Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_23361 Corylus avellana HOM05D006357 ORTHO05D007925 1.5e-92 343.2 224 100.0
Cfa010003 Carpinus fangiana HOM05D006357 ORTHO05D007925 6.4e-83 311.2 164 96.3
CiPaw.13G134700 Carya illinoinensis HOM05D006357 ORTHO05D007925 1.3e-75 287.0 164 87.2
QL01p012091 Quercus lobata HOM05D006357 ORTHO05D007925 3.2e-74 282.3 164 84.1
QL01p012073 Quercus lobata HOM05D006357 ORTHO05D007925 9.2e-74 280.8 164 84.1
Phvul.011G095000 Phaseolus vulgaris HOM05D006357 ORTHO05D007925 7.3e-71 271.2 164 81.7
VMungo1127G1055 Vigna mungo HOM05D006357 ORTHO05D007925 9.5e-71 270.8 164 81.7
Prupe.6G132700 Prunus persica HOM05D006357 ORTHO05D007925 1.2e-70 270.4 164 78.7
Glyma.11G182400 Glycine max HOM05D006357 ORTHO05D007925 2.8e-70 269.2 163 81.0
MD03G1147800 Malus domestica HOM05D006357 ORTHO05D007925 1.4e-69 266.9 164 79.9
PGR119G0351 Punica granatum HOM05D006357 ORTHO05D007925 4.0e-69 265.4 165 80.0
arahy.Tifrunner.gnm1.ann1.5186VC Arachis hypogaea HOM05D006357 ORTHO05D007925 5.2e-69 265.0 165 80.6
MELO3C014499.2 Cucumis melo HOM05D006357 ORTHO05D007925 1.5e-68 263.5 162 80.2
Thecc.09G281200 Theobroma cacao HOM05D006357 ORTHO05D007925 1.5e-68 263.5 164 77.4
arahy.Tifrunner.gnm1.ann1.JXBE2X Arachis hypogaea HOM05D006357 ORTHO05D007925 2.6e-68 262.7 165 80.0
ClCG02G022220 Citrullus lanatus HOM05D006357 ORTHO05D007925 4.4e-68 261.9 162 79.0
CANSAT54G2809 Cannabis sativa HOM05D006357 ORTHO05D007925 7.5e-68 261.2 164 76.2
Ca_19414_v3 Cicer arietinum L. HOM05D006357 ORTHO05D007925 1.3e-67 260.4 164 77.4
Lalb_Chr01g0004891 Lupinus albus HOM05D006357 ORTHO05D007925 1.3e-67 260.4 164 75.0
CsaV3_6G038350 Cucumis sativus L. HOM05D006357 ORTHO05D007925 2.9e-67 259.2 162 77.8
Duzib150G0376 Durio zibethinus HOM05D006357 ORTHO05D007925 2.9e-67 259.2 164 76.8
Atru.chr3.3206 Acer truncatum HOM05D006357 ORTHO05D007925 3.7e-67 258.8 164 78.7
FvH4_3g25140 Fragaria vesca HOM05D006357 ORTHO05D007925 4.9e-67 258.5 163 77.3
Psat7g187640 Pisum sativum HOM05D006357 ORTHO05D007925 4.9e-67 258.5 164 78.0
TPR.G17225 Trifolium pratense HOM05D006357 ORTHO05D007925 1.1e-66 257.3 164 76.8
Medtr4g052840 Medicago truncatula HOM05D006357 ORTHO05D007925 1.4e-66 256.9 163 77.3
FAN21G3578 Fragaria x ananassa HOM05D006357 ORTHO05D007925 1.9e-66 256.5 163 76.7
Ca_26666_v3 Cicer arietinum L. HOM05D006357 ORTHO05D007925 3.2e-66 255.8 164 76.2
Lj3g0017887 Lotus japonicus HOM05D006357 ORTHO05D007925 3.2e-66 255.8 163 75.5
Atru.chr3.3208 Acer truncatum HOM05D006357 ORTHO05D007925 4.1e-66 255.4 164 76.8
A06p22010 Brassica napus HOM05D006357 ORTHO05D007925 9.2e-66 254.2 164 75.6
BraA06t25289Z Brassica rapa HOM05D006357 ORTHO05D007925 9.2e-66 254.2 164 75.6
Dinv22833 Davidia involucrata HOM05D006357 ORTHO05D007925 1.2e-65 253.8 164 73.8
Prupe.6G132600 Prunus persica HOM05D006357 ORTHO05D007925 1.6e-65 253.4 162 76.5
BcaC01g02047 Brassica carinata HOM05D006357 ORTHO05D007925 4.6e-65 251.9 164 75.6
C03p69190 Brassica napus HOM05D006357 ORTHO05D007925 4.6e-65 251.9 164 75.6
BolC3t19173H Brassica oleracea HOM05D006357 ORTHO05D007925 4.6e-65 251.9 164 75.6
Eucgr.J00502 Eucalyptus grandis HOM05D006357 ORTHO05D007925 4.6e-65 251.9 164 75.0
GSVIVG01036107001 Vitis vinifera HOM05D006357 ORTHO05D007925 6.0e-65 251.5 165 74.5
Gohir.D08G016000 Gossypium hirsutum HOM05D006357 ORTHO05D007925 1.3e-64 250.4 164 73.2
Gorai.004G010300 Gossypium raimondii HOM05D006357 ORTHO05D007925 1.3e-64 250.4 164 73.2
RcHm_v2.0_Chr5g0046241 Rosa chinensis HOM05D006357 ORTHO05D007925 1.3e-64 250.4 164 73.2
Ciclev10029363m.g Citrus clementina HOM05D006357 ORTHO05D007925 1.7e-64 250.0 164 74.4
Gohir.A08G005700 Gossypium hirsutum HOM05D006357 ORTHO05D007925 1.7e-64 250.0 164 73.2
Sp5g16810 Schrenkiella parvula HOM05D006357 ORTHO05D007925 2.3e-64 249.6 164 74.4
BcaB01g01165 Brassica carinata HOM05D006357 ORTHO05D007925 3.9e-64 248.8 164 74.4
CSS0003287 Camellia sinensis var. sinensis HOM05D006357 ORTHO05D007925 3.9e-64 248.8 164 75.0
Gohir.D07G114400 Gossypium hirsutum HOM05D006357 ORTHO05D007925 3.9e-64 248.8 164 73.2
Thhalv10010749m.g Eutrema salsugineum HOM05D006357 ORTHO05D007925 5.1e-64 248.4 164 75.0
Gohir.A07G110700 Gossypium hirsutum HOM05D006357 ORTHO05D007925 8.6e-64 247.7 164 73.2
CARHR104480 Cardamine hirsuta HOM05D006357 ORTHO05D007925 1.5e-63 246.9 164 73.8
Manes.11G162800 Manihot esculenta HOM05D006357 ORTHO05D007925 1.5e-63 246.9 164 73.2
TWI75G1708 Tripterygium wilfordii HOM05D006357 ORTHO05D007925 1.5e-63 246.9 163 73.0
Rhsim01G0204700 Rhododendron simsii HOM05D006357 ORTHO05D007925 1.9e-63 246.5 162 74.1
TAR633G1946 Trochodendron aralioides HOM05D006357 ORTHO05D007925 1.9e-63 246.5 162 72.2
Gorai.001G122700 Gossypium raimondii HOM05D006357 ORTHO05D007925 2.5e-63 246.1 164 72.6
TWI79G0514 Tripterygium wilfordii HOM05D006357 ORTHO05D007925 2.5e-63 246.1 163 71.8
PSO801G0234 Papaver somniferum HOM05D006357 ORTHO05D007925 7.3e-63 244.6 164 70.1
Cc01_g08980 Coffea canephora HOM05D006357 ORTHO05D007925 1.2e-62 243.8 163 71.8
PSO339G3266 Papaver somniferum HOM05D006357 ORTHO05D007925 1.2e-62 243.8 164 70.7
AT3G44380 Arabidopsis thaliana HOM05D006357 ORTHO05D007925 4.7e-62 241.9 164 72.6
Carub.0005s1011 Capsella rubella HOM05D006357 ORTHO05D007925 8.1e-62 241.1 164 71.3
MD11G1166600 Malus domestica HOM05D006357 ORTHO05D007925 8.1e-62 241.1 164 71.3
THA.LOC104814785 Tarenaya hassleriana HOM05D006357 ORTHO05D007925 8.1e-62 241.1 163 73.0
Migut.N02483 Erythranthe guttata HOM05D006357 ORTHO05D007925 1.1e-61 240.7 163 70.6
Lsat_1_v5_gn_1_59200 Lactuca sativa HOM05D006357 ORTHO05D007925 1.1e-61 240.7 165 69.7
Lj2P966T16 Lonicera japonica HOM05D006357 ORTHO05D007925 1.1e-61 240.7 164 71.3
Potri.001G218400 Populus trichocarpa HOM05D006357 ORTHO05D007925 2.3e-61 239.6 165 69.7
AL5G22540 Arabidopsis lyrata HOM05D006357 ORTHO05D007925 3.1e-61 239.2 164 72.0
Solyc11g068550.1 Solanum lycopersicum HOM05D006357 ORTHO05D007925 3.1e-61 239.2 164 69.5
Sopen11g027270 Solanum pennellii HOM05D006357 ORTHO05D007925 3.1e-61 239.2 164 69.5
Aa31LG4G13870 Aethionema arabicum HOM05D004825 ORTHO05D005415 5.2e-61 238.4 164 71.3
MBI01_g14623_MAGBIO Magnolia biondii HOM05D006357 ORTHO05D007925 5.2e-61 238.4 163 69.3
Nitab4.5_0005641g0010 Nicotiana tabacum HOM05D006357 ORTHO05D007925 5.2e-61 238.4 162 71.0
Hma1.2p1_0587F.1_g184180 Hydrangea macrophylla HOM05D006357 ORTHO05D007925 6.8e-61 238.0 164 68.9
SalBow3G2384 Salvia bowleyana HOM05D006357 ORTHO05D007925 8.9e-61 237.7 163 68.7
Sabra16G0125700 Salix brachista HOM05D006357 ORTHO05D007925 1.2e-60 237.3 165 70.3
Nitab4.5_0006120g0030 Nicotiana tabacum HOM05D006357 ORTHO05D007925 2.0e-60 236.5 162 69.8
Actinidia37077 Actinidia chinensis HOM05D006357 ORTHO05D007925 2.6e-60 236.1 161 73.3
Aqoxy2G01095 Aquilegia oxysepala HOM05D006357 ORTHO05D007925 2.6e-60 236.1 164 69.5
EL10Ac7g15835 Beta vulgaris HOM05D006357 ORTHO05D007925 9.9e-60 234.2 164 68.3
Dinv42541 Davidia involucrata HOM05D006357 ORTHO05D007925 1.3e-59 233.8 163 69.9
MSTRG.12374 Avicennia marina HOM05D006357 ORTHO05D007925 2.2e-59 233.0 163 68.1
HanXRQChr01g0024501 Helianthus annuus HOM05D006357 ORTHO05D007925 2.2e-59 233.0 165 69.1
Ah.08g215640 Amaranthus hybridus HOM05D006357 ORTHO05D007925 4.9e-59 231.9 164 69.5
Nn6g34850 Nelumbo nucifera HOM05D006357 ORTHO05D007925 1.4e-58 230.3 160 68.8
PGR102G0344 Punica granatum HOM05D006357 ORTHO05D007925 1.9e-58 229.9 163 69.3
FvH4_3g25160 Fragaria vesca HOM05D006357 ORTHO05D007925 2.4e-58 229.6 162 69.1
FAN11G2870 Fragaria x ananassa HOM05D006357 ORTHO05D007925 2.4e-58 229.6 162 69.1
FAN25G2095 Fragaria x ananassa HOM05D006357 ORTHO05D007925 3.2e-58 229.2 162 69.1
SGA_v2.0_scaffold177G39425 Striga asiatica HOM05D006357 ORTHO05D007925 3.2e-58 229.2 164 68.9
Sc06g0008780 Simmondsia chinensis HOM05D006357 ORTHO05D007925 5.4e-58 228.4 164 63.4
Sed0020794 Sechium edule HOM05D006357 ORTHO05D007925 1.2e-57 227.3 167 68.3
unitig_699.g19178 Utricularia gibba HOM05D006357 ORTHO05D007925 3.5e-57 225.7 163 67.5
Aqoxy4G02740 Aquilegia oxysepala HOM05D006357 ORTHO05D007925 3.9e-56 222.2 164 66.5
Lalb_Chr03g0028161 Lupinus albus HOM05D006357 ORTHO05D007925 3.9e-56 222.2 160 66.9
Sc21g0007020 Simmondsia chinensis HOM05D006357 ORTHO05D007925 6.2e-54 214.9 173 61.8
ECA248G3754 Erigeron canadensis HOM05D006357 ORTHO05D007925 3.1e-53 212.6 138 74.6
DCAR_006168 Daucus carota HOM05D006357 ORTHO05D007925 3.4e-52 209.1 164 62.8
Nn6g34849 Nelumbo nucifera HOM05D006357 ORTHO05D007925 3.9e-48 195.7 160 58.8
AUR62036201 Chenopodium quinoa HOM05D006357 ORTHO05D007925 4.3e-47 192.2 142 66.9
AUR62009745 Chenopodium quinoa HOM05D006357 ORTHO05D007925 2.8e-46 189.5 184 52.7
Ah.15g095880 Amaranthus hybridus HOM05D006357 ORTHO05D007925 3.1e-45 186.0 176 54.0
AUR62036192 Chenopodium quinoa HOM05D006357 ORTHO05D007925 6.9e-45 184.9 183 51.4
RcHm_v2.0_Chr5g0046191 Rosa chinensis HOM05D006357 ORTHO05D007925 3.8e-43 179.1 114 77.2
PSO384G0917 Papaver somniferum HOM05D006357 ORTHO05D007925 1.4e-42 177.2 145 63.4
PSO339G1489 Papaver somniferum HOM05D006357 ORTHO05D007925 9.3e-42 174.5 145 62.1
Os08g0558300 Oryza sativa ssp. japonica HOM05D006357 ORTHO05D007925 1.2e-41 174.1 159 56.0
Cpa.g.sc195.8 Carica papaya HOM05D006357 ORTHO05D007925 1.3e-35 154.1 102 75.5
AagrBONN_evm.TU.Sc2ySwM_117.3687 Anthoceros agrestis HOM05D006357 ORTHO05D007925 3.5e-33 146.0 157 47.1
Mapoly0079s0020 Marchantia polymorpha HOM05D006357 ORTHO05D007925 5.1e-32 142.1 164 45.1
PGSC0003DMG400026335 Solanum tuberosum HOM05D006357 ORTHO05D007925 5.1e-32 142.1 92 71.7
SEGI_40876 Sequoiadendron giganteum HOM05D006357 ORTHO05D007925 7.4e-31 138.3 163 44.2
SMO347G0335 Selaginella moellendorffii HOM05D006357 ORTHO05D007925 2.4e-29 133.3 157 44.6
Pp3c21_10640 Physcomitrium patens HOM05D006357 ORTHO05D007925 9.0e-29 131.3 169 43.8
ATR0820G064 Amborella trichopoda HOM05D006357 ORTHO05D007925 2.9e-27 126.3 168 43.5
Pp3c2_16750 Physcomitrium patens HOM05D006357 ORTHO05D007925 4.2e-26 122.5 175 41.7
Pp3c9_9450 Physcomitrium patens HOM05D006357 ORTHO05D007925 3.0e-24 116.3 147 40.8
Actinidia35469 Actinidia chinensis HOM05D006357 ORTHO05D007925 1.1e-23 114.4 78 67.9
ATR0820G202 Amborella trichopoda HOM05D006357 ORTHO05D007925 6.3e-22 108.6 120 48.3
AUR62044742 Chenopodium quinoa HOM05D006357 ORTHO05D007925 6.9e-21 105.1 75 69.3
AUR62036200 Chenopodium quinoa HOM05D006357 ORTHO05D007925 1.3e-19 100.9 81 59.3
ATR0820G128 Amborella trichopoda HOM05D006357 ORTHO05D007925 2.5e-18 96.7 84 59.5
CBR_g44534 Chara braunii HOM05D006357 ORTHO05D007925 1.6e-09 67.4 175 28.6
HPP92_019617 Vanilla planifolia HOM05D003111 ORTHO05D003502 1.0e-08 64.7 162 30.2
HPP92_019623 Vanilla planifolia HOM05D003111 ORTHO05D003502 1.4e-08 64.3 162 30.2
SHI02767 Sapria himalayana HOM05D003111 ORTHO05D003502 9.7e-07 58.2 137 30.7
HanXRQChr14g0456011 Helianthus annuus HOM05D003111 ORTHO05D003502 1.7e-06 57.4 144 27.8


User provided reference genes

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