Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_22863 Corylus avellana HOM05D006984 ORTHO05D008773 1.5e-161 572.8 284 100.0
Cfa014138 Carpinus fangiana HOM05D006984 ORTHO05D008773 1.9e-132 476.1 279 87.5
CiPaw.07G133500 Carya illinoinensis HOM05D006984 ORTHO05D008773 3.8e-101 372.1 280 71.1
QL02p015743 Quercus lobata HOM05D006984 ORTHO05D008773 1.6e-99 366.7 290 68.3
GSVIVG01013427001 Vitis vinifera HOM05D006984 ORTHO05D008773 5.6e-84 315.1 280 57.9
Cpa.g.sc26.14 Carica papaya HOM05D006984 ORTHO05D008773 1.6e-78 297.0 239 63.6
Dinv13757 Davidia involucrata HOM05D006984 ORTHO05D008773 6.0e-78 295.0 231 64.9
Sabra05G0198700 Salix brachista HOM05D006984 ORTHO05D008773 2.3e-77 293.1 291 57.0
MD16G1283100 Malus domestica HOM05D006984 ORTHO05D008773 3.3e-76 289.3 289 55.4
TAR628G1538 Trochodendron aralioides HOM05D006984 ORTHO05D008773 8.1e-75 284.6 284 54.6
Atru.chr13.60 Acer truncatum HOM05D006984 ORTHO05D008773 4.0e-74 282.3 288 56.9
Ciclev10001894m.g Citrus clementina HOM05D006984 ORTHO05D008773 2.6e-73 279.6 289 54.7
VMungo1309G1928 Vigna mungo HOM05D006984 ORTHO05D008773 1.1e-71 274.2 284 53.9
Glyma.04G014500 Glycine max HOM05D006984 ORTHO05D008773 2.1e-70 270.0 286 53.5
Duzib116G0393 Durio zibethinus HOM05D006984 ORTHO05D008773 2.7e-70 269.6 234 62.0
Glyma.06G014500 Glycine max HOM05D006984 ORTHO05D008773 3.5e-70 269.2 272 53.3
TWI56G0056 Tripterygium wilfordii HOM05D006984 ORTHO05D008773 3.5e-70 269.2 204 64.7
HanXRQChr09g0241901 Helianthus annuus HOM05D006984 ORTHO05D008773 4.6e-70 268.9 260 53.5
Phvul.009G008400 Phaseolus vulgaris HOM05D006984 ORTHO05D008773 1.7e-69 266.9 282 52.5
AUR62035170 Chenopodium quinoa HOM05D006984 ORTHO05D008773 2.3e-69 266.5 276 50.7
RcHm_v2.0_Chr7g0216691 Rosa chinensis HOM05D006984 ORTHO05D008773 2.3e-69 266.5 291 53.6
Thecc.08G099800 Theobroma cacao HOM05D006984 ORTHO05D008773 2.3e-69 266.5 224 64.3
FAN18G2056 Fragaria x ananassa HOM05D006984 ORTHO05D008773 3.0e-69 266.2 293 54.3
Manes.05G127800 Manihot esculenta HOM05D006984 ORTHO05D008773 3.0e-69 266.2 296 53.7
Nn6g31626 Nelumbo nucifera HOM05D006984 ORTHO05D008773 3.0e-69 266.2 217 63.1
AUR62024096 Chenopodium quinoa HOM05D006984 ORTHO05D008773 6.6e-69 265.0 266 52.3
ECA232G4329 Erigeron canadensis HOM05D006984 ORTHO05D008773 3.3e-68 262.7 229 56.8
Prupe.5G005500 Prunus persica HOM05D006984 ORTHO05D008773 7.3e-68 261.5 232 62.5
Potri.005G256600 Populus trichocarpa HOM05D006984 ORTHO05D008773 1.2e-67 260.8 190 67.9
PGSC0003DMG400029399 Solanum tuberosum HOM05D006984 ORTHO05D008773 2.1e-67 260.0 278 52.2
Lsat_1_v5_gn_9_48361 Lactuca sativa HOM05D006984 ORTHO05D008773 2.8e-67 259.6 289 50.9
FvH4_5g26100 Fragaria vesca HOM05D006984 ORTHO05D008773 3.6e-67 259.2 290 52.4
CAN.G208.41 Capsicum annuum HOM05D006984 ORTHO05D008773 4.7e-67 258.8 238 56.7
Solyc12g094720.3 Solanum lycopersicum HOM05D006984 ORTHO05D008773 6.2e-67 258.5 258 53.5
CSS0020436 Camellia sinensis var. sinensis HOM05D006984 ORTHO05D008773 8.1e-67 258.1 232 55.2
Sopen12g031620 Solanum pennellii HOM05D006984 ORTHO05D008773 8.1e-67 258.1 275 50.9
Aa31LG4G6540 Aethionema arabicum HOM05D006984 ORTHO05D008773 1.1e-66 257.7 225 58.2
AT1G76450 Arabidopsis thaliana HOM05D006984 ORTHO05D008773 1.1e-66 257.7 229 59.0
Peaxi162Scf00064g01321 Petunia axillaris HOM05D006984 ORTHO05D008773 1.1e-66 257.7 228 57.0
Lj1g0018204 Lotus japonicus HOM05D006984 ORTHO05D008773 1.8e-66 256.9 286 51.0
Sp5g31620 Schrenkiella parvula HOM05D006984 ORTHO05D008773 2.4e-66 256.5 222 58.1
Carub.0002s2337 Capsella rubella HOM05D006984 ORTHO05D008773 5.2e-66 255.4 257 54.5
Oeu035863.2 Olea europaea HOM05D006984 ORTHO05D008773 8.9e-66 254.6 210 58.6
AL2G36590 Arabidopsis lyrata HOM05D006984 ORTHO05D008773 1.2e-65 254.2 223 57.8
CARHR070010 Cardamine hirsuta HOM05D006984 ORTHO05D008773 3.4e-65 252.7 223 57.8
CsaV3_6G035930 Cucumis sativus L. HOM05D006984 ORTHO05D008773 3.4e-65 252.7 207 61.4
Cc10_g00260 Coffea canephora HOM05D006984 ORTHO05D008773 4.4e-65 252.3 236 57.6
Eucgr.F01822 Eucalyptus grandis HOM05D006984 ORTHO05D008773 5.8e-65 251.9 223 57.4
Lj3P797T41 Lonicera japonica HOM05D006984 ORTHO05D008773 5.8e-65 251.9 177 68.9
Gohir.D01G180900 Gossypium hirsutum HOM05D006984 ORTHO05D008773 9.9e-65 251.1 207 64.3
Gorai.002G221600 Gossypium raimondii HOM05D006984 ORTHO05D008773 9.9e-65 251.1 207 64.3
CANSAT25G0748 Cannabis sativa HOM05D006984 ORTHO05D008773 1.3e-64 250.8 286 51.0
Hma1.2p1_0489F.1_g164090 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 1.3e-64 250.8 165 72.1
Migut.N02987 Erythranthe guttata HOM05D006984 ORTHO05D008773 2.2e-64 250.0 224 55.8
THA.LOC104813736 Tarenaya hassleriana HOM05D006984 ORTHO05D008773 3.8e-64 249.2 204 62.3
BcaC08g47243 Brassica carinata HOM05D006984 ORTHO05D008773 6.4e-64 248.4 240 55.8
Gohir.A01G188600 Gossypium hirsutum HOM05D006984 ORTHO05D008773 6.4e-64 248.4 207 63.3
MELO3C026518.2 Cucumis melo HOM05D006984 ORTHO05D008773 8.4e-64 248.1 204 61.3
Actinidia17077 Actinidia chinensis HOM05D006984 ORTHO05D008773 1.1e-63 247.7 219 55.3
Lj4A811G120 Lonicera japonica HOM05D006984 ORTHO05D008773 1.4e-63 247.3 173 69.4
Ca_15385_v3 Cicer arietinum L. HOM05D006984 ORTHO05D008773 1.9e-63 246.9 224 56.7
MBI04_g31208_MAGBIO Magnolia biondii HOM05D006984 ORTHO05D008773 2.4e-63 246.5 238 54.6
TPR.G38185 Trifolium pratense HOM05D006984 ORTHO05D008773 2.4e-63 246.5 209 57.4
vmacro21767 Vaccinium macrocarpon HOM05D006984 ORTHO05D008773 3.2e-63 246.1 259 51.4
EL10Ac1g01871 Beta vulgaris HOM05D006984 ORTHO05D008773 4.2e-63 245.7 263 51.7
BraA07t31741Z Brassica rapa HOM05D006984 ORTHO05D008773 4.2e-63 245.7 240 55.4
BolC6t40095H Brassica oleracea HOM05D006984 ORTHO05D008773 7.1e-63 245.0 240 55.0
BcaC08g47152 Brassica carinata HOM05D006984 ORTHO05D008773 1.2e-62 244.2 237 55.7
Medtr3g116110 Medicago truncatula HOM05D006984 ORTHO05D008773 1.2e-62 244.2 210 58.1
MSTRG.24516 Avicennia marina HOM05D006984 ORTHO05D008773 3.5e-62 242.7 234 54.7
Hund01834 Selenicereus undatus HOM05D006984 ORTHO05D008773 3.5e-62 242.7 180 65.0
arahy.Tifrunner.gnm1.ann1.H7AW2T Arachis hypogaea HOM05D006984 ORTHO05D008773 6.0e-62 241.9 238 55.5
ClCG08G009180 Citrullus lanatus HOM05D006984 ORTHO05D008773 6.0e-62 241.9 288 47.6
arahy.Tifrunner.gnm1.ann1.QT2TB5 Arachis hypogaea HOM05D006984 ORTHO05D008773 1.7e-61 240.4 239 54.8
Psat5g008560 Pisum sativum HOM05D006984 ORTHO05D008773 1.7e-61 240.4 209 56.5
Lalb_Chr23g0265511 Lupinus albus HOM05D006984 ORTHO05D008773 3.9e-61 239.2 201 59.7
Sed0024892 Sechium edule HOM05D006984 ORTHO05D008773 5.1e-61 238.8 276 48.6
FAN13G1472 Fragaria x ananassa HOM05D006984 ORTHO05D008773 6.6e-61 238.4 323 46.4
PSO541G1597 Papaver somniferum HOM05D006984 ORTHO05D008773 1.5e-60 237.3 289 46.7
SGA_v2.0_scaffold220G42646 Striga asiatica HOM05D006984 ORTHO05D008773 7.3e-60 235.0 201 57.7
Nitab4.5_0000407g0010 Nicotiana tabacum HOM05D006984 ORTHO05D008773 1.3e-59 234.2 175 63.4
C06p50690 Brassica napus HOM05D006984 ORTHO05D008773 2.8e-59 233.0 231 54.1
COL.COLO4_12298 Corchorus olitorius HOM05D006984 ORTHO05D008773 4.8e-59 232.3 207 59.9
Thhalv10019042m.g Eutrema salsugineum HOM05D006984 ORTHO05D008773 4.8e-59 232.3 204 59.3
A07p42120 Brassica napus HOM05D006984 ORTHO05D008773 1.8e-58 230.3 238 52.5
Sc15g0004070 Simmondsia chinensis HOM05D006984 ORTHO05D008773 9.0e-58 228.0 177 61.6
Aqoxy6G02992 Aquilegia oxysepala HOM05D006984 ORTHO05D008773 9.9e-57 224.6 265 46.0
CDE05G0055 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 9.9e-57 224.6 174 62.6
CDE05G2674 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 2.9e-56 223.0 219 52.5
FAN08G1099 Fragaria x ananassa HOM05D006984 ORTHO05D008773 2.9e-56 223.0 286 48.6
PGR083G2821 Punica granatum HOM05D006984 ORTHO05D008773 2.9e-56 223.0 217 57.6
Os08g0512500 Oryza sativa ssp. japonica HOM05D006984 ORTHO05D008773 4.9e-56 222.2 210 54.8
unitig_22.g5726 Utricularia gibba HOM05D006984 ORTHO05D008773 2.4e-55 219.9 200 55.0
FAN04G1410 Fragaria x ananassa HOM05D006984 ORTHO05D008773 5.4e-55 218.8 296 47.0
ATR0001G027 Amborella trichopoda HOM05D006984 ORTHO05D008773 1.1e-52 211.1 218 50.0
Hma1.2p1_0489F.1_g164100 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 3.4e-49 199.5 123 74.0
Rhsim06G0003200 Rhododendron simsii HOM05D006984 ORTHO05D008773 9.9e-49 198.0 335 37.9
Mapoly0008s0218 Marchantia polymorpha HOM05D006984 ORTHO05D008773 7.4e-44 181.8 179 45.8
Nitab4.5_0003423g0020 Nicotiana tabacum HOM05D006984 ORTHO05D008773 1.3e-43 181.0 197 49.7
Pp3c4_15070 Physcomitrium patens HOM05D006984 ORTHO05D008773 2.6e-41 173.3 263 35.7
AagrBONN_evm.TU.Sc2ySwM_117.1863 Anthoceros agrestis HOM05D006984 ORTHO05D008773 4.6e-38 162.5 189 41.3
Zm00001eb035340 Zea mays HOM05D006984 ORTHO05D008773 1.8e-37 160.6 143 58.0
Ah.11g041950 Amaranthus hybridus HOM05D006984 ORTHO05D008773 3.8e-32 142.9 144 55.6
PGSC0003DMG400008742 Solanum tuberosum HOM05D006984 ORTHO05D008773 2.7e-30 136.7 105 65.7
SMO245G0004 Selaginella moellendorffii HOM05D006984 ORTHO05D008773 3.9e-29 132.9 173 35.8
CBR_g51937 Chara braunii HOM05D006984 ORTHO05D008773 9.7e-28 128.3 169 37.3
PGSC0003DMG400021762 Solanum tuberosum HOM05D006984 ORTHO05D008773 5.3e-26 122.5 79 74.7
Sopen12g026780 Solanum pennellii HOM05D000004 ORTHO05D000002 5.7e-20 102.4 77 63.6
MCO13G452 Micromonas commoda HOM05D006984 ORTHO05D008773 9.1e-18 95.1 194 31.4
Medtr6g034285 Medicago truncatula HOM05D000394 ORTHO05D008773 1.2e-17 94.7 63 63.5
Cre10.g446350 Chlamydomonas reinhardtii HOM05D006984 ORTHO05D008773 4.5e-17 92.8 185 31.9
PRCOL_00004638 Prasinoderma coloniale HOM05D006984 ORTHO05D008773 1.9e-15 87.4 127 37.8
Psat7g136640 Pisum sativum HOM05D006984 ORTHO05D008773 1.8e-10 70.9 116 36.2
HPP92_015474 Vanilla planifolia HOM05D006984 ORTHO05D008773 7.0e-10 68.9 51 58.8
Psat6g152440 Pisum sativum HOM05D006984 ORTHO05D000789 2.5e-07 60.5 32 78.1
Psat6g152480 Pisum sativum HOM05D006984 ORTHO05D008773 2.5e-07 60.5 32 78.1


User provided reference genes

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