Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_23348 Corylus avellana HOM05D000142 ORTHO05D000124 5.6e-21 103.2 48 100.0
CiPaw.13G133000 Carya illinoinensis HOM05D000142 ORTHO05D000124 2.5e-13 77.8 67 61.2
TAR623G0690 Trochodendron aralioides HOM05D000142 ORTHO05D000124 2.2e-09 64.7 67 47.8
Ciclev10029552m.g Citrus clementina HOM05D000142 ORTHO05D000124 4.9e-09 63.5 66 50.0
Nn2g14228 Nelumbo nucifera HOM05D000142 ORTHO05D000124 8.4e-09 62.8 67 44.8
GSVIVG01033897001 Vitis vinifera HOM05D000142 ORTHO05D000124 3.2e-08 60.8 67 46.3
Oeu047835.2 Olea europaea HOM05D002184 ORTHO05D000124 4.2e-08 60.5 66 43.9
MSTRG.5866 Avicennia marina HOM05D000142 ORTHO05D000124 5.5e-08 60.1 67 46.3
CSS0009420 Camellia sinensis var. sinensis HOM05D000142 ORTHO05D000124 7.1e-08 59.7 66 45.5
Rhsim03G0069800 Rhododendron simsii HOM05D002184 ORTHO05D002379 9.3e-08 59.3 66 45.5
QL07p038106 Quercus lobata HOM05D000142 ORTHO05D000124 1.2e-07 58.9 67 46.3
Ciclev10012994m.g Citrus clementina HOM05D000142 ORTHO05D000124 2.7e-07 57.8 66 45.5
Ciclev10029617m.g Citrus clementina HOM05D001197 ORTHO05D000124 4.6e-07 57.0 58 50.0
COL.COLO4_29667 Corchorus olitorius HOM05D000142 ORTHO05D000124 4.6e-07 57.0 64 43.8
Hma1.2p1_0820F.1_g224080 Hydrangea macrophylla HOM05D000142 ORTHO05D000124 4.6e-07 57.0 62 46.8
Haze_19655 Corylus avellana HOM05D002184 ORTHO05D002379 6.0e-07 56.6 66 43.9
Aa31LG11G7170 Aethionema arabicum HOM05D000142 ORTHO05D000124 7.9e-07 56.2 65 43.1
CANSAT64G2300 Cannabis sativa HOM05D000142 ORTHO05D000124 7.9e-07 56.2 64 43.8
THA.LOC104826818 Tarenaya hassleriana HOM05D000142 ORTHO05D000124 1.3e-06 55.5 63 44.4
Nitab4.5_0002036g0010 Nicotiana tabacum HOM05D000142 ORTHO05D000124 1.8e-06 55.1 63 42.9
Eucgr.B03825 Eucalyptus grandis HOM05D001197 ORTHO05D000124 2.3e-06 54.7 63 49.2
SGA_v2.0_scaffold318G48478 Striga asiatica HOM05D000142 ORTHO05D000124 2.3e-06 54.7 64 43.8
Atru.chr8.1439 Acer truncatum HOM05D000142 ORTHO05D000124 3.0e-06 54.3 66 40.9
Phvul.001G192800 Phaseolus vulgaris HOM05D000142 ORTHO05D000124 3.0e-06 54.3 66 40.9
PGR142G1864 Punica granatum HOM05D000142 ORTHO05D000124 3.0e-06 54.3 65 43.1
RcHm_v2.0_Chr3g0474861 Rosa chinensis HOM05D000142 ORTHO05D000124 3.0e-06 54.3 65 41.5
CiPaw.09G017600 Carya illinoinensis HOM05D000142 ORTHO05D000124 3.9e-06 53.9 62 45.2
Prupe.7G101000 Prunus persica HOM05D000142 ORTHO05D000124 3.9e-06 53.9 66 40.9
SalBow3G4272 Salvia bowleyana HOM05D000142 ORTHO05D000124 3.9e-06 53.9 68 47.1
Ciclev10029960m.g Citrus clementina HOM05D000142 ORTHO05D000124 5.1e-06 53.5 62 46.8
Duzib128G2013 Durio zibethinus HOM05D000142 ORTHO05D000124 5.1e-06 53.5 66 40.9
CARHR206910 Cardamine hirsuta HOM05D000142 ORTHO05D000124 6.7e-06 53.1 63 42.9
Eucgr.K02572 Eucalyptus grandis HOM05D000142 ORTHO05D000124 6.7e-06 53.1 66 42.4
MD14G1031800 Malus domestica HOM05D000142 ORTHO05D000124 6.7e-06 53.1 65 41.5
vmacro07433 Vaccinium macrocarpon HOM05D000142 ORTHO05D000124 6.7e-06 53.1 63 42.9
Cpa.g.sc104.89 Carica papaya HOM05D000142 ORTHO05D000124 8.7e-06 52.8 61 44.3
Migut.J00999 Erythranthe guttata HOM05D000142 ORTHO05D000124 8.7e-06 52.8 64 43.8
VMungo1383G0483 Vigna mungo HOM05D000142 ORTHO05D000124 8.7e-06 52.8 66 39.4


User provided reference genes

Program Settings