Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_23239 Corylus avellana HOM05D003671 ORTHO05D004285 2.6e-177 625.5 389 100.0
Haze_21142 Corylus avellana HOM05D003671 ORTHO05D004285 4.9e-107 392.1 262 98.1
Haze_21147 Corylus avellana HOM05D003671 ORTHO05D004285 1.9e-106 390.2 262 97.7
Cfa017060 Carpinus fangiana HOM05D003671 ORTHO05D004285 7.6e-100 368.2 262 93.9
QL07p032733 Quercus lobata HOM05D003671 ORTHO05D004285 1.7e-75 287.3 270 72.6
CiPaw.10G164200 Carya illinoinensis HOM05D003671 ORTHO05D004285 2.5e-71 273.5 262 72.1
CiPaw.09G218900 Carya illinoinensis HOM05D003671 ORTHO05D004285 5.7e-71 272.3 265 73.6
Prupe.6G290600 Prunus persica HOM05D003671 ORTHO05D004285 2.4e-69 266.9 262 68.7
Duzib212G0018 Durio zibethinus HOM05D003671 ORTHO05D004285 5.0e-67 259.2 264 67.8
RcHm_v2.0_Chr3g0460911 Rosa chinensis HOM05D003671 ORTHO05D004285 1.6e-65 254.2 263 68.1
Manes.09G115800 Manihot esculenta HOM05D003671 ORTHO05D004285 3.6e-65 253.1 262 68.3
Manes.09G116100 Manihot esculenta HOM05D003671 ORTHO05D004285 3.0e-64 250.0 262 65.3
MD12G1185300 Malus domestica HOM05D003671 ORTHO05D004285 3.9e-64 249.6 263 68.1
Thecc.04G154700 Theobroma cacao HOM05D003671 ORTHO05D004285 8.8e-64 248.4 270 64.1
Cpa.g.sc86.30 Carica papaya HOM05D003671 ORTHO05D004285 3.3e-63 246.5 264 69.7
FAN05G5788 Fragaria x ananassa HOM05D003671 ORTHO05D004285 4.4e-63 246.1 263 62.7
FAN05G3119 Fragaria x ananassa HOM05D003671 ORTHO05D004285 6.3e-62 242.3 263 62.7
Duzib151G0206 Durio zibethinus HOM05D003671 ORTHO05D004285 8.2e-62 241.9 264 67.4
Atru.chr8.2376 Acer truncatum HOM05D003671 ORTHO05D004285 2.0e-60 237.3 262 70.6
GSVIVG01030211001 Vitis vinifera HOM05D003671 ORTHO05D004285 2.9e-59 233.4 260 66.9
Ciclev10011037m.g Citrus clementina HOM05D003671 ORTHO05D004285 5.0e-59 232.6 263 65.0
Psat0s1450g0040 Pisum sativum HOM05D003671 ORTHO05D004285 6.5e-59 232.3 262 64.5
Potri.006G107500 Populus trichocarpa HOM05D003671 ORTHO05D004285 6.5e-59 232.3 262 61.5
FAN14G5445 Fragaria x ananassa HOM05D003671 ORTHO05D004285 3.2e-58 229.9 263 70.0
Sabra06G0083600 Salix brachista HOM05D003671 ORTHO05D004285 4.2e-58 229.6 262 62.2
FvH4_6g10170 Fragaria vesca HOM05D003671 ORTHO05D004285 9.4e-58 228.4 263 69.6
Medtr7g072520 Medicago truncatula HOM05D003671 ORTHO05D004285 9.4e-58 228.4 262 65.6
Sabra04G0151200 Salix brachista HOM05D003671 ORTHO05D004285 2.1e-57 227.3 262 66.0
Actinidia11522 Actinidia chinensis HOM05D003671 ORTHO05D004285 3.6e-57 226.5 262 60.7
Ca_07746_v3 Cicer arietinum L. HOM05D003671 ORTHO05D004285 1.8e-56 224.2 262 68.3
Glyma.18G211200 Glycine max HOM05D003671 ORTHO05D004285 8.8e-56 221.9 265 62.3
Lj3C942T7 Lonicera japonica HOM05D003671 ORTHO05D004285 8.8e-56 221.9 262 62.2
TAR633G2716 Trochodendron aralioides HOM05D003671 ORTHO05D004285 1.5e-55 221.1 265 61.9
Rhsim05G0229100 Rhododendron simsii HOM05D003671 ORTHO05D004285 2.6e-55 220.3 263 62.4
COL.COLO4_30007 Corchorus olitorius HOM05D003671 ORTHO05D004285 7.5e-55 218.8 264 65.5
CSS0036424 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 4.8e-54 216.1 262 60.7
Dinv25318 Davidia involucrata HOM05D003671 ORTHO05D004285 6.3e-54 215.7 262 56.5
Hma1.2p1_1052F.1_g252340 Hydrangea macrophylla HOM05D003671 ORTHO05D004285 8.2e-54 215.3 262 61.8
Dinv11386 Davidia involucrata HOM05D003671 ORTHO05D004285 1.4e-53 214.5 262 59.9
CSS0037141 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 1.8e-53 214.2 262 60.3
Glyma.09G277700 Glycine max HOM05D003671 ORTHO05D004285 2.4e-53 213.8 279 59.5
Actinidia29047 Actinidia chinensis HOM05D003671 ORTHO05D004285 4.1e-53 213.0 262 62.2
Gohir.D02G108200 Gossypium hirsutum HOM05D003671 ORTHO05D004285 4.1e-53 213.0 264 53.0
vmacro20357 Vaccinium macrocarpon HOM05D003671 ORTHO05D004285 4.1e-53 213.0 277 59.6
Gorai.005G122800 Gossypium raimondii HOM05D003671 ORTHO05D004285 1.2e-52 211.5 264 51.9
Lj1g0018847 Lotus japonicus HOM05D003671 ORTHO05D004285 2.0e-52 210.7 262 62.6
CSS0025205 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 2.2e-51 207.2 262 54.6
CSS0031435 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 2.2e-51 207.2 262 54.6
TPR.G4425 Trifolium pratense HOM05D003671 ORTHO05D004285 5.0e-51 206.1 262 65.6
Potri.016G133700 Populus trichocarpa HOM05D003671 ORTHO05D004285 3.2e-50 203.4 262 60.7
CsaV3_3G033210 Cucumis sativus L. HOM05D003671 ORTHO05D004285 1.6e-49 201.1 262 60.7
Nn2g10354 Nelumbo nucifera HOM05D003671 ORTHO05D004285 2.1e-49 200.7 265 57.7
Glyma.18G212400 Glycine max HOM05D003671 ORTHO05D004285 2.7e-49 200.3 263 64.6
Ca_07750_v3 Cicer arietinum L. HOM05D003671 ORTHO05D004285 6.1e-49 199.1 262 63.4
Lalb_Chr19g0124051 Lupinus albus HOM05D003671 ORTHO05D004285 6.1e-49 199.1 262 65.6
TWI77G0322 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 6.1e-49 199.1 264 59.5
Ah.08g209720 Amaranthus hybridus HOM05D003671 ORTHO05D004285 8.0e-49 198.7 262 62.2
arahy.Tifrunner.gnm1.ann1.616PIC Arachis hypogaea HOM05D003671 ORTHO05D004285 1.8e-48 197.6 262 63.4
CANSAT35G0504 Cannabis sativa HOM05D003671 ORTHO05D004285 2.3e-48 197.2 262 61.5
arahy.Tifrunner.gnm1.ann1.8XV151 Arachis hypogaea HOM05D003671 ORTHO05D004285 3.0e-48 196.8 262 63.4
MELO3C009114.2 Cucumis melo HOM05D003671 ORTHO05D004285 4.0e-48 196.4 262 60.3
Glyma.09G277602 Glycine max HOM05D003671 ORTHO05D004285 1.2e-47 194.9 279 57.0
Migut.J00060 Erythranthe guttata HOM05D003671 ORTHO05D004285 1.5e-47 194.5 260 55.4
Eucgr.K01274 Eucalyptus grandis HOM05D003671 ORTHO05D004285 1.3e-46 191.4 287 54.0
Lalb_Chr03g0043701 Lupinus albus HOM05D003671 ORTHO05D004285 1.3e-46 191.4 262 60.7
TWI74G1343 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 2.2e-46 190.7 262 58.0
EL10Ac7g17060 Beta vulgaris HOM05D003671 ORTHO05D004285 6.3e-46 189.1 312 56.4
Cc06_g00530 Coffea canephora HOM05D003671 ORTHO05D004285 1.1e-45 188.3 261 57.9
Lj1g0001828 Lotus japonicus HOM05D003671 ORTHO05D004285 1.1e-45 188.3 266 63.9
VMungo1383G1272 Vigna mungo HOM05D003671 ORTHO05D004285 1.8e-45 187.6 310 53.9
SGA_v2.0_scaffold85G26648 Striga asiatica HOM05D003671 ORTHO05D004285 2.4e-45 187.2 260 53.5
TAR636G3051 Trochodendron aralioides HOM05D003671 ORTHO05D004285 4.1e-45 186.4 265 57.7
Phvul.008G084500 Phaseolus vulgaris HOM05D003671 ORTHO05D004285 9.1e-45 185.3 310 55.8
Phvul.008G084400 Phaseolus vulgaris HOM05D003671 ORTHO05D004285 1.2e-44 184.9 310 55.5
PGR004G1797 Punica granatum HOM05D003671 ORTHO05D004285 2.7e-44 183.7 273 49.8
Sed0011007 Sechium edule HOM05D003671 ORTHO05D004285 2.7e-44 183.7 260 60.4
MSTRG.18954 Avicennia marina HOM05D003671 ORTHO05D004285 4.5e-44 183.0 257 57.6
TAR636G0316 Trochodendron aralioides HOM05D003671 ORTHO05D004285 1.0e-43 181.8 265 56.6
AUR62006358 Chenopodium quinoa HOM05D003671 ORTHO05D004285 1.7e-43 181.0 262 62.2
TPR.G4424 Trifolium pratense HOM05D003671 ORTHO05D004285 1.7e-43 181.0 262 61.8
MBI15_g31431_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 2.2e-43 180.6 266 56.4
Medtr7g072590 Medicago truncatula HOM05D003671 ORTHO05D004285 3.8e-43 179.9 262 59.2
ClCG10G022620 Citrullus lanatus HOM05D003671 ORTHO05D004285 1.1e-42 178.3 248 60.9
Gohir.A03G087500 Gossypium hirsutum HOM05D003671 ORTHO05D004285 1.9e-42 177.6 264 56.4
Rhsim04G0122600 Rhododendron simsii HOM05D003671 ORTHO05D004285 1.9e-42 177.6 257 51.8
Psat3g121000 Pisum sativum HOM05D003671 ORTHO05D004285 2.5e-42 177.2 268 58.6
THA.LOC104806637 Tarenaya hassleriana HOM05D003671 ORTHO05D004285 2.5e-42 177.2 264 54.5
MD04G1172000 Malus domestica HOM05D003671 ORTHO05D004285 3.2e-42 176.8 260 60.0
SGA_v2.0_scaffold373G50172 Striga asiatica HOM05D003671 ORTHO05D004285 5.5e-42 176.0 260 56.9
Oeu026963.1 Olea europaea HOM05D003671 ORTHO05D004285 7.2e-42 175.6 260 53.8
Gohir.A03G088100 Gossypium hirsutum HOM05D003671 ORTHO05D004285 2.1e-41 174.1 264 56.1
Gohir.D02G108300 Gossypium hirsutum HOM05D003671 ORTHO05D004285 2.7e-41 173.7 264 56.1
Sc07g0005760 Simmondsia chinensis HOM05D003671 ORTHO05D004285 4.7e-41 172.9 296 53.0
Lalb_Chr01g0023661 Lupinus albus HOM05D003671 ORTHO05D004285 1.4e-40 171.4 262 57.6
FAN09G2383 Fragaria x ananassa HOM05D003671 ORTHO05D004285 3.0e-40 170.2 263 58.9
Gorai.005G122900 Gossypium raimondii HOM05D003671 ORTHO05D004285 1.5e-39 167.9 264 55.3
Nitab4.5_0007794g0010 Nicotiana tabacum HOM05D003671 ORTHO05D004285 1.5e-39 167.9 299 46.2
Peaxi162Scf00595g00423 Petunia axillaris HOM05D003671 ORTHO05D004285 1.5e-39 167.9 301 49.8
Thhalv10016251m.g Eutrema salsugineum HOM05D003671 ORTHO05D004285 2.6e-39 167.2 261 55.6
Lalb_Chr07g0190641 Lupinus albus HOM05D003671 ORTHO05D004285 1.3e-38 164.9 262 54.6
CAN.G604.1 Capsicum annuum HOM05D003671 ORTHO05D004285 1.7e-38 164.5 326 43.9
Hund03740 Selenicereus undatus HOM05D003671 ORTHO05D004285 1.7e-38 164.5 281 45.9
Sp4g20820 Schrenkiella parvula HOM05D003671 ORTHO05D004285 8.3e-38 162.2 263 51.0
Aqoxy2G00724 Aquilegia oxysepala HOM05D003671 ORTHO05D004285 1.1e-37 161.8 265 52.8
Nitab4.5_0002204g0070 Nicotiana tabacum HOM05D003671 ORTHO05D004285 4.1e-37 159.8 300 47.0
Aa31LG5G23820 Aethionema arabicum HOM05D003671 ORTHO05D004285 1.6e-36 157.9 264 53.4
AUR62029686 Chenopodium quinoa HOM05D003671 ORTHO05D004285 4.5e-36 156.4 297 52.5
Carub.0004s2047 Capsella rubella HOM05D003671 ORTHO05D004285 5.9e-36 156.0 262 55.0
ECA247G1347 Erigeron canadensis HOM05D003671 ORTHO05D004285 5.0e-35 152.9 262 53.4
FAN02G1273 Fragaria x ananassa HOM05D003671 ORTHO05D004285 8.6e-35 152.1 262 56.9
AT3G51650 Arabidopsis thaliana HOM05D003671 ORTHO05D004285 1.5e-34 151.4 300 42.0
AT3G51640 Arabidopsis thaliana HOM05D003671 ORTHO05D004285 2.5e-34 150.6 263 48.7
MSTRG.5514 Avicennia marina HOM05D003671 ORTHO05D004285 4.3e-34 149.8 259 47.9
AL5G32090 Arabidopsis lyrata HOM05D003671 ORTHO05D004285 2.1e-33 147.5 263 46.8
TWI53G1222 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 1.0e-32 145.2 263 56.3
AL4G35770 Arabidopsis lyrata HOM05D003671 ORTHO05D004285 2.3e-32 144.1 262 52.3
Oeu060440.1 Olea europaea HOM05D003671 ORTHO05D004285 3.4e-31 140.2 260 50.8
CARHR133180 Cardamine hirsuta HOM05D003671 ORTHO05D004285 9.8e-31 138.7 262 50.8
CAN.G15.24 Capsicum annuum HOM05D003671 ORTHO05D004285 2.9e-30 137.1 279 52.0
Nn5g26901 Nelumbo nucifera HOM05D003671 ORTHO05D004285 6.4e-30 136.0 275 53.8
Nitab4.5_0002348g0020 Nicotiana tabacum HOM05D003671 ORTHO05D004285 1.1e-29 135.2 291 53.6
PGSC0003DMG400013061 Solanum tuberosum HOM05D003671 ORTHO05D004285 2.4e-29 134.0 292 52.7
CARHR161250 Cardamine hirsuta HOM05D003671 ORTHO05D004285 5.4e-29 132.9 262 42.0
Nitab4.5_0000126g0070 Nicotiana tabacum HOM05D003671 ORTHO05D004285 9.2e-29 132.1 291 52.9
PSO384G1707 Papaver somniferum HOM05D003671 ORTHO05D004285 9.2e-29 132.1 272 54.4
Peaxi162Scf00732g00447 Petunia axillaris HOM05D003671 ORTHO05D004285 1.2e-28 131.7 262 55.7
PSO339G1890 Papaver somniferum HOM05D003671 ORTHO05D004285 3.5e-28 130.2 276 54.0
DCAR_021427 Daucus carota HOM05D003671 ORTHO05D004285 7.8e-28 129.0 269 39.8
Psat3g120920 Pisum sativum HOM05D003671 ORTHO05D004285 3.0e-27 127.1 177 71.2
Sopen09g011320 Solanum pennellii HOM05D003671 ORTHO05D004285 6.6e-27 125.9 279 54.5
DCAR_010961 Daucus carota HOM05D003671 ORTHO05D004285 1.1e-26 125.2 268 36.2
Solyc09g018310.4 Solanum lycopersicum HOM05D003671 ORTHO05D004285 2.5e-26 124.0 279 54.1
Oeu026958.1 Olea europaea HOM05D003671 ORTHO05D004285 6.2e-25 119.4 246 36.6
HanXRQChr16g0510341 Helianthus annuus HOM05D003671 ORTHO05D004285 4.4e-23 113.2 270 47.0
vmacro08928 Vaccinium macrocarpon HOM05D003671 ORTHO05D004285 4.4e-23 113.2 260 46.9
BcaB01g00433 Brassica carinata HOM05D003671 ORTHO05D004285 9.8e-23 112.1 262 45.0
PSO675G2859 Papaver somniferum HOM05D003671 ORTHO05D004285 9.8e-23 112.1 270 51.9
Lsat_1_v5_gn_8_119680 Lactuca sativa HOM05D003671 ORTHO05D004285 2.2e-22 110.9 265 46.4
Oeu060446.2 Olea europaea HOM05D003671 ORTHO05D004285 8.3e-22 109.0 243 47.7
HanXRQChr16g0510331 Helianthus annuus HOM05D003671 ORTHO05D004285 4.1e-21 106.7 271 43.5
MBI03_g38977_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 1.2e-20 105.1 271 45.4
HPP92_022854 Vanilla planifolia HOM05D003671 ORTHO05D004654 1.2e-20 105.1 329 41.0
PSO541G0005 Papaver somniferum HOM05D003671 ORTHO05D004285 1.6e-20 104.8 270 45.6
Zm00001eb163960 Zea mays HOM05D003671 ORTHO05D004285 2.0e-20 104.4 273 45.1
C08p26830 Brassica napus HOM05D003671 ORTHO05D004285 6.0e-20 102.8 263 44.5
BcaB01g00434 Brassica carinata HOM05D003671 ORTHO05D004285 7.8e-20 102.4 263 43.7
Zm00001eb406310 Zea mays HOM05D003671 ORTHO05D004285 1.0e-19 102.1 271 49.4
A09p44780 Brassica napus HOM05D003671 ORTHO05D004285 1.3e-19 101.7 262 42.0
Zm00001eb195220 Zea mays HOM05D003671 ORTHO05D004285 1.3e-19 101.7 268 44.8
A09p44750 Brassica napus HOM05D003671 ORTHO05D004285 1.7e-19 101.3 285 42.8
BolC8t50298H Brassica oleracea HOM05D003671 ORTHO05D004285 3.9e-19 100.1 285 43.9
BolC8t50300H Brassica oleracea HOM05D003671 ORTHO05D004285 3.9e-19 100.1 269 43.9
BraA09t39936Z Brassica rapa HOM05D003671 ORTHO05D004285 6.6e-19 99.4 288 42.4
BcaB01g00498 Brassica carinata HOM05D003671 ORTHO05D004285 8.6e-19 99.0 269 44.2
C08p26840 Brassica napus HOM05D003671 ORTHO05D004285 8.6e-19 99.0 269 44.2
BraA09t39938Z Brassica rapa HOM05D003671 ORTHO05D004285 1.5e-18 98.2 269 44.6
ECA236G1062 Erigeron canadensis HOM05D003671 ORTHO05D004285 3.1e-16 90.5 273 39.2
unitig_699.g19370 Utricularia gibba HOM05D003671 ORTHO05D004285 1.7e-14 84.7 259 44.4
Haze_14964 Corylus avellana HOM05D000694 ORTHO05D000530 1.9e-10 71.2 37 100.0
Haze_15967 Corylus avellana HOM05D008167 ORTHO05D010296 1.9e-10 71.2 37 100.0
HPP92_018092 Vanilla planifolia HOM05D003671 ORTHO05D004285 1.2e-09 68.6 264 37.9
ATR0681G108 Amborella trichopoda HOM05D003671 ORTHO05D004285 1.6e-09 68.2 222 36.9
SpUn1372_0010 Schrenkiella parvula HOM05D003671 ORTHO05D004285 1.8e-08 64.7 165 44.8
Os11g0113200 Oryza sativa ssp. japonica HOM05D003671 ORTHO05D004285 1.2e-07 62.0 244 47.5
Sed0014254 Sechium edule HOM05D003671 ORTHO05D004285 7.6e-07 59.3 196 36.7
Os12g0112600 Oryza sativa ssp. japonica HOM05D003671 ORTHO05D004285 9.9e-07 58.9 244 47.1


User provided reference genes

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