039 ORTHO05D006797 1.4e-45 187.2 203 52.7
Nitab4.5_0002278g0050 Nicotiana tabacum HOM05D006039 ORTHO05D006797 2.4e-45 186.4 206 53.4
Potri.003G207500 Populus trichocarpa HOM05D006039 ORTHO05D006797 5.4e-45 185.3 219 52.1
Actinidia06328 Actinidia chinensis HOM05D006039 ORTHO05D006797 7.0e-45 184.9 226 52.2
Nn2g15509 Nelumbo nucifera HOM05D006039 ORTHO05D006797 7.0e-45 184.9 192 53.1
AUR62019256 Chenopodium quinoa HOM05D006039 ORTHO05D006797 9.2e-45 184.5 229 48.9
AUR62005725 Chenopodium quinoa HOM05D006039 ORTHO05D006797 1.2e-44 184.1 203 52.2
Oeu014066.1 Olea europaea HOM05D006039 ORTHO05D006797 4.5e-44 182.2 209 54.1
Sc16g0011650 Simmondsia chinensis HOM05D006039 ORTHO05D006797 4.5e-44 182.2 242 49.6
Solyc11g056640.3 Solanum lycopersicum HOM05D006039 ORTHO05D006797 1.7e-43 180.3 198 53.5
Lsat_1_v5_gn_1_67181 Lactuca sativa HOM05D006039 ORTHO05D006797 2.5e-42 176.4 188 53.7
SalBow4G0075 Salvia bowleyana HOM05D006039 ORTHO05D006797 4.7e-41 172.2 217 48.8
SalBow4G2759 Salvia bowleyana HOM05D006039 ORTHO05D006797 4.7e-41 172.2 217 48.8
MBI01_g36435_MAGBIO Magnolia biondii HOM05D006039 ORTHO05D006797 1.4e-40 170.6 163 62.0
PSO339G2813 Papaver somniferum HOM05D006039 ORTHO05D006797 1.8e-40 170.2 218 48.2
Migut.D00567 Erythranthe guttata HOM05D006039 ORTHO05D006797 2.3e-40 169.9 208 50.0
PSO384G3161 Papaver somniferum HOM05D006039 ORTHO05D006797 4.0e-40 169.1 217 48.8
AUR62043683 Chenopodium quinoa HOM05D006039 ORTHO05D006797 5.2e-40 168.7 229 46.7
Peaxi162Scf00839g00234 Petunia axillaris HOM05D006039 ORTHO05D006797 6.8e-40 168.3 169 59.2
MSTRG.12478 Avicennia marina HOM05D006039 ORTHO05D006797 3.4e-39 166.0 203 47.8
ECA233G1597 Erigeron canadensis HOM05D006039 ORTHO05D006797 1.7e-38 163.7 193 52.8
CARHR200520 Cardamine hirsuta HOM05D006039 ORTHO05D006797 2.4e-37 159.8 226 42.5
Sabra03G0153000 Salix brachista HOM05D006039 ORTHO05D006797 2.4e-37 159.8 219 48.4
Nn7g36093 Nelumbo nucifera HOM05D006039 ORTHO05D006797 7.0e-37 158.3 215 46.5
AL6G23500 Arabidopsis lyrata HOM05D006039 ORTHO05D006797 1.3e-35 154.1 225 40.9
arahy.Tifrunner.gnm1.ann1.IJ2E5N Arachis hypogaea HOM05D006039 ORTHO05D006797 1.7e-35 153.7 237 42.6
Migut.N02301 Erythranthe guttata HOM05D006039 ORTHO05D006797 1.7e-35 153.7 208 48.1
Sp6g31030 Schrenkiella parvula HOM05D006039 ORTHO05D006797 2.3e-35 153.3 222 41.9
AT5G12930 Arabidopsis thaliana HOM05D006039 ORTHO05D006797 3.0e-35 152.9 218 43.6
Thhalv10013519m.g Eutrema salsugineum HOM05D006039 ORTHO05D006797 3.0e-35 152.9 217 41.0
Carub.0006s1111 Capsella rubella HOM05D006039 ORTHO05D006797 6.6e-35 151.8 232 43.5
A02p01580 Brassica napus HOM05D006039 ORTHO05D006797 1.9e-34 150.2 235 39.6
SGA_v2.0_scaffold247G44833 Striga asiatica HOM05D006039 ORTHO05D006797 1.9e-34 150.2 238 43.7
BraA02t05138Z Brassica rapa HOM05D006039 ORTHO05D006797 1.6e-33 147.1 236 39.4
Aa31LG3G14700 Aethionema arabicum HOM05D006389 ORTHO05D007863 3.6e-33 146.0 226 39.8
CDE06G0903 Ceratophyllum demersum HOM05D000288 ORTHO05D000173 3.6e-33 146.0 177 49.7
HanXRQChr13g0403991 Helianthus annuus HOM05D006039 ORTHO05D006797 6.2e-33 145.2 195 47.7
BcaNung03603 Brassica carinata HOM05D006039 ORTHO05D006797 2.0e-31 140.2 222 39.6
DCAR_002046 Daucus carota HOM05D006039 ORTHO05D006797 2.0e-31 140.2 215 42.8
BcaB01g05390 Brassica carinata HOM05D006389 ORTHO05D007863 8.3e-30 134.8 220 40.0
A03p05700 Brassica napus HOM05D006039 ORTHO05D006797 1.1e-29 134.4 225 37.3
BraA03t09909Z Brassica rapa HOM05D006039 ORTHO05D006797 1.1e-29 134.4 225 37.3
Hund07543 Selenicereus undatus HOM05D006039 ORTHO05D006797 1.4e-29 134.0 126 52.4
TAR636G1066 Trochodendron aralioides HOM05D004785 ORTHO05D005704 2.1e-28 130.2 216 42.1
BolC3t13172H Brassica oleracea HOM05D006039 ORTHO05D006797 3.9e-27 125.9 220 37.7
C03p06660 Brassica napus HOM05D006039 ORTHO05D006797 5.1e-27 125.6 220 39.1
HPP92_015767 Vanilla planifolia HOM05D006039 ORTHO05D006797 1.9e-26 123.6 180 48.3
AUR62043578 Chenopodium quinoa HOM05D006039 ORTHO05D006797 4.7e-25 119.0 124 50.0
C02p05800 Brassica napus HOM05D006039 ORTHO05D006797 6.2e-25 118.6 160 46.2
BcaNung01186 Brassica carinata HOM05D006039 ORTHO05D006797 6.8e-24 115.2 160 45.6
BolC2t06525H Brassica oleracea HOM05D006039 ORTHO05D006797 6.8e-24 115.2 160 45.6
ATR0815G050 Amborella trichopoda HOM05D006039 ORTHO05D006797 3.4e-23 112.8 153 51.0
Os09g0488600 Oryza sativa ssp. japonica HOM05D006039 ORTHO05D006797 1.7e-22 110.5 148 48.0
BcaB01g05389 Brassica carinata HOM05D006039 ORTHO05D006797 1.1e-21 107.8 220 35.9
Actinidia39388 Actinidia chinensis HOM05D006039 ORTHO05D006797 2.8e-17 93.2 90 57.8
SHI30498 Sapria himalayana HOM05D006039 ORTHO05D000001 4.7e-17 92.4 232 31.0
Hund07487 Selenicereus undatus HOM05D000288 ORTHO05D006797 1.5e-15 87.4 94 60.6
Hund07491 Selenicereus undatus HOM05D006039 ORTHO05D006797 4.4e-15 85.9 94 59.6
Zm00001eb101890 Zea mays HOM05D006039 ORTHO05D006797 4.9e-14 82.4 98 48.0
Lsat_1_v5_gn_1_67161 Lactuca sativa HOM05D006039 ORTHO05D006797 2.1e-12 77.0 86 55.8
CiPaw.14G124400 Carya illinoinensis HOM05D000009 ORTHO05D000008 1.2e-07 61.2 65 52.3
AUR62014261 Chenopodium quinoa HOM05D006039 ORTHO05D006797 2.0e-07 60.5 75 42.7
SEGI_29391 Sequoiadendron giganteum HOM05D022188 ORTHO05D006797 8.4e-06 55.1 150 31.3


User provided reference genes

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