Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_23636 Corylus avellana HOM05D007263 ORTHO05D009187 3.7e-128 461.8 284 100.0
Cfa010246 Carpinus fangiana HOM05D007263 ORTHO05D009187 4.9e-64 248.8 214 67.3
CiPaw.13G127300 Carya illinoinensis HOM05D007263 ORTHO05D009187 1.2e-49 201.1 214 55.1
Manes.09G111800 Manihot esculenta HOM05D007263 ORTHO05D009187 1.3e-45 187.6 214 53.3
Actinidia06355 Actinidia chinensis HOM05D007263 ORTHO05D009187 5.1e-45 185.7 216 53.2
TWI79G1263 Tripterygium wilfordii HOM05D007263 ORTHO05D009187 2.8e-43 179.9 219 50.7
Sabra09G0122700 Salix brachista HOM05D007263 ORTHO05D009187 3.7e-43 179.5 213 51.6
Thecc.09G263800 Theobroma cacao HOM05D007263 ORTHO05D009187 8.1e-43 178.3 205 51.2
FvH4_3g27180 Fragaria vesca HOM05D007263 ORTHO05D009187 1.8e-42 177.2 208 51.4
Gohir.A05G075400 Gossypium hirsutum HOM05D007263 ORTHO05D009187 1.8e-42 177.2 214 50.5
Dinv32124 Davidia involucrata HOM05D007263 ORTHO05D009187 3.1e-42 176.4 209 51.2
FAN16G1710 Fragaria x ananassa HOM05D007263 ORTHO05D009187 3.1e-42 176.4 208 51.0
Gohir.D05G078200 Gossypium hirsutum HOM05D007263 ORTHO05D009187 9.0e-42 174.9 260 43.5
Gorai.009G079700 Gossypium raimondii HOM05D007263 ORTHO05D009187 9.0e-42 174.9 260 43.5
FAN11G0122 Fragaria x ananassa HOM05D007263 ORTHO05D009187 1.5e-41 174.1 214 50.0
RcHm_v2.0_Chr5g0049851 Rosa chinensis HOM05D007263 ORTHO05D009187 4.5e-41 172.6 209 49.8
Atru.chr3.2913 Acer truncatum HOM05D007263 ORTHO05D009187 1.3e-40 171.0 211 50.2
Duzib168G0238 Durio zibethinus HOM05D007263 ORTHO05D009187 2.2e-40 170.2 218 50.0
QL01p020523 Quercus lobata HOM05D007263 ORTHO05D009187 2.9e-40 169.9 156 59.6
Eucgr.J00617 Eucalyptus grandis HOM05D007263 ORTHO05D009187 3.8e-40 169.5 232 46.6
Glyma.20G058100 Glycine max HOM05D007263 ORTHO05D009187 6.5e-40 168.7 212 48.6
Ciclev10016536m.g Citrus clementina HOM05D007263 ORTHO05D009187 8.4e-40 168.3 224 49.1
TAR623G1137 Trochodendron aralioides HOM05D007263 ORTHO05D009187 1.4e-39 167.5 213 48.4
Lj6g0015831 Lotus japonicus HOM05D007263 ORTHO05D009187 3.2e-39 166.4 215 50.2
VMungo0540G1942 Vigna mungo HOM05D007263 ORTHO05D009187 3.2e-39 166.4 222 47.3
Nn6g32384 Nelumbo nucifera HOM05D007263 ORTHO05D009187 4.2e-39 166.0 213 47.9
Phvul.L004437 Phaseolus vulgaris HOM05D007263 ORTHO05D009187 4.2e-39 166.0 218 48.2
Ca_16255_v3 Cicer arietinum L. HOM05D007263 ORTHO05D009187 7.1e-39 165.2 208 47.1
MD11G1181300 Malus domestica HOM05D007263 ORTHO05D009187 2.7e-38 163.3 209 48.8
Prupe.6G154100 Prunus persica HOM05D007263 ORTHO05D009187 7.9e-38 161.8 211 48.8
FAN25G1860 Fragaria x ananassa HOM05D007263 ORTHO05D009187 6.7e-37 158.7 230 44.3
GSVIVG01037444001 Vitis vinifera HOM05D000101 ORTHO05D000089 6.7e-37 158.7 212 46.7
COL.COLO4_25292 Corchorus olitorius HOM05D007263 ORTHO05D009187 1.5e-36 157.5 211 48.8
MBI19_g09308_MAGBIO Magnolia biondii HOM05D007263 ORTHO05D009187 2.5e-36 156.8 213 46.0
Medtr3g079520 Medicago truncatula HOM05D007263 ORTHO05D009187 7.4e-36 155.2 207 47.8
Medtr3g479600 Medicago truncatula HOM05D007263 ORTHO05D009187 7.4e-36 155.2 207 47.8
CANSAT54G3001 Cannabis sativa HOM05D007263 ORTHO05D009187 9.6e-36 154.8 210 44.8
Hma1.2p1_0994F.1_g245580 Hydrangea macrophylla HOM05D007263 ORTHO05D009187 1.3e-35 154.5 197 48.2
Potri.009G156700 Populus trichocarpa HOM05D007263 ORTHO05D009187 1.6e-35 154.1 156 56.4
Rhsim01G0197200 Rhododendron simsii HOM05D007263 ORTHO05D009187 3.7e-35 152.9 206 48.1
PSO339G3146 Papaver somniferum HOM05D007263 ORTHO05D009187 8.2e-35 151.8 201 47.8
PSO384G0367 Papaver somniferum HOM05D007263 ORTHO05D009187 8.2e-35 151.8 201 47.8
CSS0014161 Camellia sinensis var. sinensis HOM05D007263 ORTHO05D009187 2.0e-33 147.1 180 47.8
PGR119G0910 Punica granatum HOM05D007263 ORTHO05D009187 2.6e-33 146.7 193 47.2
ECA240G3643 Erigeron canadensis HOM05D000684 ORTHO05D000688 1.7e-32 144.1 197 47.2
TPR.G9589 Trifolium pratense HOM05D007263 ORTHO05D009187 2.2e-32 143.7 164 50.0
HanXRQChr03g0085111 Helianthus annuus HOM05D007263 ORTHO05D009187 3.8e-32 142.9 192 46.4
Lsat_1_v5_gn_6_85860 Lactuca sativa HOM05D007263 ORTHO05D009187 5.0e-32 142.5 211 45.0
Sc06g0006180 Simmondsia chinensis HOM05D007263 ORTHO05D009187 5.0e-32 142.5 225 44.0
MSTRG.17655 Avicennia marina HOM05D007263 ORTHO05D009187 1.4e-31 141.0 203 43.8
CDE07G0519 Ceratophyllum demersum HOM05D007263 ORTHO05D009187 5.5e-31 139.0 211 41.7
Psat5g112360 Pisum sativum HOM05D007263 ORTHO05D009187 7.2e-31 138.7 150 52.0
AUR62001600 Chenopodium quinoa HOM05D007263 ORTHO05D009187 2.7e-30 136.7 246 39.4
DCAR_028386 Daucus carota HOM05D007263 ORTHO05D009187 2.7e-30 136.7 231 42.0
Oeu032066.1 Olea europaea HOM05D007263 ORTHO05D009187 2.7e-30 136.7 197 46.7
ATR0068G111 Amborella trichopoda HOM05D007263 ORTHO05D009187 1.8e-29 134.0 172 45.9
EL10Ac7g16235 Beta vulgaris HOM05D007263 ORTHO05D009187 3.0e-29 133.3 204 45.6
Hund18825 Selenicereus undatus HOM05D007263 ORTHO05D009187 3.9e-29 132.9 190 46.3
CSS0024406 Camellia sinensis var. sinensis HOM05D007263 ORTHO05D009187 5.1e-29 132.5 152 48.0
ClCG02G024290 Citrullus lanatus HOM05D007263 ORTHO05D009187 5.1e-29 132.5 178 46.6
Cc01_g07450 Coffea canephora HOM05D007263 ORTHO05D009187 6.7e-29 132.1 194 41.8
vmacro23061 Vaccinium macrocarpon HOM05D007263 ORTHO05D009187 2.5e-28 130.2 161 49.1
Sed0004996 Sechium edule HOM05D007263 ORTHO05D009187 4.3e-28 129.4 181 45.3
THA.LOC104816966 Tarenaya hassleriana HOM05D007263 ORTHO05D009187 4.3e-28 129.4 189 41.8
Lalb_Chr14g0363361 Lupinus albus HOM05D007263 ORTHO05D009187 7.4e-28 128.6 181 44.2
AUR62020179 Chenopodium quinoa HOM05D007263 ORTHO05D009187 1.6e-27 127.5 198 42.4
AL4G10720 Arabidopsis lyrata HOM05D007263 ORTHO05D009187 2.2e-27 127.1 198 39.9
Carub.0004s0057 Capsella rubella HOM05D007263 ORTHO05D009187 3.1e-26 123.2 202 38.1
AT2G21530 Arabidopsis thaliana HOM05D007263 ORTHO05D009187 1.2e-25 121.3 202 38.6
SalBow3G2238 Salvia bowleyana HOM05D007263 ORTHO05D009187 1.5e-25 120.9 189 43.4
Sp4g00690 Schrenkiella parvula HOM05D007263 ORTHO05D009187 2.6e-25 120.2 188 41.0
CARHR112460 Cardamine hirsuta HOM05D007263 ORTHO05D009187 5.9e-25 119.0 189 40.2
Thhalv10000320m.g Eutrema salsugineum HOM05D007263 ORTHO05D009187 7.7e-25 118.6 200 38.5
SGA_v2.0_scaffold29G12128 Striga asiatica HOM05D000563 ORTHO05D000536 1.7e-24 117.5 204 38.2
unitig_8.g2984 Utricularia gibba HOM05D007263 ORTHO05D009187 2.9e-24 116.7 192 39.6
SGA_v2.0_scaffold16G07576 Striga asiatica HOM05D007263 ORTHO05D009187 8.5e-24 115.2 197 41.1
SGA_v2.0_scaffold3G01630 Striga asiatica HOM05D007263 ORTHO05D009187 8.5e-24 115.2 197 41.1
BcaC07g41154 Brassica carinata HOM05D007263 ORTHO05D009187 1.9e-23 114.0 184 38.6
BolC8t51703H Brassica oleracea HOM05D007263 ORTHO05D009187 1.9e-23 114.0 184 38.6
Migut.N02412 Erythranthe guttata HOM05D007263 ORTHO05D009187 1.9e-23 114.0 139 46.8
BraA09t41205Z Brassica rapa HOM05D007263 ORTHO05D009187 3.2e-23 113.2 204 38.2
A09p58160 Brassica napus HOM05D007263 ORTHO05D009187 4.2e-23 112.8 204 38.2
MELO3C014714.2 Cucumis melo HOM05D007263 ORTHO05D009187 5.5e-23 112.5 126 49.2
Os11g0127800 Oryza sativa ssp. japonica HOM05D007263 ORTHO05D009187 5.5e-23 112.5 193 39.4
Zm00001eb163720 Zea mays HOM05D007263 ORTHO05D009187 5.5e-23 112.5 183 41.0
Aa31LG7G14990 Aethionema arabicum HOM05D007263 ORTHO05D009187 1.2e-22 111.3 174 40.2
SGA_v2.0_scaffold8G04511 Striga asiatica HOM05D000563 ORTHO05D000536 1.5e-20 104.4 208 37.5
CAN.G651.2 Capsicum annuum HOM05D007263 ORTHO05D009187 4.3e-20 102.8 203 36.5
SMO271G0152 Selaginella moellendorffii HOM05D007263 ORTHO05D009187 4.3e-20 102.8 183 36.6
Solyc01g009080.4 Solanum lycopersicum HOM05D007263 ORTHO05D009187 4.3e-20 102.8 192 38.5
PGSC0003DMG400022700 Solanum tuberosum HOM05D007263 ORTHO05D009187 4.3e-20 102.8 192 38.5
Pp3c1_27160 Physcomitrium patens HOM05D007263 ORTHO05D009187 5.7e-20 102.4 181 37.0
Potri.009G156900 Populus trichocarpa HOM05D007263 ORTHO05D009187 5.7e-20 102.4 215 37.7
Sopen01g004570 Solanum pennellii HOM05D007263 ORTHO05D009187 1.3e-19 101.3 192 38.0
Cpa.g.sc103.87 Carica papaya HOM05D007263 ORTHO05D009187 1.7e-19 100.9 247 34.8
arahy.Tifrunner.gnm1.ann1.TU72Q6 Arachis hypogaea HOM05D007263 ORTHO05D009187 3.7e-19 99.8 195 35.9
arahy.Tifrunner.gnm1.ann1.S2FUN4 Arachis hypogaea HOM05D007263 ORTHO05D009187 2.4e-18 97.1 186 36.0
Nitab4.5_0000428g0130 Nicotiana tabacum HOM05D007263 ORTHO05D009187 4.1e-18 96.3 208 37.5
CsaV3_4G017420 Cucumis sativus L. HOM05D007263 ORTHO05D009187 5.3e-18 95.9 182 37.9
Pp3c2_15500 Physcomitrium patens HOM05D007263 ORTHO05D009187 6.9e-18 95.5 159 35.8
Mapoly0061s0077 Marchantia polymorpha HOM05D007263 ORTHO05D009187 3.8e-16 89.7 200 32.0
Nitab4.5_0002300g0100 Nicotiana tabacum HOM05D007263 ORTHO05D009187 7.2e-15 85.5 150 40.0
Cpa.g.c47634 Carica papaya HOM05D007263 ORTHO05D009187 3.6e-14 83.2 105 45.7
Peaxi162Scf00342g00119 Petunia axillaris HOM05D007263 ORTHO05D009187 5.3e-10 69.3 191 33.0
SEGI_12571 Sequoiadendron giganteum HOM05D007263 ORTHO05D009187 1.7e-08 64.3 98 39.8
Os12g0124000 Oryza sativa ssp. japonica HOM05D007263 ORTHO05D009187 6.1e-06 55.8 181 27.6
AagrBONN_evm.TU.Sc2ySwM_117.94 Anthoceros agrestis HOM05D007263 ORTHO05D009187 8.0e-06 55.5 79 40.5


User provided reference genes

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