Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_23143 Corylus avellana HOM05D004378 ORTHO05D005269 6.1e-194 680.6 344 100.0
Cfa009777 Carpinus fangiana HOM05D004378 ORTHO05D005269 5.9e-181 637.5 331 97.0
CiPaw.13G159900 Carya illinoinensis HOM05D004378 ORTHO05D005269 1.3e-156 556.6 356 80.3
Atru.chr3.2709 Acer truncatum HOM05D004378 ORTHO05D005269 1.5e-155 553.1 357 80.1
CiPaw.14G118500 Carya illinoinensis HOM05D004378 ORTHO05D005269 1.5e-155 553.1 357 79.8
Prupe.4G250000 Prunus persica HOM05D004378 ORTHO05D005269 4.3e-155 551.6 352 81.0
CANSAT54G1532 Cannabis sativa HOM05D004378 ORTHO05D005269 1.1e-153 547.0 360 78.6
Dinv22174 Davidia involucrata HOM05D004378 ORTHO05D005269 2.0e-152 542.7 326 84.7
QL01p004640 Quercus lobata HOM05D004378 ORTHO05D005269 2.0e-152 542.7 358 78.2
CSS0043718 Camellia sinensis var. sinensis HOM05D004378 ORTHO05D005269 2.6e-152 542.3 355 79.4
Manes.06G163800 Manihot esculenta HOM05D004378 ORTHO05D005269 1.3e-151 540.0 333 81.7
Lj6g0003660 Lotus japonicus HOM05D004378 ORTHO05D005269 6.4e-151 537.7 356 79.8
GSVIVG01025251001 Vitis vinifera HOM05D004378 ORTHO05D005269 2.4e-150 535.8 350 79.7
RcHm_v2.0_Chr5g0052271 Rosa chinensis HOM05D004378 ORTHO05D005269 4.2e-150 535.0 342 80.4
arahy.Tifrunner.gnm1.ann1.B78H3K Arachis hypogaea HOM05D004378 ORTHO05D005269 1.2e-149 533.5 355 77.5
arahy.Tifrunner.gnm1.ann1.YL0VRD Arachis hypogaea HOM05D004378 ORTHO05D005269 1.6e-149 533.1 355 77.7
Potri.009G052800 Populus trichocarpa HOM05D004378 ORTHO05D005269 1.6e-149 533.1 359 78.0
Duzib168G0314 Durio zibethinus HOM05D004378 ORTHO05D005269 2.1e-149 532.7 334 80.8
Thecc.09G234500 Theobroma cacao HOM05D004378 ORTHO05D005269 3.5e-149 531.9 343 79.0
TWI34G1172 Tripterygium wilfordii HOM05D004378 ORTHO05D005269 7.8e-149 530.8 347 79.0
Duzib150G1120 Durio zibethinus HOM05D004378 ORTHO05D005269 1.3e-148 530.0 334 80.8
COL.COLO4_07579 Corchorus olitorius HOM05D004378 ORTHO05D005269 3.0e-148 528.9 310 86.1
Hma1.2p1_0368F.1_g137300 Hydrangea macrophylla HOM05D004378 ORTHO05D005269 5.1e-148 528.1 335 82.1
TPR.G14725 Trifolium pratense HOM05D004378 ORTHO05D005269 5.1e-148 528.1 351 78.1
TWI60G1037 Tripterygium wilfordii HOM05D004378 ORTHO05D005269 5.1e-148 528.1 351 77.5
Ciclev10015746m.g Citrus clementina HOM05D004378 ORTHO05D005269 1.1e-147 526.9 334 79.9
MD11G1192300 Malus domestica HOM05D004378 ORTHO05D005269 1.9e-147 526.2 352 77.6
Gohir.A08G013900 Gossypium hirsutum HOM05D004378 ORTHO05D005269 4.3e-147 525.0 334 80.2
Gohir.D08G024400 Gossypium hirsutum HOM05D004378 ORTHO05D005269 4.3e-147 525.0 334 80.2
Gorai.004G019800 Gossypium raimondii HOM05D004378 ORTHO05D005269 4.3e-147 525.0 334 80.2
Ca_14874_v3 Cicer arietinum L. HOM05D004378 ORTHO05D005269 5.6e-147 524.6 353 76.5
Medtr3g061490 Medicago truncatula HOM05D004378 ORTHO05D005269 9.6e-147 523.9 353 76.2
Actinidia16337 Actinidia chinensis HOM05D004378 ORTHO05D005269 3.6e-146 521.9 360 75.8
FvH4_3g28770 Fragaria vesca HOM05D004378 ORTHO05D005269 6.2e-146 521.2 342 78.9
Actinidia06909 Actinidia chinensis HOM05D004378 ORTHO05D005269 8.1e-146 520.8 342 77.2
FAN25G2048 Fragaria x ananassa HOM05D004378 ORTHO05D005269 1.1e-145 520.4 362 75.1
Glyma.08G336000 Glycine max HOM05D004378 ORTHO05D005269 1.1e-145 520.4 351 78.1
Potri.001G257500 Populus trichocarpa HOM05D004378 ORTHO05D005269 1.4e-145 520.0 359 75.5
FAN11G1994 Fragaria x ananassa HOM05D004378 ORTHO05D005269 1.8e-145 519.6 362 75.1
Nn2g15350 Nelumbo nucifera HOM05D004378 ORTHO05D005269 5.3e-145 518.1 331 78.5
Sabra16G0157500 Salix brachista HOM05D004378 ORTHO05D005269 5.3e-145 518.1 356 77.0
Lalb_Chr15g0082531 Lupinus albus HOM05D004378 ORTHO05D005269 3.4e-144 515.4 350 75.4
Sed0026402 Sechium edule HOM05D004378 ORTHO05D005269 4.4e-144 515.0 319 80.3
FAN16G3181 Fragaria x ananassa HOM05D004378 ORTHO05D005269 5.8e-144 514.6 362 74.6
Nn7g36225 Nelumbo nucifera HOM05D004378 ORTHO05D005269 5.8e-144 514.6 323 80.2
VMungo0540G0714 Vigna mungo HOM05D004378 ORTHO05D005269 5.8e-144 514.6 337 78.0
TAR369G0513 Trochodendron aralioides HOM05D004378 ORTHO05D005269 7.6e-144 514.2 344 77.6
Glyma.18G071100 Glycine max HOM05D004378 ORTHO05D005269 3.8e-143 511.9 346 77.7
Rhsim13G0220800 Rhododendron simsii HOM05D004378 ORTHO05D005269 4.9e-143 511.5 326 79.4
Cc01_g04470 Coffea canephora HOM05D004378 ORTHO05D005269 6.4e-143 511.1 350 77.1
DCAR_030049 Daucus carota HOM05D004378 ORTHO05D005269 1.1e-142 510.4 351 75.5
ClCG03G013210 Citrullus lanatus HOM05D004378 ORTHO05D005269 2.4e-142 509.2 352 75.3
Phvul.006G062100 Phaseolus vulgaris HOM05D004378 ORTHO05D005269 2.4e-142 509.2 338 76.9
MELO3C015197.2 Cucumis melo HOM05D004378 ORTHO05D005269 1.2e-141 506.9 352 75.3
Oeu001481.2 Olea europaea HOM05D004378 ORTHO05D005269 3.5e-141 505.4 317 78.9
CsaV3_1G042790 Cucumis sativus L. HOM05D004378 ORTHO05D005269 4.6e-141 505.0 352 75.0
CSS0001002 Camellia sinensis var. sinensis HOM05D004378 ORTHO05D005269 3.0e-140 502.3 322 80.1
Eucgr.J00761 Eucalyptus grandis HOM05D004378 ORTHO05D005269 5.1e-140 501.5 347 73.5
Sabra09G0038500 Salix brachista HOM05D004378 ORTHO05D005269 6.6e-140 501.1 371 71.4
Migut.D00605 Erythranthe guttata HOM05D004378 ORTHO05D005269 2.5e-139 499.2 321 77.9
CAN.G1204.2 Capsicum annuum HOM05D004378 ORTHO05D005269 3.3e-139 498.8 341 75.7
Psat5g163880 Pisum sativum HOM05D004378 ORTHO05D005269 4.3e-139 498.4 356 73.0
HanXRQChr13g0401501 Helianthus annuus HOM05D004378 ORTHO05D005269 5.6e-139 498.0 324 78.1
Lalb_Chr18g0050451 Lupinus albus HOM05D004378 ORTHO05D005269 7.3e-139 497.7 356 74.4
MBI04_g36075_MAGBIO Magnolia biondii HOM05D004378 ORTHO05D005269 7.3e-139 497.7 339 73.7
MSTRG.18430 Avicennia marina HOM05D004378 ORTHO05D005269 9.6e-139 497.3 318 79.2
Nitab4.5_0000023g0700 Nicotiana tabacum HOM05D004378 ORTHO05D005269 9.6e-139 497.3 354 72.9
Peaxi162Scf00004g02527 Petunia axillaris HOM05D004378 ORTHO05D005269 2.8e-138 495.7 331 77.3
Migut.N02321 Erythranthe guttata HOM05D004378 ORTHO05D005269 6.2e-138 494.6 301 80.4
Oeu016680.1 Olea europaea HOM05D004378 ORTHO05D005269 8.1e-138 494.2 333 74.8
PGSC0003DMG400007339 Solanum tuberosum HOM05D004378 ORTHO05D005269 1.8e-137 493.0 349 73.4
Peaxi162Scf00032g00327 Petunia axillaris HOM05D004378 ORTHO05D005269 4.0e-137 491.9 331 76.7
ECA233G1578 Erigeron canadensis HOM05D004378 ORTHO05D005269 1.2e-136 490.3 324 76.9
Nitab4.5_0002786g0020 Nicotiana tabacum HOM05D004378 ORTHO05D005269 3.4e-136 488.8 368 69.8
Sopen11g025430 Solanum pennellii HOM05D004378 ORTHO05D005269 4.5e-136 488.4 347 73.5
CDE05G0340 Ceratophyllum demersum HOM05D004378 ORTHO05D005269 1.3e-135 486.9 339 73.5
SGA_v2.0_scaffold247G44883 Striga asiatica HOM05D004378 ORTHO05D005269 1.3e-135 486.9 288 83.3
HanXRQChr02g0051301 Helianthus annuus HOM05D004378 ORTHO05D005269 8.4e-135 484.2 321 77.3
PGR119G1351 Punica granatum HOM05D004378 ORTHO05D005269 2.4e-134 482.6 319 76.8
CDE05G0884 Ceratophyllum demersum HOM05D004378 ORTHO05D005269 5.4e-134 481.5 329 74.8
PGSC0003DMG400010703 Solanum tuberosum HOM05D004378 ORTHO05D005269 1.2e-133 480.3 354 70.9
Sopen01g003990 Solanum pennellii HOM05D004378 ORTHO05D005269 1.6e-133 479.9 329 75.1
Solyc01g008470.3 Solanum lycopersicum HOM05D004378 ORTHO05D005269 3.5e-133 478.8 329 74.8
Aqoxy1G00284 Aquilegia oxysepala HOM05D004378 ORTHO05D005269 2.3e-132 476.1 350 69.4
SGA_v2.0_scaffold8G04586 Striga asiatica HOM05D004378 ORTHO05D005269 8.7e-132 474.2 315 75.2
Manes.14G003200 Manihot esculenta HOM05D004378 ORTHO05D005269 9.6e-131 470.7 326 75.5
THA.LOC104799106 Tarenaya hassleriana HOM05D004378 ORTHO05D005269 1.6e-130 469.9 352 69.6
EL10Ac4g10244 Beta vulgaris HOM05D004378 ORTHO05D005269 2.8e-130 469.2 328 72.6
Lsat_1_v5_gn_2_31060 Lactuca sativa HOM05D004378 ORTHO05D005269 3.7e-130 468.8 297 78.1
Lj2A629T47 Lonicera japonica HOM05D004378 ORTHO05D005269 1.4e-129 466.8 320 74.4
Dinv36255 Davidia involucrata HOM05D004378 ORTHO05D005269 6.9e-129 464.5 285 83.5
Lsat_1_v5_gn_6_26200 Lactuca sativa HOM05D004378 ORTHO05D005269 2.6e-128 462.6 336 71.1
Nitab4.5_0001587g0030 Nicotiana tabacum HOM05D004378 ORTHO05D005269 5.8e-128 461.5 348 70.4
AUR62000126 Chenopodium quinoa HOM05D004378 ORTHO05D005269 1.0e-127 460.7 323 71.8
unitig_699.g19136 Utricularia gibba HOM05D004378 ORTHO05D005269 1.0e-127 460.7 300 76.3
Aa31LG10G3540 Aethionema arabicum HOM05D004378 ORTHO05D005269 1.1e-126 457.2 312 74.7
PSO384G0525 Papaver somniferum HOM05D004378 ORTHO05D005269 1.4e-126 456.8 325 70.8
PSO339G6315 Papaver somniferum HOM05D004378 ORTHO05D005269 7.1e-126 454.5 350 67.4
unitig_27.g24995 Utricularia gibba HOM05D004378 ORTHO05D005269 2.1e-125 453.0 300 74.7
Nitab4.5_0002741g0140 Nicotiana tabacum HOM05D004378 ORTHO05D005269 2.7e-125 452.6 318 73.3
THA.LOC104816878 Tarenaya hassleriana HOM05D004378 ORTHO05D005269 7.9e-125 451.1 353 67.1
CARHR096800 Cardamine hirsuta HOM05D004378 ORTHO05D005269 1.0e-124 450.7 347 67.4
Ah.06g194140 Amaranthus hybridus HOM05D004378 ORTHO05D005269 3.9e-124 448.7 299 73.2
Os02g0435000 Oryza sativa ssp. japonica HOM05D004378 ORTHO05D005269 3.3e-123 445.7 326 67.5
ATR0332G071 Amborella trichopoda HOM05D004378 ORTHO05D005269 9.6e-123 444.1 333 69.7
THA.LOC104824616 Tarenaya hassleriana HOM05D004378 ORTHO05D005269 1.3e-122 443.7 337 70.0
Hund22027 Selenicereus undatus HOM05D004378 ORTHO05D005269 1.6e-122 443.4 344 65.7
Zm00001eb064100 Zea mays HOM05D004378 ORTHO05D005269 6.2e-122 441.4 340 65.6
BraA05t21666Z Brassica rapa HOM05D004378 ORTHO05D005269 9.0e-121 437.6 353 65.7
BcaB04g20618 Brassica carinata HOM05D004378 ORTHO05D005269 1.5e-120 436.8 351 65.8
AT3G20920 Arabidopsis thaliana HOM05D004378 ORTHO05D005269 2.6e-120 436.0 330 68.5
BcaB06g26169 Brassica carinata HOM05D004378 ORTHO05D005269 2.6e-120 436.0 351 66.4
A05p27790 Brassica napus HOM05D004378 ORTHO05D005269 3.4e-120 435.6 352 66.2
Sed0000917 Sechium edule HOM05D004378 ORTHO05D005269 4.5e-120 435.3 367 64.3
Sp3g18950 Schrenkiella parvula HOM05D004378 ORTHO05D005269 1.7e-119 433.3 351 65.5
Carub.0003s2090 Capsella rubella HOM05D004378 ORTHO05D005269 2.2e-119 433.0 346 66.2
Aa31LG8G7740 Aethionema arabicum HOM05D004378 ORTHO05D005269 2.9e-119 432.6 354 63.6
Zm00001eb210940 Zea mays HOM05D004378 ORTHO05D005269 3.8e-119 432.2 343 63.3
A01p33870 Brassica napus HOM05D004378 ORTHO05D005269 6.5e-119 431.4 351 65.0
BraA01t03495Z Brassica rapa HOM05D004378 ORTHO05D005269 1.1e-118 430.6 351 64.7
C05p43130 Brassica napus HOM05D004378 ORTHO05D005269 7.2e-118 427.9 352 65.1
BolC5t33043H Brassica oleracea HOM05D004378 ORTHO05D005269 7.2e-118 427.9 352 65.1
A03p41980 Brassica napus HOM05D004378 ORTHO05D005269 2.1e-117 426.4 344 65.7
Thhalv10021027m.g Eutrema salsugineum HOM05D004378 ORTHO05D005269 2.1e-117 426.4 349 64.5
BraA03t13351Z Brassica rapa HOM05D004378 ORTHO05D005269 2.7e-117 426.0 344 65.7
BcaC01g03532 Brassica carinata HOM05D004378 ORTHO05D005269 1.3e-116 423.7 344 65.4
C03p51390 Brassica napus HOM05D004378 ORTHO05D005269 1.3e-116 423.7 344 65.4
BolC3t17425H Brassica oleracea HOM05D004378 ORTHO05D005269 6.7e-116 421.4 354 63.3
HPP92_024875 Vanilla planifolia HOM05D004378 ORTHO05D005269 6.3e-114 414.8 324 61.1
BcaB06g26167 Brassica carinata HOM05D004378 ORTHO05D005269 1.3e-111 407.1 330 65.2
Actinidia06345 Actinidia chinensis HOM05D004378 ORTHO05D005269 1.1e-110 404.1 249 79.9
SEGI_31334 Sequoiadendron giganteum HOM05D004378 ORTHO05D005269 1.4e-108 397.1 317 62.5
vmacro04153 Vaccinium macrocarpon HOM05D004378 ORTHO05D005269 1.4e-108 397.1 465 51.2
SHI29790 Sapria himalayana HOM05D004378 ORTHO05D005269 4.8e-106 388.7 321 66.4
AL3G34880 Arabidopsis lyrata HOM05D004378 ORTHO05D005269 2.6e-104 382.9 274 69.3
BcaC05g28205 Brassica carinata HOM05D004378 ORTHO05D005269 5.0e-103 378.6 350 59.7
Lj1A330G22 Lonicera japonica HOM05D004378 ORTHO05D005269 1.0e-100 370.9 285 70.2
BolC1t04284H Brassica oleracea HOM05D004378 ORTHO05D005269 5.5e-94 348.6 261 66.7
SMO117G0234 Selaginella moellendorffii HOM05D004378 ORTHO05D005269 6.1e-93 345.1 294 58.8
Cpa.g.sc84.48 Carica papaya HOM05D004378 ORTHO05D005269 1.1e-91 340.9 214 80.8
Mapoly0080s0045 Marchantia polymorpha HOM05D004378 ORTHO05D005269 1.5e-91 340.5 302 56.6
MD03G1174500 Malus domestica HOM05D004378 ORTHO05D005269 4.8e-90 335.5 212 80.7
AagrBONN_evm.TU.Sc2ySwM_228.3794 Anthoceros agrestis HOM05D004378 ORTHO05D005269 1.7e-87 327.0 322 53.7
Pp3c16_12820 Physcomitrium patens HOM05D004378 ORTHO05D005269 1.2e-85 320.9 270 59.3
FAN21G1987 Fragaria x ananassa HOM05D004378 ORTHO05D005269 5.2e-84 315.5 203 79.8
CAN.G494.6 Capsicum annuum HOM05D004378 ORTHO05D005269 1.2e-83 314.3 219 74.9
MSTRG.21374 Avicennia marina HOM05D004378 ORTHO05D005269 4.4e-83 312.4 203 77.8
Pp3c27_5530 Physcomitrium patens HOM05D004378 ORTHO05D005269 1.7e-82 310.5 294 54.8
Lalb_Chr20g0115221 Lupinus albus HOM05D004378 ORTHO05D005269 9.1e-81 304.7 190 79.5
Sc09g0000750 Simmondsia chinensis HOM05D004378 ORTHO05D005269 3.5e-80 302.8 202 75.2
Peaxi162Scf00004g02528 Petunia axillaris HOM05D004378 ORTHO05D005269 1.5e-75 287.3 251 61.8
CBR_g54322 Chara braunii HOM05D004378 ORTHO05D005269 1.4e-65 254.2 281 47.7
TAR623G1006 Trochodendron aralioides HOM05D004378 ORTHO05D005269 5.2e-52 209.1 156 72.4
TAR057G0002 Trochodendron aralioides HOM05D004378 ORTHO05D005269 6.0e-48 195.7 138 73.2
MSTRG.21373 Avicennia marina HOM05D004378 ORTHO05D005269 2.5e-46 190.3 104 85.6
Lalb_Chr20g0115231 Lupinus albus HOM05D004378 ORTHO05D005269 4.3e-46 189.5 130 70.0
AUR62019307 Chenopodium quinoa HOM05D004378 ORTHO05D005269 2.6e-43 180.3 117 73.5
SHI32640 Sapria himalayana HOM05D004378 ORTHO05D000001 3.0e-39 166.8 101 80.2
Sopen01g004010 Solanum pennellii HOM05D004378 ORTHO05D005269 2.2e-34 150.6 108 72.2
Solyc03g096225.1 Solanum lycopersicum HOM05D004378 ORTHO05D005269 5.4e-25 119.4 92 60.9
Cre02.g084050 Chlamydomonas reinhardtii HOM05D004378 ORTHO05D005269 3.5e-24 116.7 270 28.9
MCO14G148 Micromonas commoda HOM05D004378 ORTHO05D005269 1.5e-19 101.3 308 26.6


User provided reference genes

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