Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_23272 Corylus avellana HOM05D004500 ORTHO05D005775 9.4e-248 859.8 441 100.0
Cfa009915 Carpinus fangiana HOM05D004500 ORTHO05D005775 1.2e-215 753.1 456 88.2
CiPaw.13G147900 Carya illinoinensis HOM05D004500 ORTHO05D005775 7.4e-184 647.5 457 77.5
QL01p016442 Quercus lobata HOM05D004500 ORTHO05D005775 1.6e-178 629.8 455 74.7
Duzib168G0672 Durio zibethinus HOM05D004500 ORTHO05D005775 1.3e-169 600.1 456 70.6
Manes.02G138300 Manihot esculenta HOM05D004500 ORTHO05D005775 6.7e-169 597.8 457 70.7
GSVIVG01037358001 Vitis vinifera HOM05D004500 ORTHO05D005775 8.7e-169 597.4 457 70.9
Dinv22199 Davidia involucrata HOM05D004500 ORTHO05D005775 7.4e-168 594.3 457 72.4
TPR.G16395 Trifolium pratense HOM05D004500 ORTHO05D005775 2.8e-167 592.4 458 69.9
Ca_06188_v3 Cicer arietinum L. HOM05D004500 ORTHO05D005775 6.3e-167 591.3 458 70.3
COL.COLO4_06618 Corchorus olitorius HOM05D004500 ORTHO05D005775 2.4e-166 589.3 457 68.9
Psat0s2305g0080 Pisum sativum HOM05D004500 ORTHO05D005775 3.1e-166 589.0 459 69.9
VMungo0647G1179 Vigna mungo HOM05D004500 ORTHO05D005775 5.3e-166 588.2 457 69.1
Medtr5g089000 Medicago truncatula HOM05D004500 ORTHO05D005775 1.5e-165 586.6 460 69.6
Rhsim13G0205000 Rhododendron simsii HOM05D004500 ORTHO05D005775 1.5e-165 586.6 460 68.7
Gorai.006G122400 Gossypium raimondii HOM05D004500 ORTHO05D005775 2.0e-165 586.3 452 69.0
Glyma.14G036800 Glycine max HOM05D004500 ORTHO05D005775 1.3e-164 583.6 457 68.9
Gohir.D09G105200 Gossypium hirsutum HOM05D004500 ORTHO05D005775 2.2e-164 582.8 452 68.6
MD03G1157000 Malus domestica HOM05D004500 ORTHO05D005775 2.2e-164 582.8 456 68.9
Phvul.008G203200 Phaseolus vulgaris HOM05D004500 ORTHO05D005775 1.4e-163 580.1 457 68.3
CANSAT54G2073 Cannabis sativa HOM05D004500 ORTHO05D005775 2.5e-163 579.3 442 69.2
Potri.001G274500 Populus trichocarpa HOM05D004500 ORTHO05D005775 5.5e-163 578.2 457 68.3
Prupe.4G270300 Prunus persica HOM05D004500 ORTHO05D005775 2.7e-162 575.9 457 68.7
TWI75G0701 Tripterygium wilfordii HOM05D004500 ORTHO05D005775 2.7e-162 575.9 457 68.5
Actinidia06989 Actinidia chinensis HOM05D004500 ORTHO05D005775 6.1e-162 574.7 457 68.3
arahy.Tifrunner.gnm1.ann1.G3VBDM Arachis hypogaea HOM05D004500 ORTHO05D005775 1.8e-161 573.2 456 68.0
Lalb_Chr10g0106121 Lupinus albus HOM05D004500 ORTHO05D005775 1.8e-161 573.2 459 68.2
TAR623G1318 Trochodendron aralioides HOM05D004500 ORTHO05D005775 3.9e-161 572.0 450 68.9
RcHm_v2.0_Chr5g0051931 Rosa chinensis HOM05D004500 ORTHO05D005775 6.3e-159 564.7 456 67.1
ECA233G3879 Erigeron canadensis HOM05D004500 ORTHO05D005775 5.3e-158 561.6 442 66.7
CSS0026558 Camellia sinensis var. sinensis HOM05D004500 ORTHO05D005775 1.2e-157 560.5 456 66.9
HanXRQChr12g0380331 Helianthus annuus HOM05D004500 ORTHO05D005775 2.6e-157 559.3 452 65.5
arahy.Tifrunner.gnm1.ann1.VEQ9JC Arachis hypogaea HOM05D004500 ORTHO05D005775 5.9e-157 558.1 455 67.3
Lsat_1_v5_gn_5_70881 Lactuca sativa HOM05D004500 ORTHO05D005775 1.0e-156 557.4 457 65.6
FAN21G1747 Fragaria x ananassa HOM05D004500 ORTHO05D005775 1.3e-156 557.0 456 67.5
Ciclev10014018m.g Citrus clementina HOM05D004500 ORTHO05D005775 2.2e-156 556.2 457 66.5
Eucgr.J00673 Eucalyptus grandis HOM05D004500 ORTHO05D005775 2.2e-156 556.2 457 64.6
LjContig00564g0025272 Lotus japonicus HOM05D004500 ORTHO05D005775 3.8e-156 555.4 449 67.7
FvH4_3g28920 Fragaria vesca HOM05D004500 ORTHO05D005775 1.4e-155 553.5 456 66.9
FAN25G3650 Fragaria x ananassa HOM05D004500 ORTHO05D005775 1.4e-155 553.5 456 67.3
CsaV3_6G038790 Cucumis sativus L. HOM05D004500 ORTHO05D005775 1.9e-155 553.1 457 66.3
MBI19_g07497_MAGBIO Magnolia biondii HOM05D004500 ORTHO05D005775 2.1e-154 549.7 457 65.9
RcHm_v2.0_Chr5g0051871 Rosa chinensis HOM05D004500 ORTHO05D005775 2.1e-154 549.7 456 66.7
MELO3C014542.2 Cucumis melo HOM05D004500 ORTHO05D005775 2.7e-154 549.3 457 66.3
Thhalv10011180m.g Eutrema salsugineum HOM05D004500 ORTHO05D005775 1.1e-152 543.9 455 64.2
Sabra16G0169000 Salix brachista HOM05D004500 ORTHO05D005775 1.1e-152 543.9 461 63.6
Carub.0004s0721 Capsella rubella HOM05D004500 ORTHO05D005775 2.2e-151 539.7 455 64.6
Atru.chr3.2856 Acer truncatum HOM05D004500 ORTHO05D005775 4.8e-151 538.5 482 62.4
ClCG02G022670 Citrullus lanatus HOM05D004500 ORTHO05D005775 8.2e-151 537.7 470 64.5
THA.LOC104800461 Tarenaya hassleriana HOM05D004500 ORTHO05D005775 8.2e-151 537.7 457 63.0
AT2G26780 Arabidopsis thaliana HOM05D004500 ORTHO05D005775 1.1e-150 537.3 457 64.6
Nn7g36895 Nelumbo nucifera HOM05D004500 ORTHO05D005775 1.8e-150 536.6 442 65.8
Aqoxy1G00409 Aquilegia oxysepala HOM05D004500 ORTHO05D005775 3.1e-150 535.8 461 63.8
Sed0001243 Sechium edule HOM05D004500 ORTHO05D005775 3.1e-150 535.8 443 65.2
Oeu061692.5 Olea europaea HOM05D004500 ORTHO05D005775 1.2e-149 533.9 458 62.7
AL4G19970 Arabidopsis lyrata HOM05D004500 ORTHO05D005775 1.5e-149 533.5 457 64.1
Atru.chr3.2854 Acer truncatum HOM05D004500 ORTHO05D005775 2.0e-149 533.1 482 61.8
BcaB04g17016 Brassica carinata HOM05D004500 ORTHO05D005775 5.0e-148 528.5 456 63.2
Sp1g40640 Schrenkiella parvula HOM05D004500 ORTHO05D005775 1.9e-147 526.6 457 62.6
Sopen11g024300 Solanum pennellii HOM05D004500 ORTHO05D005775 2.1e-146 523.1 462 61.5
A08p01100 Brassica napus HOM05D004500 ORTHO05D005775 3.6e-146 522.3 462 61.9
CARHR118960 Cardamine hirsuta HOM05D004500 ORTHO05D005775 4.7e-146 521.9 455 63.3
Sc09g0001130 Simmondsia chinensis HOM05D004500 ORTHO05D005775 8.0e-146 521.2 457 63.0
Aa31LG5G9010 Aethionema arabicum HOM05D004500 ORTHO05D005775 1.4e-145 520.4 460 62.2
BraA08t32166Z Brassica rapa HOM05D004500 ORTHO05D005775 3.0e-145 519.2 462 62.1
Migut.D00681 Erythranthe guttata HOM05D004500 ORTHO05D005775 3.9e-145 518.8 464 60.1
FAN11G1622 Fragaria x ananassa HOM05D004500 ORTHO05D005775 2.0e-144 516.5 480 61.9
BolC3t21527H Brassica oleracea HOM05D004500 ORTHO05D005775 4.4e-144 515.4 455 62.2
C03p92100 Brassica napus HOM05D004500 ORTHO05D005775 1.7e-143 513.5 455 62.2
CAN.G1050.5 Capsicum annuum HOM05D004500 ORTHO05D005775 3.1e-142 509.2 458 60.9
EL10Ac4g10085 Beta vulgaris HOM05D004500 ORTHO05D005775 4.5e-141 505.4 451 60.1
SalBow6G2693 Salvia bowleyana HOM05D004500 ORTHO05D005775 7.7e-141 504.6 462 58.9
AUR62000221 Chenopodium quinoa HOM05D004500 ORTHO05D005775 2.9e-140 502.7 463 59.0
AUR62006566 Chenopodium quinoa HOM05D004500 ORTHO05D005775 3.8e-140 502.3 461 59.0
Hund07422 Selenicereus undatus HOM05D004500 ORTHO05D005775 8.5e-140 501.1 457 59.3
MSTRG.21337 Avicennia marina HOM05D004500 ORTHO05D005775 2.5e-139 499.6 462 56.5
Zm00001eb196280 Zea mays HOM05D004500 ORTHO05D005775 1.0e-137 494.2 457 57.5
SGA_v2.0_scaffold29G12209 Striga asiatica HOM05D004500 ORTHO05D005775 7.5e-136 488.0 461 57.5
Os11g0137300 Oryza sativa ssp. japonica HOM05D004500 ORTHO05D005775 1.3e-135 487.3 457 57.3
Cc01_g06520 Coffea canephora HOM05D004500 ORTHO05D005775 5.3e-134 481.9 483 56.3
ATR0307G114 Amborella trichopoda HOM05D004500 ORTHO05D005775 5.2e-129 465.3 447 58.4
Nitab4.5_0000492g0190 Nicotiana tabacum HOM05D004500 ORTHO05D005775 2.0e-128 463.4 455 57.1
SEGI_37322 Sequoiadendron giganteum HOM05D004500 ORTHO05D005775 8.6e-116 421.4 441 53.3
FAN21G2043 Fragaria x ananassa HOM05D004500 ORTHO05D005775 3.0e-108 396.4 368 62.0
Os12g0148400 Oryza sativa ssp. japonica HOM05D004500 ORTHO05D005775 3.4e-104 382.9 457 48.1
AagrBONN_evm.TU.Sc2ySwM_117.694 Anthoceros agrestis HOM05D004500 ORTHO05D005775 5.2e-97 359.0 460 46.3
HPP92_022829 Vanilla planifolia HOM05D004500 ORTHO05D005775 2.2e-95 353.6 342 55.6
Pp3c1_28010 Physcomitrium patens HOM05D004500 ORTHO05D005775 4.0e-89 332.8 446 44.2
Mapoly0009s0155 Marchantia polymorpha HOM05D004500 ORTHO05D005775 7.6e-88 328.6 442 43.4
Peaxi162Scf00029g02523 Petunia axillaris HOM05D004500 ORTHO05D005775 1.6e-85 320.9 292 59.2
Nitab4.5_0002026g0160 Nicotiana tabacum HOM05D004500 ORTHO05D005775 2.8e-82 310.1 300 56.7
Solyc11g062320.2 Solanum lycopersicum HOM05D004500 ORTHO05D005775 8.1e-82 308.5 299 56.9
SMO228G0054 Selaginella moellendorffii HOM05D004500 ORTHO05D005775 1.9e-78 297.4 473 39.7
CDE02G1339 Ceratophyllum demersum HOM05D004500 ORTHO05D005775 2.4e-73 280.4 436 41.5
Hma1.2p1_0460F.1_g157660 Hydrangea macrophylla HOM05D004500 ORTHO05D005775 2.1e-66 257.3 191 72.8
CBR_g37490 Chara braunii HOM05D004500 ORTHO05D005775 5.3e-65 252.7 465 36.6
Solyc11g062310.2 Solanum lycopersicum HOM05D004500 ORTHO05D005775 6.5e-55 219.2 168 68.5
Lj1C1068G17 Lonicera japonica HOM05D004500 ORTHO05D009839 8.4e-55 218.8 338 43.5
Gohir.A09G108566 Gossypium hirsutum HOM05D004500 ORTHO05D005775 1.8e-52 211.1 162 67.3
unitig_578.g16660 Utricularia gibba HOM05D004500 ORTHO05D005775 4.3e-51 206.5 452 37.2
PSO339G3895 Papaver somniferum HOM05D004500 ORTHO05D005775 2.2e-47 194.1 140 72.1
Peaxi162Scf00029g02524 Petunia axillaris HOM05D004500 ORTHO05D005775 5.5e-46 189.5 140 72.1
PRCOL_00001646 Prasinoderma coloniale HOM05D004500 ORTHO05D005775 5.1e-44 183.0 513 29.8
EL10Ac5g11937 Beta vulgaris HOM05D004500 ORTHO05D005775 6.7e-44 182.6 196 52.6
Gohir.A09G108500 Gossypium hirsutum HOM05D004500 ORTHO05D005775 6.7e-44 182.6 120 76.7
BcaC01g01445 Brassica carinata HOM05D004500 ORTHO05D005775 5.7e-43 179.5 151 66.2
Cre04.g217935 Chlamydomonas reinhardtii HOM05D004500 ORTHO05D005775 1.3e-42 178.3 583 28.6
vmacro04083 Vaccinium macrocarpon HOM05D004500 ORTHO05D005775 2.2e-42 177.6 163 63.8
SEGI_21027 Sequoiadendron giganteum HOM05D004500 ORTHO05D005775 4.8e-42 176.4 205 48.8
MCO04G062 Micromonas commoda HOM05D004500 ORTHO05D005775 1.4e-38 164.9 477 28.3
Thhalv10012226m.g Eutrema salsugineum HOM05D004500 ORTHO05D005775 1.6e-37 161.4 326 38.7
PSO339G2400 Papaver somniferum HOM05D004500 ORTHO05D005775 3.0e-36 157.1 285 40.4
Lj1A1068G47 Lonicera japonica HOM05D004500 ORTHO05D005775 5.7e-27 126.3 78 82.1
SEGI_00784 Sequoiadendron giganteum HOM05D004500 ORTHO05D005775 1.8e-17 94.7 77 55.8
EL10Ac5g12062 Beta vulgaris HOM05D004500 ORTHO05D005775 2.3e-12 77.8 60 60.0
MD12G1083300 Malus domestica HOM05D004500 ORTHO05D005775 5.7e-11 73.2 68 67.6
HPP92_022828 Vanilla planifolia HOM05D004500 ORTHO05D005775 5.7e-11 73.2 83 53.0
SEGI_07125 Sequoiadendron giganteum HOM05D004500 ORTHO05D005775 1.4e-09 68.6 111 40.5


User provided reference genes

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