Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_23085 Corylus avellana HOM05D012386 ORTHO05D002688 3.2e-84 315.1 162 100.0
QL02p014709 Quercus lobata HOM05D005504 ORTHO05D002688 1.4e-68 263.1 157 84.7
Manes.05G124000 Manihot esculenta HOM05D005504 ORTHO05D002688 9.3e-52 207.2 159 71.1
Potri.005G252500 Populus trichocarpa HOM05D005504 ORTHO05D002688 5.1e-50 201.4 158 67.7
Duzib093G0882 Durio zibethinus HOM05D005504 ORTHO05D002688 2.5e-41 172.6 152 63.2
QL06p003849 Quercus lobata HOM05D012386 ORTHO05D002688 7.7e-30 134.4 120 60.8
CANSAT78G0906 Cannabis sativa HOM05D012386 ORTHO05D002688 5.5e-28 128.3 114 59.6
Sabra05G0195900 Salix brachista HOM05D012386 ORTHO05D002688 3.6e-27 125.6 123 57.7
Cfa015598 Carpinus fangiana HOM05D012386 ORTHO05D002688 5.2e-26 121.7 116 56.0
Manes.03G183002 Manihot esculenta HOM05D012386 ORTHO05D002688 1.1e-25 120.6 118 53.4
Haze_00946 Corylus avellana HOM05D012386 ORTHO05D002688 1.3e-24 117.1 116 53.4
AUR62040606 Chenopodium quinoa HOM05D000034 ORTHO05D000037 5.7e-17 91.7 101 49.5
Ah.01g010920 Amaranthus hybridus HOM05D005504 ORTHO05D002688 6.3e-16 88.2 127 40.2
Hma1.2p1_0187F.1_g082350 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 8.3e-16 87.8 137 40.9
Ah.10g026380 Amaranthus hybridus HOM05D005504 ORTHO05D002688 1.8e-15 86.7 127 39.4
EL10Ac4g08776 Beta vulgaris HOM05D005504 ORTHO05D002688 3.5e-14 82.4 94 43.6
Rhsim12G0045600 Rhododendron simsii HOM05D000034 ORTHO05D002688 3.5e-14 82.4 123 39.0
Hma1.2p1_1109F.1_g257970 Hydrangea macrophylla HOM05D005504 ORTHO05D002688 4.5e-14 82.0 126 40.5
EL10Ac6g13234 Beta vulgaris HOM05D000034 ORTHO05D002688 1.0e-13 80.9 154 37.7
Atru.chr4.843 Acer truncatum HOM05D000034 ORTHO05D002688 1.7e-13 80.1 155 37.4
AUR62042045 Chenopodium quinoa HOM05D012386 ORTHO05D002688 1.7e-13 80.1 124 38.7
AUR62044079 Chenopodium quinoa HOM05D012386 ORTHO05D002688 2.2e-13 79.7 119 43.7
DCAR_005138 Daucus carota HOM05D000034 ORTHO05D002688 3.8e-13 79.0 135 38.5
Atru.chr5.1596 Acer truncatum HOM05D005504 ORTHO05D002688 8.5e-13 77.8 155 36.1
Hma1.2p1_0076F.1_g039500 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 8.5e-13 77.8 105 41.0
QL08p058251 Quercus lobata HOM05D012386 ORTHO05D010611 2.5e-12 76.3 94 47.9
vmacro05860 Vaccinium macrocarpon HOM05D000034 ORTHO05D002688 5.5e-12 75.1 140 33.6
Lsat_1_v5_gn_5_85721 Lactuca sativa HOM05D000039 ORTHO05D000870 3.6e-11 72.4 109 38.5
Gorai.009G186900 Gossypium raimondii HOM05D005504 ORTHO05D002688 6.1e-11 71.6 81 50.6
CSS0028977 Camellia sinensis var. sinensis HOM05D005504 ORTHO05D002688 1.0e-10 70.9 118 37.3
ECA233G3708 Erigeron canadensis HOM05D004228 ORTHO05D005137 1.4e-10 70.5 141 31.2
ECA233G4621 Erigeron canadensis HOM05D000911 ORTHO05D000890 1.8e-10 70.1 115 36.5
Hma1.2p1_0317F.1_g123430 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.3e-10 69.7 91 37.4
QL02p021656 Quercus lobata HOM05D000034 ORTHO05D000037 2.3e-10 69.7 153 34.6
Lsat_1_v5_gn_9_108520 Lactuca sativa HOM05D056539 ORTHO05D002688 3.0e-10 69.3 79 41.8
Lsat_1_v5_gn_9_18201 Lactuca sativa HOM05D056539 ORTHO05D002688 4.0e-10 68.9 79 41.8
EL10Ac7g17364 Beta vulgaris HOM05D005504 ORTHO05D002688 8.8e-10 67.8 154 34.4
CSS0036183 Camellia sinensis var. sinensis HOM05D005504 ORTHO05D002688 1.2e-09 67.4 119 35.3
ECA238G0287 Erigeron canadensis HOM05D005504 ORTHO05D002688 3.4e-09 65.9 135 30.4
Hma1.2p1_0008F-2.1_g005830 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.4e-09 65.9 119 35.3
CSS0041263 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D002688 1.3e-08 63.9 115 36.5
Hma1.2p1_1121F.1_g259230 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.2e-08 63.2 72 37.5
CSS0049663 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D002688 4.9e-08 62.0 118 33.1
QL09p005462 Quercus lobata HOM05D000034 ORTHO05D000037 4.9e-08 62.0 142 33.8
CSS0015173 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D002688 6.3e-08 61.6 118 33.1
Ah.05g174390 Amaranthus hybridus HOM05D005504 ORTHO05D002688 2.4e-07 59.7 85 37.6
AUR62008529 Chenopodium quinoa HOM05D005504 ORTHO05D002688 5.4e-07 58.5 117 37.6
HanXRQChr12g0355561 Helianthus annuus HOM05D005504 ORTHO05D002688 5.4e-07 58.5 151 31.1
EL10Ac5g12237 Beta vulgaris HOM05D005504 ORTHO05D002688 9.2e-07 57.8 104 36.5
CSS0010294 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D002688 9.2e-07 57.8 123 34.1
ECA233G5926 Erigeron canadensis HOM05D012386 ORTHO05D002688 9.2e-07 57.8 133 31.6
ECA232G3538 Erigeron canadensis HOM05D005504 ORTHO05D002688 1.2e-06 57.4 105 35.2
Hma1.2p1_0609F.1_g188530 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.7e-06 56.2 95 36.8
arahy.Tifrunner.gnm1.ann1.0J418G Arachis hypogaea HOM05D000034 ORTHO05D002688 4.5e-06 55.5 65 41.5
arahy.Tifrunner.gnm1.ann1.GG48NL Arachis hypogaea HOM05D000034 ORTHO05D000037 4.5e-06 55.5 65 41.5
ECA232G2669 Erigeron canadensis HOM05D005504 ORTHO05D002688 4.5e-06 55.5 115 32.2
arahy.Tifrunner.gnm1.ann1.A110NB Arachis hypogaea HOM05D000034 ORTHO05D002688 7.7e-06 54.7 65 41.5
Lsat_1_v5_gn_7_17241 Lactuca sativa HOM05D005504 ORTHO05D002688 7.7e-06 54.7 79 36.7


User provided reference genes

Program Settings