Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_23344 Corylus avellana HOM05D007535 ORTHO05D008520 7.6e-288 993.4 616 100.0
Cfa009985 Carpinus fangiana HOM05D007535 ORTHO05D008520 3.0e-114 416.8 305 79.0
Thecc.09G278200 Theobroma cacao HOM05D007535 ORTHO05D008520 1.6e-64 251.5 358 48.6
Cpa.g.sc195.29 Carica papaya HOM05D007535 ORTHO05D008520 1.9e-60 238.0 331 48.6
QL01p011831 Quercus lobata HOM05D007535 ORTHO05D008520 7.6e-54 216.1 417 39.3
Sabra04G0134300 Salix brachista HOM05D001716 ORTHO05D004234 1.2e-51 208.8 329 44.4
Lalb_Chr24g0393491 Lupinus albus HOM05D007535 ORTHO05D008520 3.6e-51 207.2 305 46.2
Rhsim13G0113500 Rhododendron simsii HOM05D000001 ORTHO05D000003 1.8e-50 204.9 361 44.0
vmacro03328 Vaccinium macrocarpon HOM05D007535 ORTHO05D008520 1.8e-50 204.9 321 47.0
CSS0035480 Camellia sinensis var. sinensis HOM05D007535 ORTHO05D008520 1.9e-49 201.4 372 41.7
Manes.04G001100 Manihot esculenta HOM05D007535 ORTHO05D008520 7.4e-49 199.5 363 41.6
MELO3C025588.2 Cucumis melo HOM05D007535 ORTHO05D008520 6.3e-48 196.4 349 39.5
Hma1.2p1_2164F.1_g315740 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 1.1e-47 195.7 312 43.6
CiPaw.14G097800 Carya illinoinensis HOM05D007535 ORTHO05D008520 1.2e-46 192.2 251 48.2
Gohir.A08G006800 Gossypium hirsutum HOM05D007535 ORTHO05D008520 7.7e-46 189.5 341 43.1
GSVIVG01036079001 Vitis vinifera HOM05D007535 ORTHO05D008520 1.4e-44 185.3 244 51.2
Dinv08923 Davidia involucrata HOM05D007535 ORTHO05D008520 4.2e-44 183.7 339 44.2
arahy.Tifrunner.gnm1.ann1.TGP3GH Arachis hypogaea HOM05D007535 ORTHO05D008520 7.2e-44 183.0 341 37.8
Prupe.6G137100 Prunus persica HOM05D007535 ORTHO05D008520 9.4e-44 182.6 368 37.5
Gohir.D08G017000 Gossypium hirsutum HOM05D007535 ORTHO05D008520 6.1e-43 179.9 328 43.0
Hund18777 Selenicereus undatus HOM05D007535 ORTHO05D008520 1.4e-42 178.7 358 37.7
Ciclev10029981m.g Citrus clementina HOM05D007535 ORTHO05D008520 1.8e-42 178.3 295 42.0
Atru.chr3.3166 Acer truncatum HOM05D007535 ORTHO05D008520 2.3e-42 177.9 242 48.3
Aqoxy4G02717 Aquilegia oxysepala HOM05D007535 ORTHO05D008520 3.0e-42 177.6 330 40.9
Lj3g0000707 Lotus japonicus HOM05D007535 ORTHO05D008520 3.0e-42 177.6 337 40.4
Ciclev10028368m.g Citrus clementina HOM05D007535 ORTHO05D008520 5.7e-41 173.3 272 43.8
Gorai.004G011300 Gossypium raimondii HOM05D007535 ORTHO05D008520 1.3e-40 172.2 341 41.1
Duzib150G0908 Durio zibethinus HOM05D007535 ORTHO05D008520 2.4e-39 167.9 228 51.8
Potri.004G199200 Populus trichocarpa HOM05D007535 ORTHO05D008520 4.1e-39 167.2 272 42.3
Sc12g0004620 Simmondsia chinensis HOM05D007535 ORTHO05D008520 2.0e-38 164.9 332 41.0
Actinidia07260 Actinidia chinensis HOM05D007535 ORTHO05D008520 1.7e-37 161.8 369 36.3
ClCG01G011770 Citrullus lanatus HOM05D007535 ORTHO05D008520 2.2e-37 161.4 291 39.9
Hma1.2p1_2164F.1_g315730 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 1.4e-36 158.7 666 36.8
Psat5g257880 Pisum sativum HOM05D007535 ORTHO05D008520 1.4e-36 158.7 331 37.8
TAR633G1755 Trochodendron aralioides HOM05D007535 ORTHO05D008520 2.5e-36 157.9 251 47.4
TWI79G0866 Tripterygium wilfordii HOM05D007535 ORTHO05D008520 3.2e-36 157.5 277 41.2
Sc12g0004670 Simmondsia chinensis HOM05D007535 ORTHO05D008520 5.5e-36 156.8 328 39.9
HPP92_011495 Vanilla planifolia HOM05D007535 ORTHO05D008520 5.5e-36 156.8 307 39.1
Nn6g34805 Nelumbo nucifera HOM05D007535 ORTHO05D008520 9.4e-36 156.0 248 41.9
EL10Ac7g16124 Beta vulgaris HOM05D007535 ORTHO05D008520 2.1e-35 154.8 332 34.9
RcHm_v2.0_Chr5g0046091 Rosa chinensis HOM05D007535 ORTHO05D008520 8.0e-35 152.9 279 42.7
AUR62001527 Chenopodium quinoa HOM05D007535 ORTHO05D008520 1.4e-34 152.1 365 33.4
Cc00_g20950 Coffea canephora HOM05D007535 ORTHO05D008520 2.3e-34 151.4 253 43.5
Nitab4.5_0008177g0030 Nicotiana tabacum HOM05D007535 ORTHO05D008520 8.8e-34 149.4 253 43.1
DCAR_024892 Daucus carota HOM05D007535 ORTHO05D008520 4.4e-33 147.1 339 35.7
FAN25G3072 Fragaria x ananassa HOM05D007535 ORTHO05D008520 4.4e-33 147.1 264 43.2
Lj2A969T70 Lonicera japonica HOM05D007535 ORTHO05D008520 5.7e-33 146.7 331 39.3
Ciclev10028316m.g Citrus clementina HOM05D007535 ORTHO05D008520 1.7e-32 145.2 289 36.7
Medtr2g086950 Medicago truncatula HOM05D007535 ORTHO05D008520 1.7e-32 145.2 264 38.3
Glyma.12G186700 Glycine max HOM05D007535 ORTHO05D008520 3.7e-32 144.1 265 39.2
Actinidia24230 Actinidia chinensis HOM05D007535 ORTHO05D008520 4.8e-32 143.7 141 59.6
CANSAT54G2250 Cannabis sativa HOM05D007535 ORTHO05D008520 6.3e-32 143.3 272 40.4
Glyma.13G314800 Glycine max HOM05D007535 ORTHO05D008520 6.3e-32 143.3 243 43.6
FvH4_3g25730 Fragaria vesca HOM05D007535 ORTHO05D008520 8.2e-32 142.9 263 42.6
Sed0017293 Sechium edule HOM05D007535 ORTHO05D008520 1.1e-31 142.5 276 37.0
FAN16G1906 Fragaria x ananassa HOM05D007535 ORTHO05D008520 1.4e-31 142.1 309 38.5
MD03G1150100 Malus domestica HOM05D007535 ORTHO05D008520 1.4e-31 142.1 302 36.4
FAN11G3206 Fragaria x ananassa HOM05D007535 ORTHO05D008520 7.0e-31 139.8 260 43.1
Nitab4.5_0000731g0020 Nicotiana tabacum HOM05D007535 ORTHO05D008520 1.6e-30 138.7 245 41.2
CsaV3_1G015090 Cucumis sativus L. HOM05D007535 ORTHO05D008520 7.7e-30 136.3 289 34.9
ECA238G4833 Erigeron canadensis HOM05D007535 ORTHO05D008520 2.2e-29 134.8 299 35.1
PSO339G0294 Papaver somniferum HOM05D007535 ORTHO05D008520 3.8e-29 134.0 323 35.3
VMungo1080G1542 Vigna mungo HOM05D007535 ORTHO05D008520 3.8e-29 134.0 361 33.2
FAN21G0330 Fragaria x ananassa HOM05D007535 ORTHO05D008520 8.5e-29 132.9 262 38.2
PGR119G1786 Punica granatum HOM05D007535 ORTHO05D008520 9.4e-28 129.4 249 39.8
Peaxi162Scf00224g00216 Petunia axillaris HOM05D007535 ORTHO05D008520 1.0e-26 125.9 283 36.0
Eucgr.J00525 Eucalyptus grandis HOM05D007535 ORTHO05D008520 5.2e-26 123.6 236 41.1
arahy.Tifrunner.gnm1.ann1.ETK20Z Arachis hypogaea HOM05D007535 ORTHO05D008520 1.5e-25 122.1 265 36.2
PSO384G1635 Papaver somniferum HOM05D007535 ORTHO05D008520 9.7e-25 119.4 325 33.5
unitig_27.g25117 Utricularia gibba HOM05D007535 ORTHO05D008520 9.7e-25 119.4 287 33.4
SGA_v2.0_scaffold177G39436 Striga asiatica HOM05D007535 ORTHO05D008520 2.2e-24 118.2 333 34.2
Ca_01647_v3 Cicer arietinum L. HOM05D002184 ORTHO05D002379 2.8e-24 117.9 268 36.6
Migut.N02473 Erythranthe guttata HOM05D007535 ORTHO05D008520 1.1e-23 115.9 239 37.2
TPR.G4567 Trifolium pratense HOM05D007535 ORTHO05D008520 5.3e-23 113.6 330 31.8
MBI17_g01489_MAGBIO Magnolia biondii HOM05D007535 ORTHO05D008520 1.2e-22 112.5 252 38.1
AUR62020256 Chenopodium quinoa HOM05D007535 ORTHO05D008520 2.9e-21 107.8 104 58.7
CAN.G745.17 Capsicum annuum HOM05D007535 ORTHO05D008520 3.8e-21 107.5 285 34.4
HanXRQChr14g0433121 Helianthus annuus HOM05D007535 ORTHO05D008520 9.4e-20 102.8 241 35.3
Phvul.005G122000 Phaseolus vulgaris HOM05D007535 ORTHO05D008520 1.8e-18 98.6 242 35.1
Haze_10732 Corylus avellana HOM05D021975 ORTHO05D024899 2.3e-18 98.2 96 51.0
Solyc11g068690.2 Solanum lycopersicum HOM05D007535 ORTHO05D008520 2.3e-18 98.2 120 51.7
Os01g0966400 Oryza sativa ssp. japonica HOM05D007535 ORTHO05D008520 2.0e-17 95.1 261 33.3
Sopen11g027410 Solanum pennellii HOM05D007535 ORTHO05D008520 2.0e-17 95.1 120 50.8
Lsat_1_v5_gn_2_34620 Lactuca sativa HOM05D007535 ORTHO05D008520 2.6e-17 94.7 298 29.9
MSTRG.12377 Avicennia marina HOM05D007535 ORTHO05D008520 9.8e-17 92.8 295 29.8
THA.LOC104810927 Tarenaya hassleriana HOM05D007535 ORTHO05D008520 1.3e-16 92.4 264 34.8
ATR0081G029 Amborella trichopoda HOM05D007535 ORTHO05D008520 1.7e-16 92.0 304 33.2
PGSC0003DMG400026347 Solanum tuberosum HOM05D007535 ORTHO05D008520 1.7e-16 92.0 203 36.5
Carub.0006s2006 Capsella rubella HOM05D012474 ORTHO05D008520 1.1e-15 89.4 253 32.8
Aa31LG1G13230 Aethionema arabicum HOM05D012474 ORTHO05D008520 5.9e-14 83.6 242 29.8
CARHR191220 Cardamine hirsuta HOM05D012474 ORTHO05D008520 1.3e-13 82.4 253 33.2
CDE02G4009 Ceratophyllum demersum HOM05D007535 ORTHO05D008520 8.6e-13 79.7 264 30.3
SalBow3G0383 Salvia bowleyana HOM05D007535 ORTHO05D008520 1.9e-12 78.6 265 31.7
Haze_17300 Corylus avellana HOM05D021975 ORTHO05D024899 7.2e-12 76.6 95 42.1
Haze_04625 Corylus avellana HOM05D017004 ORTHO05D018938 1.2e-11 75.9 87 50.6
Zm00001eb140080 Zea mays HOM05D007535 ORTHO05D008520 3.6e-11 74.3 259 30.9
Haze_03552 Corylus avellana HOM05D001545 ORTHO05D001600 8.0e-11 73.2 123 41.5
C09p54250 Brassica napus HOM05D012474 ORTHO05D008520 4.0e-10 70.9 252 30.2
BolC9t58300H Brassica oleracea HOM05D012474 ORTHO05D008520 4.0e-10 70.9 250 30.8
PRCOL_00004573 Prasinoderma coloniale HOM05D007535 ORTHO05D008520 5.2e-10 70.5 97 39.2
COL.COLO4_22633 Corchorus olitorius HOM05D007535 ORTHO05D008520 6.8e-10 70.1 182 35.2
AL6G33340 Arabidopsis lyrata HOM05D012474 ORTHO05D008520 1.3e-08 65.9 255 28.2
BcaB08g36440 Brassica carinata HOM05D012474 ORTHO05D008520 1.7e-08 65.5 230 30.4
FAN25G1573 Fragaria x ananassa HOM05D007535 ORTHO05D008520 1.7e-08 65.5 45 73.3
Oeu024409.1 Olea europaea HOM05D007535 ORTHO05D008520 2.8e-08 64.7 45 68.9
Mapoly0097s0057 Marchantia polymorpha HOM05D022173 ORTHO05D008520 3.7e-08 64.3 249 27.7
Sp6g22920 Schrenkiella parvula HOM05D012474 ORTHO05D008520 3.7e-08 64.3 248 29.4
Thhalv10013516m.g Eutrema salsugineum HOM05D012474 ORTHO05D008520 6.3e-08 63.5 242 32.2
MD11G1169000 Malus domestica HOM05D007535 ORTHO05D008520 2.4e-07 61.6 158 36.7
MD11G1168900 Malus domestica HOM05D007535 ORTHO05D008520 3.1e-07 61.2 141 35.5
QL01p039683 Quercus lobata HOM05D036707 ORTHO05D012891 5.4e-07 60.5 96 37.5
CANSAT78G2361 Cannabis sativa HOM05D000107 ORTHO05D000062 7.0e-07 60.1 44 65.9
Nitab4.5_0001640g0010 Nicotiana tabacum HOM05D007535 ORTHO05D008520 9.2e-07 59.7 242 28.1
Haze_10827 Corylus avellana HOM05D003983 ORTHO05D004562 1.6e-06 58.9 111 36.0
BcaC04g19565 Brassica carinata HOM05D012474 ORTHO05D008520 2.0e-06 58.5 248 28.2
QL05p039589 Quercus lobata HOM05D000003 ORTHO05D000004 2.0e-06 58.5 86 34.9
Oeu047754.1 Olea europaea HOM05D000113 ORTHO05D010194 3.5e-06 57.8 113 26.5
Hma1.2p1_2164F.1_g315720 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 4.5e-06 57.4 45 62.2
Haze_16181 Corylus avellana HOM05D063703 ORTHO05D034101 7.8e-06 56.6 114 36.8


User provided reference genes

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