Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_23441 Corylus avellana HOM05D001970 ORTHO05D006581 3.4e-74 281.6 141 100.0
Cfa010075 Carpinus fangiana HOM05D001970 ORTHO05D006581 1.5e-42 176.4 106 87.7
CiPaw.13G140300 Carya illinoinensis HOM05D001970 ORTHO05D006581 1.2e-39 166.8 106 82.1
QL01p013573 Quercus lobata HOM05D001970 ORTHO05D006581 1.1e-37 160.2 104 79.8
Ciclev10029614m.g Citrus clementina HOM05D001970 ORTHO05D006581 1.2e-34 150.2 112 68.8
Eucgr.J00434 Eucalyptus grandis HOM05D001970 ORTHO05D006581 7.6e-34 147.5 106 70.8
Dinv12514 Davidia involucrata HOM05D001970 ORTHO05D006581 1.7e-33 146.4 108 71.3
Duzib168G1330 Durio zibethinus HOM05D001970 ORTHO05D006581 1.7e-33 146.4 106 73.6
Duzib170G0409 Durio zibethinus HOM05D001970 ORTHO05D006581 2.2e-33 146.0 106 71.7
Hma1.2p1_0695F.1_g204430 Hydrangea macrophylla HOM05D001970 ORTHO05D006581 1.9e-32 142.9 104 70.2
Actinidia07215 Actinidia chinensis HOM05D001970 ORTHO05D006581 2.5e-32 142.5 106 69.8
Thecc.09G290500 Theobroma cacao HOM05D001970 ORTHO05D006581 2.5e-32 142.5 106 69.8
Dinv29432 Davidia involucrata HOM05D001970 ORTHO05D006581 3.2e-32 142.1 104 70.2
Gohir.A05G083300 Gossypium hirsutum HOM05D001970 ORTHO05D006581 3.2e-32 142.1 106 68.9
Lalb_Chr24g0395181 Lupinus albus HOM05D001970 ORTHO05D006581 4.2e-32 141.7 106 69.8
CSS0025337 Camellia sinensis var. sinensis HOM05D001970 ORTHO05D006581 1.2e-31 140.2 119 63.9
DCAR_012170 Daucus carota HOM05D001970 ORTHO05D006581 1.6e-31 139.8 103 67.0
Gohir.D05G086300 Gossypium hirsutum HOM05D001970 ORTHO05D006581 2.1e-31 139.4 106 67.9
Phvul.005G126400 Phaseolus vulgaris HOM05D001970 ORTHO05D006581 2.7e-31 139.0 109 65.1
Rhsim01G0207400 Rhododendron simsii HOM05D001970 ORTHO05D006581 2.7e-31 139.0 105 68.6
TAR636G2116 Trochodendron aralioides HOM05D001970 ORTHO05D006581 2.7e-31 139.0 106 67.0
Ah.01g004530 Amaranthus hybridus HOM05D001970 ORTHO05D006581 6.1e-31 137.9 102 64.7
COL.COLO4_19307 Corchorus olitorius HOM05D001970 ORTHO05D006581 7.9e-31 137.5 106 66.0
VMungo1080G0720 Vigna mungo HOM05D001970 ORTHO05D006581 7.9e-31 137.5 109 64.2
Gorai.009G087900 Gossypium raimondii HOM05D001970 ORTHO05D006581 1.0e-30 137.1 106 67.0
Lj3g0026796 Lotus japonicus HOM05D001970 ORTHO05D006581 1.8e-30 136.3 105 66.7
TAR633G0932 Trochodendron aralioides HOM05D001970 ORTHO05D006581 1.8e-30 136.3 106 67.0
Glyma.12G182300 Glycine max HOM05D001970 ORTHO05D006581 2.3e-30 136.0 106 66.0
TWI31G0398 Tripterygium wilfordii HOM05D001970 ORTHO05D006581 3.0e-30 135.6 106 66.0
Cc01_g09730 Coffea canephora HOM05D001970 ORTHO05D006581 3.9e-30 135.2 106 64.2
Glyma.13G318600 Glycine max HOM05D001970 ORTHO05D006581 5.1e-30 134.8 106 65.1
MD11G1158500 Malus domestica HOM05D001970 ORTHO05D006581 8.7e-30 134.0 104 67.3
Sc12g0004240 Simmondsia chinensis HOM05D001970 ORTHO05D006581 8.7e-30 134.0 105 62.9
AUR62023923 Chenopodium quinoa HOM05D001970 ORTHO05D006581 1.5e-29 133.3 102 63.7
Oeu048489.1 Olea europaea HOM05D001970 ORTHO05D006581 1.9e-29 132.9 107 66.4
arahy.Tifrunner.gnm1.ann1.XX1T89 Arachis hypogaea HOM05D001970 ORTHO05D006581 2.5e-29 132.5 103 68.9
Oeu051618.1 Olea europaea HOM05D001970 ORTHO05D006581 2.5e-29 132.5 102 66.7
Atru.chr3.3363 Acer truncatum HOM05D001970 ORTHO05D006581 4.3e-29 131.7 103 66.0
Ca_01674_v3 Cicer arietinum L. HOM05D001970 ORTHO05D006581 4.3e-29 131.7 109 63.3
FAN25G0696 Fragaria x ananassa HOM05D001970 ORTHO05D006581 4.3e-29 131.7 102 66.7
Gohir.A08G003750 Gossypium hirsutum HOM05D001970 ORTHO05D006581 4.3e-29 131.7 103 66.0
Psat5g255760 Pisum sativum HOM05D001970 ORTHO05D006581 4.3e-29 131.7 105 64.8
Hund07680 Selenicereus undatus HOM05D001970 ORTHO05D006581 4.3e-29 131.7 105 62.9
SGA_v2.0_scaffold83G26424 Striga asiatica HOM05D001970 ORTHO05D006581 4.3e-29 131.7 105 64.8
AUR62038317 Chenopodium quinoa HOM05D001970 ORTHO05D006581 5.7e-29 131.3 102 62.7
MD03G1136000 Malus domestica HOM05D001970 ORTHO05D006581 5.7e-29 131.3 104 65.4
EL10Ac9g21094 Beta vulgaris HOM05D001970 ORTHO05D006581 7.4e-29 131.0 102 62.7
Gohir.D08G014100 Gossypium hirsutum HOM05D001970 ORTHO05D006581 7.4e-29 131.0 103 66.0
TWI75G0459 Tripterygium wilfordii HOM05D001970 ORTHO05D006581 7.4e-29 131.0 105 61.9
arahy.Tifrunner.gnm1.ann1.4XXP0Y Arachis hypogaea HOM05D001970 ORTHO05D006581 9.7e-29 130.6 107 66.4
FAN16G1916 Fragaria x ananassa HOM05D001970 ORTHO05D006581 9.7e-29 130.6 102 65.7
Nitab4.5_0006089g0070 Nicotiana tabacum HOM05D001970 ORTHO05D006581 9.7e-29 130.6 99 64.6
RcHm_v2.0_Chr5g0055001 Rosa chinensis HOM05D001970 ORTHO05D006581 9.7e-29 130.6 102 66.7
MSTRG.12357 Avicennia marina HOM05D001970 ORTHO05D006581 2.8e-28 129.0 97 63.9
Hund00766 Selenicereus undatus HOM05D001970 ORTHO05D006581 2.8e-28 129.0 102 61.8
Gorai.004G008400 Gossypium raimondii HOM05D001970 ORTHO05D006581 3.7e-28 128.6 103 65.0
HanXRQChr01g0016781 Helianthus annuus HOM05D001970 ORTHO05D006581 3.7e-28 128.6 105 62.9
Medtr2g084985 Medicago truncatula HOM05D001970 ORTHO05D006581 3.7e-28 128.6 105 63.8
FvH4_3g29640 Fragaria vesca HOM05D001970 ORTHO05D006581 4.8e-28 128.3 102 64.7
FAN11G0699 Fragaria x ananassa HOM05D001970 ORTHO05D006581 4.8e-28 128.3 102 64.7
Lsat_1_v5_gn_1_62140 Lactuca sativa HOM05D001970 ORTHO05D006581 4.8e-28 128.3 104 62.5
Phvul.011G091300 Phaseolus vulgaris HOM05D001970 ORTHO05D006581 4.8e-28 128.3 109 58.7
PGR119G0344 Punica granatum HOM05D001970 ORTHO05D006581 4.8e-28 128.3 102 63.7
CANSAT54G1595 Cannabis sativa HOM05D001970 ORTHO05D006581 8.2e-28 127.5 104 60.6
TPR.G32359 Trifolium pratense HOM05D001970 ORTHO05D006581 8.2e-28 127.5 105 61.9
Aqoxy4G02879 Aquilegia oxysepala HOM05D001970 ORTHO05D006581 1.1e-27 127.1 105 62.9
ECA248G3685 Erigeron canadensis HOM05D001970 ORTHO05D006581 1.4e-27 126.7 102 62.7
Nitab4.5_0011810g0030 Nicotiana tabacum HOM05D001970 ORTHO05D006581 1.4e-27 126.7 98 63.3
Sabra04G0126300 Salix brachista HOM05D001970 ORTHO05D006581 1.4e-27 126.7 103 63.1
MSTRG.17724 Avicennia marina HOM05D001970 ORTHO05D006581 2.4e-27 125.9 104 63.5
MBI17_g19801_MAGBIO Magnolia biondii HOM05D001970 ORTHO05D006581 2.4e-27 125.9 106 59.4
MELO3C021447.2 Cucumis melo HOM05D001970 ORTHO05D006581 3.1e-27 125.6 102 62.7
CsaV3_6G014780 Cucumis sativus L. HOM05D001970 ORTHO05D006581 3.1e-27 125.6 102 62.7
SalBow3G0645 Salvia bowleyana HOM05D001970 ORTHO05D006581 3.1e-27 125.6 104 60.6
Glyma.11G188300 Glycine max HOM05D001970 ORTHO05D006581 4.1e-27 125.2 106 60.4
Peaxi162Scf00002g05423 Petunia axillaris HOM05D001970 ORTHO05D006581 5.3e-27 124.8 103 60.2
ClCG02G021950 Citrullus lanatus HOM05D001970 ORTHO05D006581 9.1e-27 124.0 103 60.2
Prupe.6G120300 Prunus persica HOM05D001970 ORTHO05D006581 9.1e-27 124.0 104 59.6
Potri.009G148100 Populus trichocarpa HOM05D001970 ORTHO05D006581 1.2e-26 123.6 106 61.3
Sed0013424 Sechium edule HOM05D001970 ORTHO05D006581 2.0e-26 122.9 103 61.2
Potri.004G187500 Populus trichocarpa HOM05D001970 ORTHO05D006581 2.6e-26 122.5 107 59.8
HanXRQChr11g0346641 Helianthus annuus HOM05D001970 ORTHO05D006581 3.4e-26 122.1 102 60.8
Glyma.12G086100 Glycine max HOM05D001970 ORTHO05D006581 5.9e-26 121.3 105 58.1
PGR102G2963 Punica granatum HOM05D001970 ORTHO05D006581 5.9e-26 121.3 105 59.0
Migut.N02510 Erythranthe guttata HOM05D001970 ORTHO05D006581 1.0e-25 120.6 102 57.8
Glyma.01G075700 Glycine max HOM05D001970 ORTHO05D006581 2.9e-25 119.0 106 57.5
PSO339G2368 Papaver somniferum HOM05D001970 ORTHO05D006581 8.5e-25 117.5 106 55.7
Lalb_Chr03g0027951 Lupinus albus HOM05D001970 ORTHO05D006581 1.1e-24 117.1 105 57.1
CAN.G644.23 Capsicum annuum HOM05D001970 ORTHO05D006581 1.4e-24 116.7 103 56.3
Nn2g14038 Nelumbo nucifera HOM05D001970 ORTHO05D006581 1.9e-24 116.3 106 55.7
Psat7g190320 Pisum sativum HOM05D001970 ORTHO05D006581 1.9e-24 116.3 106 55.7
Ca_19379_v3 Cicer arietinum L. HOM05D001970 ORTHO05D006581 2.5e-24 115.9 106 57.5
PSO384G2868 Papaver somniferum HOM05D001970 ORTHO05D006581 2.5e-24 115.9 106 55.7
MELO3C004785.2 Cucumis melo HOM05D001970 ORTHO05D006581 3.2e-24 115.5 105 56.2
CsaV3_1G014560 Cucumis sativus L. HOM05D001970 ORTHO05D006581 3.2e-24 115.5 103 57.3
TPR.G15579 Trifolium pratense HOM05D001970 ORTHO05D006581 5.5e-24 114.8 106 56.6
Sed0015386 Sechium edule HOM05D001970 ORTHO05D006581 7.2e-24 114.4 105 55.2
ClCG01G012610 Citrullus lanatus HOM05D001970 ORTHO05D006581 9.4e-24 114.0 137 47.4
Glyma.09G127900 Glycine max HOM05D001970 ORTHO05D006581 1.2e-23 113.6 106 55.7
Lalb_Chr19g0136721 Lupinus albus HOM05D001970 ORTHO05D006581 1.2e-23 113.6 105 56.2
unitig_22.g5664 Utricularia gibba HOM05D001970 ORTHO05D006581 2.1e-23 112.8 102 55.9
Glyma.13G008100 Glycine max HOM05D001970 ORTHO05D006581 3.6e-23 112.1 106 55.7
Peaxi162Scf00002g00529 Petunia axillaris HOM05D001970 ORTHO05D006581 3.6e-23 112.1 102 51.0
vmacro14360 Vaccinium macrocarpon HOM05D001970 ORTHO05D006581 3.6e-23 112.1 110 56.4
Solyc11g066950.2 Solanum lycopersicum HOM05D001970 ORTHO05D006581 4.6e-23 111.7 101 55.4
THA.LOC104799538 Tarenaya hassleriana HOM05D001970 ORTHO05D006581 4.6e-23 111.7 99 57.6
PGSC0003DMG400026540 Solanum tuberosum HOM05D001970 ORTHO05D006581 6.1e-23 111.3 101 54.5
Peaxi162Scf00002g00534 Petunia axillaris HOM05D001970 ORTHO05D006581 1.0e-22 110.5 102 50.0
THA.LOC104810906 Tarenaya hassleriana HOM05D001970 ORTHO05D006581 1.0e-22 110.5 104 54.8
arahy.Tifrunner.gnm1.ann1.7YIN5C Arachis hypogaea HOM05D001970 ORTHO05D006581 1.8e-22 109.8 103 52.4
arahy.Tifrunner.gnm1.ann1.86JG4M Arachis hypogaea HOM05D001970 ORTHO05D006581 1.8e-22 109.8 103 52.4
Manes.11G158200 Manihot esculenta HOM05D001970 ORTHO05D006581 1.8e-22 109.8 99 57.6
CDE04G2325 Ceratophyllum demersum HOM05D001970 ORTHO05D006581 3.0e-22 109.0 102 54.9
Sopen11g026670 Solanum pennellii HOM05D001970 ORTHO05D006581 3.0e-22 109.0 100 54.0
AL6G33610 Arabidopsis lyrata HOM05D001970 ORTHO05D006581 1.5e-21 106.7 105 52.4
Aa31LG1G13030 Aethionema arabicum HOM05D001970 ORTHO05D006581 2.6e-21 105.9 106 50.0
Rhsim12G0094000 Rhododendron simsii HOM05D001970 ORTHO05D006581 2.6e-21 105.9 65 78.5
Sp6g22730 Schrenkiella parvula HOM05D001970 ORTHO05D006581 2.6e-21 105.9 106 50.9
AT5G22580 Arabidopsis thaliana HOM05D001970 ORTHO05D006581 3.3e-21 105.5 105 51.4
CARHR190970 Cardamine hirsuta HOM05D001970 ORTHO05D006581 3.3e-21 105.5 105 51.4
A10p18300 Brassica napus HOM05D001970 ORTHO05D006581 4.4e-21 105.1 106 50.0
BraA10t43907Z Brassica rapa HOM05D001970 ORTHO05D006581 4.4e-21 105.1 106 50.0
ATR0820G029 Amborella trichopoda HOM05D001970 ORTHO05D006581 5.7e-21 104.8 102 48.0
Thhalv10015069m.g Eutrema salsugineum HOM05D001970 ORTHO05D006581 7.4e-21 104.4 106 50.0
BraA02t05667Z Brassica rapa HOM05D001970 ORTHO05D006581 9.7e-21 104.0 106 50.9
Carub.0006s2032 Capsella rubella HOM05D001970 ORTHO05D006581 1.3e-20 103.6 105 50.5
Os11g0150400 Oryza sativa ssp. japonica HOM05D001970 ORTHO05D006581 1.7e-20 103.2 102 49.0
BcaC04g19590 Brassica carinata HOM05D001970 ORTHO05D006581 2.2e-20 102.8 106 49.1
C09p53960 Brassica napus HOM05D001970 ORTHO05D006581 2.2e-20 102.8 106 49.1
BolC9t58268H Brassica oleracea HOM05D001970 ORTHO05D006581 2.2e-20 102.8 106 49.1
Sed0011225 Sechium edule HOM05D001970 ORTHO05D006581 2.2e-20 102.8 103 55.3
BcaB08g36415 Brassica carinata HOM05D001970 ORTHO05D006581 3.7e-20 102.1 105 50.5
C02p11030 Brassica napus HOM05D000051 ORTHO05D000015 1.1e-19 100.5 106 49.1
BolC2t07174H Brassica oleracea HOM05D001970 ORTHO05D006581 1.1e-19 100.5 106 49.1
THA.LOC104800551 Tarenaya hassleriana HOM05D001970 ORTHO05D006581 3.1e-19 99.0 94 52.1
CAN.G644.24 Capsicum annuum HOM05D001970 ORTHO05D006581 9.1e-19 97.4 104 48.1
Manes.04G007800 Manihot esculenta HOM05D001970 ORTHO05D006581 1.5e-18 96.7 102 48.0
Peaxi162Scf37203g00001 Petunia axillaris HOM05D001970 ORTHO05D006581 1.0e-17 94.0 64 60.9
BNapus_Darmor_BZH_scaffold_38p00560 Brassica napus HOM05D001970 ORTHO05D006581 2.2e-17 92.8 110 46.4
ATR1096G001 Amborella trichopoda HOM05D001970 ORTHO05D006581 3.7e-12 75.5 57 54.4
PGSC0003DMG402026539 Solanum tuberosum HOM05D001970 ORTHO05D006581 3.1e-11 72.4 100 41.0
Potri.010G037500 Populus trichocarpa HOM05D001970 ORTHO05D004069 9.1e-11 70.9 106 34.9
Potri.010G150900 Populus trichocarpa HOM05D001970 ORTHO05D004069 1.2e-10 70.5 104 39.4
Prupe.1G111200 Prunus persica HOM05D001970 ORTHO05D004069 4.5e-10 68.6 106 34.9
PGR031G3476 Punica granatum HOM05D001970 ORTHO05D004069 5.9e-10 68.2 100 37.0
Potri.010G037200 Populus trichocarpa HOM05D001970 ORTHO05D004069 7.7e-10 67.8 106 34.0
ECA234G1379 Erigeron canadensis HOM05D001970 ORTHO05D004069 1.3e-09 67.0 99 34.3
Sed0005247 Sechium edule HOM05D001970 ORTHO05D004069 1.3e-09 67.0 102 33.3
Dinv29434 Davidia involucrata HOM05D001970 ORTHO05D006581 3.8e-09 65.5 97 36.1
ATR0757G143 Amborella trichopoda HOM05D001970 ORTHO05D004069 5.0e-09 65.1 103 34.0
arahy.Tifrunner.gnm1.ann1.KB2WLH Arachis hypogaea HOM05D001970 ORTHO05D004069 5.0e-09 65.1 100 33.0
HanXRQChr16g0519591 Helianthus annuus HOM05D001970 ORTHO05D004069 5.0e-09 65.1 99 33.3
Lsat_1_v5_gn_4_46140 Lactuca sativa HOM05D001970 ORTHO05D004069 6.5e-09 64.7 99 33.3
MBI19_g32692_MAGBIO Magnolia biondii HOM05D003039 ORTHO05D009478 6.5e-09 64.7 106 33.0
Manes.04G118100 Manihot esculenta HOM05D001970 ORTHO05D004069 6.5e-09 64.7 100 36.0
Ciclev10006242m.g Citrus clementina HOM05D001970 ORTHO05D004069 8.5e-09 64.3 112 32.1
SGA_v2.0_scaffold19G08903 Striga asiatica HOM05D001970 ORTHO05D004069 8.5e-09 64.3 98 33.7
Haze_00827 Corylus avellana HOM05D001970 ORTHO05D004069 1.5e-08 63.5 98 34.7
Cfa015694 Carpinus fangiana HOM05D001970 ORTHO05D004069 1.9e-08 63.2 104 32.7
Migut.N00022 Erythranthe guttata HOM05D001970 ORTHO05D004069 2.5e-08 62.8 98 30.6
Thecc.04G307800 Theobroma cacao HOM05D001970 ORTHO05D004069 2.5e-08 62.8 105 33.3
Potri.010G151000 Populus trichocarpa HOM05D001970 ORTHO05D004069 3.2e-08 62.4 98 35.7
THA.LOC104820283 Tarenaya hassleriana HOM05D001970 ORTHO05D004069 3.2e-08 62.4 100 33.0
Zm00001eb357750 Zea mays HOM05D001970 ORTHO05D004069 5.5e-08 61.6 108 30.6
FvH4_4g20800 Fragaria vesca HOM05D001970 ORTHO05D004069 7.2e-08 61.2 100 34.0
MD16G1147500 Malus domestica HOM05D001970 ORTHO05D004069 1.2e-07 60.5 121 29.8
MSTRG.21751 Avicennia marina HOM05D001970 ORTHO05D004069 2.1e-07 59.7 98 31.6
HPP92_015244 Vanilla planifolia HOM05D001970 ORTHO05D004069 2.1e-07 59.7 95 33.7
AUR62028155 Chenopodium quinoa HOM05D001970 ORTHO05D004069 2.7e-07 59.3 100 32.0
Mapoly0058s0001 Marchantia polymorpha HOM05D001970 ORTHO05D004069 2.7e-07 59.3 103 33.0
CSS0044499 Camellia sinensis var. sinensis HOM05D001970 ORTHO05D004069 1.0e-06 57.4 98 31.6
HPP92_015245 Vanilla planifolia HOM05D001970 ORTHO05D004069 1.4e-06 57.0 107 32.7
Eucgr.B02214 Eucalyptus grandis HOM05D001970 ORTHO05D004069 4.0e-06 55.5 87 33.3
SMO147G0378 Selaginella moellendorffii HOM05D001970 ORTHO05D004069 8.8e-06 54.3 95 32.6


User provided reference genes

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