Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_23255 Corylus avellana HOM05D005005 ORTHO05D006178 2.4e-228 795.0 376 100.0
Cfa009893 Carpinus fangiana HOM05D005005 ORTHO05D006178 2.0e-198 695.7 423 80.1
QL01p016772 Quercus lobata HOM05D005005 ORTHO05D006178 2.8e-147 525.8 421 64.1
Atru.chr3.3001 Acer truncatum HOM05D005005 ORTHO05D006178 2.1e-139 499.6 421 60.6
CiPaw.14G111500 Carya illinoinensis HOM05D005005 ORTHO05D006178 6.4e-136 488.0 426 60.3
Eucgr.J00681 Eucalyptus grandis HOM05D005005 ORTHO05D006178 1.4e-130 470.3 421 57.2
Nn7g36763 Nelumbo nucifera HOM05D005005 ORTHO05D006178 1.3e-128 463.8 421 57.2
CANSAT54G2608 Cannabis sativa HOM05D005005 ORTHO05D006178 3.9e-125 452.2 421 56.5
TAR633G0536 Trochodendron aralioides HOM05D005005 ORTHO05D006178 2.1e-123 446.4 421 56.8
MBI19_g20792_MAGBIO Magnolia biondii HOM05D005005 ORTHO05D006178 4.4e-121 438.7 430 54.2
Aqoxy2G00413 Aquilegia oxysepala HOM05D005005 ORTHO05D006178 6.2e-115 418.3 417 53.2
PGR119G1568 Punica granatum HOM05D005005 ORTHO05D006178 6.8e-114 414.8 425 52.5
GSVIVG01037328001 Vitis vinifera HOM05D005005 ORTHO05D006178 6.8e-114 414.8 423 54.4
PSO339G0382 Papaver somniferum HOM05D005005 ORTHO05D006178 7.8e-110 401.4 435 52.0
PSO384G4770 Papaver somniferum HOM05D005005 ORTHO05D006178 5.1e-109 398.7 439 51.3
GSVIVG01036640001 Vitis vinifera HOM05D005005 ORTHO05D006178 1.1e-108 397.5 420 51.2
MD07G1045900 Malus domestica HOM05D005005 ORTHO05D006178 1.9e-108 396.7 422 51.2
RcHm_v2.0_Chr1g0326491 Rosa chinensis HOM05D005005 ORTHO05D006178 2.5e-108 396.4 423 51.1
Dinv32010 Davidia involucrata HOM05D005005 ORTHO05D006178 3.3e-108 396.0 420 52.6
MD02G1278000 Malus domestica HOM05D005005 ORTHO05D006178 5.6e-108 395.2 422 50.2
Prupe.2G042700 Prunus persica HOM05D005005 ORTHO05D006178 7.3e-108 394.8 420 50.5
FAN10G2457 Fragaria x ananassa HOM05D005005 ORTHO05D006178 6.2e-107 391.7 423 50.6
Hma1.2p1_1796F.1_g302710 Hydrangea macrophylla HOM05D005005 ORTHO05D006178 1.1e-106 391.0 419 50.4
FvH4_7g03700 Fragaria vesca HOM05D005005 ORTHO05D006178 3.1e-106 389.4 423 50.4
Manes.04G156500 Manihot esculenta HOM05D005005 ORTHO05D006178 3.1e-106 389.4 419 50.8
FAN01G1292 Fragaria x ananassa HOM05D005005 ORTHO05D006178 1.2e-105 387.5 423 50.4
FAN06G0520 Fragaria x ananassa HOM05D005005 ORTHO05D006178 2.0e-105 386.7 433 49.4
CSS0003849 Camellia sinensis var. sinensis HOM05D005005 ORTHO05D006178 1.1e-103 380.9 420 50.0
Cpa.g.sc169.39 Carica papaya HOM05D005005 ORTHO05D006178 1.4e-103 380.6 390 51.3
Haze_02996 Corylus avellana HOM05D005005 ORTHO05D006178 2.4e-103 379.8 443 48.1
Glyma.13G192200 Glycine max HOM05D005005 ORTHO05D006178 3.2e-103 379.4 420 49.3
Manes.11G007250 Manihot esculenta HOM05D005005 ORTHO05D006178 3.2e-103 379.4 419 50.1
Glyma.15G230500 Glycine max HOM05D005005 ORTHO05D006178 9.3e-103 377.9 420 49.0
Potri.001G030900 Populus trichocarpa HOM05D005005 ORTHO05D006178 9.3e-103 377.9 419 50.4
Actinidia06222 Actinidia chinensis HOM05D005005 ORTHO05D006178 1.2e-102 377.5 421 49.9
QL04p021121 Quercus lobata HOM05D005005 ORTHO05D006178 1.2e-102 377.5 419 49.4
QL93p0049_0022 Quercus lobata HOM05D005005 ORTHO05D006178 1.2e-102 377.5 419 49.4
Phvul.011G201500 Phaseolus vulgaris HOM05D005005 ORTHO05D006178 2.7e-102 376.3 420 48.8
Cfa010948 Carpinus fangiana HOM05D005005 ORTHO05D006178 3.5e-102 375.9 433 48.7
COL.COLO4_20731 Corchorus olitorius HOM05D005005 ORTHO05D006178 3.5e-102 375.9 415 49.2
Duzib128G0392 Durio zibethinus HOM05D005005 ORTHO05D006178 3.5e-102 375.9 415 48.9
ClCG08G010820 Citrullus lanatus HOM05D005005 ORTHO05D006178 1.0e-101 374.4 420 48.3
Actinidia07969 Actinidia chinensis HOM05D005005 ORTHO05D006178 1.3e-101 374.0 420 49.3
TWI63G1294 Tripterygium wilfordii HOM05D005005 ORTHO05D006178 1.7e-101 373.6 421 49.9
ClCG08G002660 Citrullus lanatus HOM05D005005 ORTHO05D006178 3.0e-101 372.9 420 48.1
Thecc.10G142900 Theobroma cacao HOM05D005005 ORTHO05D006178 3.9e-101 372.5 415 48.4
ATR1096G052 Amborella trichopoda HOM05D005005 ORTHO05D006178 1.5e-100 370.5 438 47.0
Gorai.011G220200 Gossypium raimondii HOM05D005005 ORTHO05D006178 2.5e-100 369.8 415 48.7
Gohir.D10G197000 Gossypium hirsutum HOM05D005005 ORTHO05D006178 3.3e-100 369.4 415 48.7
Cc09_g07690 Coffea canephora HOM05D005005 ORTHO05D006178 9.6e-100 367.9 416 49.0
Lj7A493G34 Lonicera japonica HOM05D005005 ORTHO05D006178 9.6e-100 367.9 430 50.0
arahy.Tifrunner.gnm1.ann1.HP7LLE Arachis hypogaea HOM05D005005 ORTHO05D006178 2.8e-99 366.3 423 48.5
Gohir.A10G189100 Gossypium hirsutum HOM05D005005 ORTHO05D006178 6.2e-99 365.2 415 48.2
vmacro13768 Vaccinium macrocarpon HOM05D005005 ORTHO05D006178 1.4e-98 364.0 427 48.7
CiPaw.14G009200 Carya illinoinensis HOM05D005005 ORTHO05D006178 1.8e-98 363.6 423 48.5
MELO3C011380.2 Cucumis melo HOM05D005005 ORTHO05D006178 1.8e-98 363.6 420 47.4
Lalb_Chr19g0132951 Lupinus albus HOM05D005005 ORTHO05D006178 1.8e-98 363.6 422 48.6
Sed0024277 Sechium edule HOM05D005005 ORTHO05D006178 1.8e-98 363.6 419 47.7
CsaV3_6G035720 Cucumis sativus L. HOM05D005005 ORTHO05D006178 3.1e-98 362.8 420 47.4
TWI38G1285 Tripterygium wilfordii HOM05D005005 ORTHO05D006178 3.1e-98 362.8 419 48.7
Lj3g0014782 Lotus japonicus HOM05D005005 ORTHO05D006178 5.3e-98 362.1 423 47.5
Gohir.A06G174600 Gossypium hirsutum HOM05D005005 ORTHO05D006178 6.9e-98 361.7 415 47.5
TPR.G8528 Trifolium pratense HOM05D005005 ORTHO05D006178 6.9e-98 361.7 423 47.3
Gohir.D06G184600 Gossypium hirsutum HOM05D005005 ORTHO05D006178 9.0e-98 361.3 415 47.0
Oeu013069.1 Olea europaea HOM05D005005 ORTHO05D006178 1.5e-97 360.5 422 47.9
Gorai.010G215900 Gossypium raimondii HOM05D005005 ORTHO05D006178 2.6e-97 359.8 415 46.7
Hund21969 Selenicereus undatus HOM05D005005 ORTHO05D006178 3.4e-97 359.4 367 51.8
FAN03G0125 Fragaria x ananassa HOM05D005005 ORTHO05D006178 9.9e-97 357.8 491 42.8
Lalb_Chr03g0032191 Lupinus albus HOM05D005005 ORTHO05D006178 1.3e-96 357.5 422 48.3
VMungo1127G1151 Vigna mungo HOM05D005005 ORTHO05D006178 6.4e-96 355.1 421 46.8
Potri.003G194300 Populus trichocarpa HOM05D005005 ORTHO05D006178 1.1e-95 354.4 419 48.4
Sc06g0004720 Simmondsia chinensis HOM05D005005 ORTHO05D006178 1.4e-95 354.0 378 51.6
Os01g0280000 Oryza sativa ssp. japonica HOM05D005005 ORTHO05D006178 5.5e-95 352.1 424 46.9
Nitab4.5_0002838g0130 Nicotiana tabacum HOM05D005005 ORTHO05D006178 9.3e-95 351.3 426 47.9
Rhsim07G0069000 Rhododendron simsii HOM05D005005 ORTHO05D006178 9.3e-95 351.3 422 47.6
arahy.Tifrunner.gnm1.ann1.1L47SY Arachis hypogaea HOM05D005005 ORTHO05D006178 1.2e-94 350.9 460 44.3
Oeu014630.2 Olea europaea HOM05D005005 ORTHO05D006178 1.2e-94 350.9 425 46.6
CDE04G1798 Ceratophyllum demersum HOM05D005005 ORTHO05D006178 2.1e-94 350.1 420 46.4
Duzib106G1278 Durio zibethinus HOM05D005005 ORTHO05D006178 3.5e-94 349.4 415 47.0
Sabra03G0145000 Salix brachista HOM05D005005 ORTHO05D006178 1.3e-93 347.4 456 45.4
Zm00001eb129080 Zea mays HOM05D005005 ORTHO05D006178 3.0e-93 346.3 440 44.8
AUR62006554 Chenopodium quinoa HOM05D005005 ORTHO05D006178 3.9e-93 345.9 431 45.9
Sabra01G0022200 Salix brachista HOM05D005005 ORTHO05D006178 5.1e-93 345.5 472 43.4
Ca_23977_v3 Cicer arietinum L. HOM05D005005 ORTHO05D006178 8.7e-93 344.7 383 47.5
Hund07434 Selenicereus undatus HOM05D005005 ORTHO05D006178 1.9e-92 343.6 429 46.2
AUR62000208 Chenopodium quinoa HOM05D005005 ORTHO05D006178 3.3e-92 342.8 439 44.9
Peaxi162Scf00220g00417 Petunia axillaris HOM05D005005 ORTHO05D006178 5.6e-92 342.0 423 47.0
Solyc01g096570.3 Solanum lycopersicum HOM05D005005 ORTHO05D006178 5.6e-92 342.0 423 46.8
Sopen01g040300 Solanum pennellii HOM05D005005 ORTHO05D006178 2.8e-91 339.7 423 47.0
PGSC0003DMG403003285 Solanum tuberosum HOM05D005005 ORTHO05D006178 1.1e-90 337.8 426 46.2
CAN.G134.16 Capsicum annuum HOM05D005005 ORTHO05D006178 1.4e-90 337.4 426 46.7
Ah.06g194700 Amaranthus hybridus HOM05D005152 ORTHO05D006178 6.9e-90 335.1 425 47.3
MSTRG.20501 Avicennia marina HOM05D005005 ORTHO05D006178 2.6e-89 333.2 432 43.5
ECA248G3166 Erigeron canadensis HOM05D005005 ORTHO05D006178 1.7e-88 330.5 415 46.5
THA.LOC104826755 Tarenaya hassleriana HOM05D005005 ORTHO05D006178 1.7e-88 330.5 423 44.4
SalBow6G1292 Salvia bowleyana HOM05D005005 ORTHO05D006178 2.9e-88 329.7 398 46.0
SalBow6G1153 Salvia bowleyana HOM05D005005 ORTHO05D006178 3.8e-88 329.3 398 46.0
EL10Ac4g10102 Beta vulgaris HOM05D005005 ORTHO05D006178 8.4e-88 328.2 432 44.0
DCAR_025325 Daucus carota HOM05D005005 ORTHO05D006178 8.4e-88 328.2 427 45.4
Lsat_1_v5_gn_1_117920 Lactuca sativa HOM05D005005 ORTHO05D006178 8.4e-88 328.2 346 52.0
HPP92_021193 Vanilla planifolia HOM05D005005 ORTHO05D006178 6.0e-86 322.0 357 49.0
CDE07G1185 Ceratophyllum demersum HOM05D005005 ORTHO05D006178 1.3e-85 320.9 422 44.3
PGR031G0380 Punica granatum HOM05D005005 ORTHO05D006178 8.7e-85 318.2 389 45.8
THA.LOC104799326 Tarenaya hassleriana HOM05D005005 ORTHO05D006178 3.3e-84 316.2 350 50.3
Aqoxy1G00392 Aquilegia oxysepala HOM05D005005 ORTHO05D006178 2.8e-83 313.2 375 48.3
Migut.N01858 Erythranthe guttata HOM05D005005 ORTHO05D006178 4.8e-83 312.4 423 44.2
MSTRG.5076 Avicennia marina HOM05D005005 ORTHO05D006178 8.2e-83 311.6 373 47.2
HanXRQChr11g0341211 Helianthus annuus HOM05D005005 ORTHO05D006178 2.0e-81 307.0 327 50.8
HanXRQChr01g0003701 Helianthus annuus HOM05D005005 ORTHO05D006178 4.5e-81 305.8 363 49.0
unitig_61.g26369 Utricularia gibba HOM05D005005 ORTHO05D006178 6.5e-80 302.0 362 46.7
Psat4g145120 Pisum sativum HOM05D005005 ORTHO05D006178 8.4e-80 301.6 292 54.1
Migut.B01249 Erythranthe guttata HOM05D005005 ORTHO05D006178 3.5e-78 296.2 417 42.4
Ciclev10001735m.g Citrus clementina HOM05D005005 ORTHO05D006178 4.6e-78 295.8 335 50.7
Eucgr.G03212 Eucalyptus grandis HOM05D005005 ORTHO05D006178 4.8e-75 285.8 404 43.3
Psat0s3527g0040 Pisum sativum HOM05D005005 ORTHO05D006178 6.3e-75 285.4 324 49.1
SEGI_32986 Sequoiadendron giganteum HOM05D005005 ORTHO05D006178 8.5e-72 275.0 414 38.6
Ciclev10027284m.g Citrus clementina HOM05D005005 ORTHO05D006178 3.0e-69 266.5 330 44.2
SalBow5G3115 Salvia bowleyana HOM05D005005 ORTHO05D006178 1.5e-65 254.2 415 37.8
Ciclev10027488m.g Citrus clementina HOM05D005005 ORTHO05D006178 2.0e-57 227.3 280 45.7
Ciclev10027071m.g Citrus clementina HOM05D005005 ORTHO05D006178 3.8e-56 223.0 280 45.4
SalBow6G0970 Salvia bowleyana HOM05D005005 ORTHO05D006178 1.0e-53 214.9 191 56.0
Ciclev10027527m.g Citrus clementina HOM05D005005 ORTHO05D006178 6.7e-53 212.2 275 45.5
SMO367G0260 Selaginella moellendorffii HOM05D005005 ORTHO05D006178 4.4e-52 209.5 287 40.8
SGA_v2.0_scaffold232G43481 Striga asiatica HOM05D005005 ORTHO05D006178 6.3e-51 205.7 268 43.3
CDE04G0220 Ceratophyllum demersum HOM05D005005 ORTHO05D006178 6.8e-45 185.7 250 40.8
Nitab4.5_0004168g0100 Nicotiana tabacum HOM05D005005 ORTHO05D006178 1.3e-43 181.4 194 51.5
Os01g0618000 Oryza sativa ssp. japonica HOM05D005005 ORTHO05D006178 2.8e-43 180.3 289 37.0
Psat2g140280 Pisum sativum HOM05D005005 ORTHO05D006178 5.4e-42 176.0 160 56.2
Psat7g158320 Pisum sativum HOM05D005005 ORTHO05D006178 5.0e-40 169.5 160 54.4
Psat1g148000 Pisum sativum HOM05D005005 ORTHO05D004359 1.5e-39 167.9 150 58.0
Psat7g158200 Pisum sativum HOM05D005005 ORTHO05D006178 2.7e-38 163.7 133 60.9
CBR_g41532 Chara braunii HOM05D005005 ORTHO05D006178 1.8e-37 161.0 212 41.0
Oeu013075.1 Olea europaea HOM05D005005 ORTHO05D006178 1.8e-37 161.0 201 44.8
Psat1g148040 Pisum sativum HOM05D005005 ORTHO05D006178 8.8e-37 158.7 150 56.7
CDE02G0295 Ceratophyllum demersum HOM05D005005 ORTHO05D006178 5.4e-34 149.4 179 46.9
Psat4g190960 Pisum sativum HOM05D005005 ORTHO05D006178 3.6e-30 136.7 166 45.2
TAR636G3532 Trochodendron aralioides HOM05D005005 ORTHO05D006178 1.0e-29 135.2 172 44.2
Os11g0525900 Oryza sativa ssp. japonica HOM05D005005 ORTHO05D006178 1.8e-29 134.4 268 32.1
QL01p016028 Quercus lobata HOM05D005005 ORTHO05D006178 3.2e-26 123.6 80 70.0
Ciclev10027126m.g Citrus clementina HOM05D005005 ORTHO05D006178 8.6e-24 115.5 149 42.3
Cre01.g033950 Chlamydomonas reinhardtii HOM05D005005 ORTHO05D006178 1.8e-21 107.8 224 32.1
CDE09G0004 Ceratophyllum demersum HOM05D005005 ORTHO05D006178 1.2e-17 95.1 106 47.2
CDE02G2432 Ceratophyllum demersum HOM05D005005 ORTHO05D006178 4.6e-17 93.2 63 65.1
CDE09G0976 Ceratophyllum demersum HOM05D005005 ORTHO05D006178 9.8e-12 75.5 120 39.2
CDE02G4802 Ceratophyllum demersum HOM05D005005 ORTHO05D006178 6.4e-11 72.8 106 34.9
PRCOL_00004087 Prasinoderma coloniale HOM05D000406 ORTHO05D003425 6.4e-11 72.8 202 30.2
CDE02G3379 Ceratophyllum demersum HOM05D005005 ORTHO05D002498 1.0e-08 65.5 42 64.3
Psat2g140320 Pisum sativum HOM05D005005 ORTHO05D004780 4.7e-06 56.6 34 64.7
Haze_09388 Corylus avellana HOM05D006724 ORTHO05D008514 6.2e-06 56.2 188 25.0
Potri.011G141300 Populus trichocarpa HOM05D006724 ORTHO05D008514 6.2e-06 56.2 201 24.9


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