Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_23527 Corylus avellana HOM05D007274 ORTHO05D009194 7.2e-33 143.3 70 100.0
Cfa010139 Carpinus fangiana HOM05D007274 ORTHO05D009194 6.7e-31 136.7 70 94.3
AT5G22875 Arabidopsis thaliana HOM05D007274 ORTHO05D009194 3.7e-29 131.0 70 88.6
AL6G34010 Arabidopsis lyrata HOM05D007274 ORTHO05D009194 4.8e-29 130.6 70 88.6
BcaB05g22677 Brassica carinata HOM05D007274 ORTHO05D009194 6.3e-29 130.2 70 87.1
BcaB08g36400 Brassica carinata HOM05D007274 ORTHO05D009194 6.3e-29 130.2 70 87.1
BcaC04g19606 Brassica carinata HOM05D007274 ORTHO05D009194 6.3e-29 130.2 70 87.1
C09p53770 Brassica napus HOM05D007274 ORTHO05D009194 6.3e-29 130.2 70 87.1
BolC9t58252H Brassica oleracea HOM05D007274 ORTHO05D009194 6.3e-29 130.2 70 87.1
CARHR190660 Cardamine hirsuta HOM05D007274 ORTHO05D009194 6.3e-29 130.2 70 87.1
Thhalv10015213m.g Eutrema salsugineum HOM05D007274 ORTHO05D009194 6.3e-29 130.2 70 87.1
Sp6g22530 Schrenkiella parvula HOM05D007274 ORTHO05D009194 6.3e-29 130.2 70 87.1
Haze_23532 Corylus avellana HOM05D007274 ORTHO05D009194 1.1e-28 129.4 70 90.0
THA.LOC109116051 Tarenaya hassleriana HOM05D007274 ORTHO05D009194 1.8e-28 128.6 70 85.7
A10p18160 Brassica napus HOM05D007274 ORTHO05D009194 4.1e-28 127.5 70 85.7
BraA10t43891Z Brassica rapa HOM05D007274 ORTHO05D009194 4.1e-28 127.5 70 85.7
Carub.0006s2065 Capsella rubella HOM05D007274 ORTHO05D009194 5.3e-28 127.1 70 85.7
RcHm_v2.0_Chr5g0056551 Rosa chinensis HOM05D007274 ORTHO05D009194 6.9e-28 126.7 70 85.7
Haze_08394 Corylus avellana HOM05D007274 ORTHO05D009194 1.2e-27 125.9 81 77.8
FAN21G0952 Fragaria x ananassa HOM05D007274 ORTHO05D009194 1.2e-27 125.9 70 85.7
MD03G1128500 Malus domestica HOM05D007274 ORTHO05D009194 1.2e-27 125.9 70 84.3
Sed0003405 Sechium edule HOM05D007274 ORTHO05D009194 1.2e-27 125.9 70 82.9
FAN16G2799 Fragaria x ananassa HOM05D007274 ORTHO05D009194 2.0e-27 125.2 69 84.1
QL01p014890 Quercus lobata HOM05D007274 ORTHO05D009194 2.0e-27 125.2 68 82.4
FvH4_3g30550 Fragaria vesca HOM05D007274 ORTHO05D009194 2.6e-27 124.8 70 84.3
FAN11G1565 Fragaria x ananassa HOM05D007274 ORTHO05D009194 2.6e-27 124.8 70 84.3
CiPaw.14G106900 Carya illinoinensis HOM05D007274 ORTHO05D009194 3.4e-27 124.4 70 82.9
Lj3g0015703 Lotus japonicus HOM05D007274 ORTHO05D009194 3.4e-27 124.4 70 82.9
Aa31LG1G12850 Aethionema arabicum HOM05D007274 ORTHO05D009194 4.5e-27 124.0 70 84.3
AUR62024013 Chenopodium quinoa HOM05D007274 ORTHO05D009194 4.5e-27 124.0 72 84.7
Ciclev10029644m.g Citrus clementina HOM05D007274 ORTHO05D009194 4.5e-27 124.0 71 84.5
Thecc.09G297800 Theobroma cacao HOM05D007274 ORTHO05D009194 5.9e-27 123.6 70 80.0
Prupe.6G113700 Prunus persica HOM05D007274 ORTHO05D009194 1.0e-26 122.9 70 82.9
Cpa.g.sc47.5 Carica papaya HOM05D007274 ORTHO05D009194 1.7e-26 122.1 70 81.4
AUR62041328 Chenopodium quinoa HOM05D007274 ORTHO05D009194 1.7e-26 122.1 72 83.3
ClCG02G021670 Citrullus lanatus HOM05D007274 ORTHO05D009194 1.7e-26 122.1 70 80.0
Sc06g0006140 Simmondsia chinensis HOM05D007274 ORTHO05D009194 1.7e-26 122.1 72 80.6
Ca_10763_v3 Cicer arietinum L. HOM05D007274 ORTHO05D009194 2.2e-26 121.7 70 80.0
Lalb_Chr19g0136881 Lupinus albus HOM05D007274 ORTHO05D009194 2.2e-26 121.7 70 80.0
CSS0018211 Camellia sinensis var. sinensis HOM05D007274 ORTHO05D009194 5.0e-26 120.6 71 83.1
CANSAT64G0704 Cannabis sativa HOM05D007274 ORTHO05D009194 5.0e-26 120.6 69 81.2
Oeu007727.1 Olea europaea HOM05D007274 ORTHO05D009194 5.0e-26 120.6 72 83.3
vmacro03251 Vaccinium macrocarpon HOM05D007274 ORTHO05D009194 6.5e-26 120.2 73 80.8
Psat7g223680 Pisum sativum HOM05D007274 ORTHO05D009194 8.5e-26 119.8 70 80.0
Rhsim13G0101500 Rhododendron simsii HOM05D007274 ORTHO05D009194 8.5e-26 119.8 73 82.2
Ah.01g004810 Amaranthus hybridus HOM05D007274 ORTHO05D009194 1.1e-25 119.4 72 81.9
TPR.G36741 Trifolium pratense HOM05D007274 ORTHO05D009194 1.1e-25 119.4 70 78.6
Medtr4g057190 Medicago truncatula HOM05D007274 ORTHO05D009194 2.5e-25 118.2 69 78.3
Manes.04G012400 Manihot esculenta HOM05D007274 ORTHO05D009194 3.2e-25 117.9 71 80.3
Rhsim13G0101200 Rhododendron simsii HOM05D007274 ORTHO05D009194 3.2e-25 117.9 73 80.8
Sabra04G0148000 Salix brachista HOM05D007274 ORTHO05D009194 3.2e-25 117.9 71 80.3
Solyc11g066450.2 Solanum lycopersicum HOM05D007274 ORTHO05D009194 3.2e-25 117.9 73 78.1
Sopen11g026200 Solanum pennellii HOM05D007274 ORTHO05D009194 3.2e-25 117.9 73 78.1
PGSC0003DMG401000458 Solanum tuberosum HOM05D007274 ORTHO05D009194 3.2e-25 117.9 73 78.1
PGR102G1958 Punica granatum HOM05D007274 ORTHO05D009194 4.2e-25 117.5 71 77.5
Hund00829 Selenicereus undatus HOM05D007274 ORTHO05D009194 4.2e-25 117.5 72 79.2
Actinidia07190 Actinidia chinensis HOM05D007274 ORTHO05D009194 5.5e-25 117.1 73 78.1
EL10Ac9g21016 Beta vulgaris HOM05D007274 ORTHO05D009194 5.5e-25 117.1 70 80.0
Potri.004G217300 Populus trichocarpa HOM05D007274 ORTHO05D009194 7.2e-25 116.7 71 78.9
PSO384G1249 Papaver somniferum HOM05D007274 ORTHO05D009194 1.2e-24 115.9 74 79.7
Peaxi162Scf00983g00003 Petunia axillaris HOM05D007274 ORTHO05D009194 1.6e-24 115.5 72 75.0
SalBow6G3121 Salvia bowleyana HOM05D007274 ORTHO05D009194 2.1e-24 115.2 72 79.2
SGA_v2.0_scaffold277G46704 Striga asiatica HOM05D007274 ORTHO05D009194 2.1e-24 115.2 72 77.8
Cc01_g10210 Coffea canephora HOM05D007274 ORTHO05D009194 2.7e-24 114.8 73 75.3
Gohir.D09G062900 Gossypium hirsutum HOM05D007274 ORTHO05D009194 2.7e-24 114.8 70 78.6
Gorai.006G077700 Gossypium raimondii HOM05D007274 ORTHO05D009194 2.7e-24 114.8 70 78.6
Lsat_1_v5_gn_1_64881 Lactuca sativa HOM05D007274 ORTHO05D009194 2.7e-24 114.8 73 79.5
arahy.Tifrunner.gnm1.ann1.BZT54Z Arachis hypogaea HOM05D007274 ORTHO05D009194 3.6e-24 114.4 70 75.7
arahy.Tifrunner.gnm1.ann1.F7FWRZ Arachis hypogaea HOM05D007274 ORTHO05D009194 3.6e-24 114.4 70 75.7
Duzib150G1296 Durio zibethinus HOM05D007274 ORTHO05D009194 3.6e-24 114.4 70 77.1
Duzib150G1526 Durio zibethinus HOM05D007274 ORTHO05D009194 3.6e-24 114.4 70 77.1
MBI04_g08417_MAGBIO Magnolia biondii HOM05D007274 ORTHO05D009194 3.6e-24 114.4 69 78.3
CSS0039770 Camellia sinensis var. sinensis HOM05D007274 ORTHO05D009194 4.7e-24 114.0 73 76.7
Migut.D02299 Erythranthe guttata HOM05D007274 ORTHO05D009194 4.7e-24 114.0 72 79.2
Gohir.A09G064000 Gossypium hirsutum HOM05D007274 ORTHO05D009194 7.9e-24 113.2 70 77.1
Nitab4.5_0009628g0020 Nicotiana tabacum HOM05D007274 ORTHO05D009194 7.9e-24 113.2 73 75.3
DCAR_022681 Daucus carota HOM05D007274 ORTHO05D009194 1.0e-23 112.8 72 77.8
COL.COLO4_19207 Corchorus olitorius HOM05D007274 ORTHO05D009194 1.4e-23 112.5 70 74.3
ECA248G0925 Erigeron canadensis HOM05D007274 ORTHO05D009194 1.4e-23 112.5 72 75.0
CAN.G546.54 Capsicum annuum HOM05D007274 ORTHO05D009194 1.8e-23 112.1 73 78.1
Nitab4.5_0000173g0170 Nicotiana tabacum HOM05D007274 ORTHO05D009194 1.8e-23 112.1 73 74.0
Atru.chr3.3502 Acer truncatum HOM05D007274 ORTHO05D009194 3.0e-23 111.3 65 83.1
HanXRQChr11g0346021 Helianthus annuus HOM05D007274 ORTHO05D009194 3.0e-23 111.3 72 75.0
HPP92_002407 Vanilla planifolia HOM05D007274 ORTHO05D009194 2.6e-22 108.2 71 71.8
CSS0045495 Camellia sinensis var. sinensis HOM05D007274 ORTHO05D009194 4.4e-22 107.5 73 72.6
Os04g0165500 Oryza sativa ssp. japonica HOM05D007274 ORTHO05D009194 4.4e-22 107.5 71 69.0
CSS0014818 Camellia sinensis var. sinensis HOM05D007274 ORTHO05D009194 5.7e-22 107.1 73 72.6
Nn2g13873 Nelumbo nucifera HOM05D007274 ORTHO05D009194 5.7e-22 107.1 69 71.0
unitig_899.g15364 Utricularia gibba HOM05D000376 ORTHO05D000237 5.7e-22 107.1 69 76.8
Glyma.12G082200 Glycine max HOM05D007274 ORTHO05D009194 7.4e-22 106.7 62 77.4
BNapus_Darmor_BZH_scaffold_38p00270 Brassica napus HOM05D007274 ORTHO05D009194 1.7e-21 105.5 64 79.7
C02p11370 Brassica napus HOM05D007274 ORTHO05D009194 1.7e-21 105.5 64 79.7
Glyma.11G192200 Glycine max HOM05D007274 ORTHO05D009194 2.8e-21 104.8 64 73.4
Nn5g27554 Nelumbo nucifera HOM05D007274 ORTHO05D009194 2.8e-21 104.8 68 73.5
Phvul.005G069100 Phaseolus vulgaris HOM05D007274 ORTHO05D009194 4.8e-21 104.0 62 75.8
Phvul.011G086800 Phaseolus vulgaris HOM05D007274 ORTHO05D009194 4.8e-21 104.0 62 75.8
BraA02t05697Z Brassica rapa HOM05D007274 ORTHO05D009194 1.4e-20 102.4 64 78.1
GSVIVG01031456001 Vitis vinifera HOM05D007274 ORTHO05D009194 5.3e-20 100.5 71 66.2
Aqoxy1G01060 Aquilegia oxysepala HOM05D007274 ORTHO05D009194 1.2e-19 99.4 69 68.1
ATR0043G009 Amborella trichopoda HOM05D007274 ORTHO05D009194 5.9e-19 97.1 63 68.3
CDE04G2982 Ceratophyllum demersum HOM05D007274 ORTHO05D009194 2.9e-18 94.7 64 67.2
SEGI_23633 Sequoiadendron giganteum HOM05D007274 ORTHO05D009194 1.6e-16 89.0 63 69.8
MD11G1149300 Malus domestica HOM05D007274 ORTHO05D009194 1.0e-15 86.3 50 84.0
Mapoly0009s0144 Marchantia polymorpha HOM05D007274 ORTHO05D009194 1.4e-15 85.9 59 62.7
Pp3c6_6370 Physcomitrium patens HOM05D007274 ORTHO05D009194 3.1e-12 74.7 59 61.0
Lsat_1_v5_gn_1_64921 Lactuca sativa HOM05D007274 ORTHO05D009194 7.0e-12 73.6 65 61.5
SHI06197 Sapria himalayana HOM05D005377 ORTHO05D003034 5.9e-11 70.5 56 64.3
TAR369G0919 Trochodendron aralioides HOM05D007274 ORTHO05D009194 5.0e-10 67.4 37 81.1


User provided reference genes

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