Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_22830 Corylus avellana HOM05D006240 ORTHO05D007709 1.2e-93 346.7 197 100.0
QL02p015120 Quercus lobata HOM05D006240 ORTHO05D007709 3.6e-66 255.4 167 80.8
CiPaw.08G075400 Carya illinoinensis HOM05D006240 ORTHO05D007709 1.1e-65 253.8 194 72.2
Cfa014112 Carpinus fangiana HOM05D006240 ORTHO05D007709 3.1e-65 252.3 137 94.9
TAR376G0245 Trochodendron aralioides HOM05D006240 ORTHO05D007709 3.9e-60 235.3 174 70.7
GSVIVG01013393001 Vitis vinifera HOM05D006240 ORTHO05D007709 2.5e-59 232.6 176 69.9
TAR628G0625 Trochodendron aralioides HOM05D006240 ORTHO05D007709 1.8e-57 226.5 173 70.5
Dinv31964 Davidia involucrata HOM05D006240 ORTHO05D007709 2.0e-56 223.0 169 69.8
CSS0005151 Camellia sinensis var. sinensis HOM05D006240 ORTHO05D007709 3.3e-51 205.7 170 64.7
MBI05_g33294_MAGBIO Magnolia biondii HOM05D006240 ORTHO05D007709 6.2e-50 201.4 174 63.2
Hma1.2p1_0612F.1_g188890 Hydrangea macrophylla HOM05D006240 ORTHO05D007709 1.1e-49 200.7 173 64.2
TWI36G0187 Tripterygium wilfordii HOM05D006240 ORTHO05D007709 4.0e-49 198.7 167 65.3
Potri.005G253101 Populus trichocarpa HOM05D006240 ORTHO05D007709 1.5e-48 196.8 170 63.5
Manes.13G069200 Manihot esculenta HOM05D006240 ORTHO05D007709 2.0e-48 196.4 171 63.7
Thecc.08G062400 Theobroma cacao HOM05D006240 ORTHO05D007709 1.0e-47 194.1 169 65.7
Actinidia17059 Actinidia chinensis HOM05D006240 ORTHO05D007709 3.8e-47 192.2 168 63.7
CANSAT56G3734 Cannabis sativa HOM05D006240 ORTHO05D007709 8.4e-47 191.0 170 61.8
Sabra05G0196300 Salix brachista HOM05D006240 ORTHO05D007709 1.1e-46 190.7 167 62.3
Ciclev10002499m.g Citrus clementina HOM05D006240 ORTHO05D007709 1.9e-46 189.9 170 63.5
vmacro21788 Vaccinium macrocarpon HOM05D006240 ORTHO05D007709 2.5e-46 189.5 172 61.0
Lj4C7G6 Lonicera japonica HOM05D006240 ORTHO05D007709 3.2e-46 189.1 171 62.6
Gohir.A01G103700 Gossypium hirsutum HOM05D006240 ORTHO05D007709 5.5e-46 188.3 172 64.0
Gohir.D01G089000 Gossypium hirsutum HOM05D006240 ORTHO05D007709 5.5e-46 188.3 172 64.0
Gorai.002G114700 Gossypium raimondii HOM05D006240 ORTHO05D007709 5.5e-46 188.3 172 64.0
Nitab4.5_0006318g0100 Nicotiana tabacum HOM05D006240 ORTHO05D007709 1.2e-45 187.2 169 60.4
Actinidia15507 Actinidia chinensis HOM05D006240 ORTHO05D007709 6.0e-45 184.9 164 63.4
THA.LOC104811476 Tarenaya hassleriana HOM05D006240 ORTHO05D007709 1.3e-44 183.7 166 59.0
Peaxi162Scf00129g00239 Petunia axillaris HOM05D006240 ORTHO05D007709 1.8e-44 183.3 169 58.6
MSTRG.24503 Avicennia marina HOM05D006240 ORTHO05D007709 2.3e-44 183.0 166 59.0
Nn5g31000 Nelumbo nucifera HOM05D006240 ORTHO05D007709 2.3e-44 183.0 200 52.5
Nitab4.5_0000564g0070 Nicotiana tabacum HOM05D006240 ORTHO05D007709 8.7e-44 181.0 168 59.5
PGR031G1135 Punica granatum HOM05D006240 ORTHO05D007709 1.5e-43 180.3 168 60.1
COL.COLO4_07215 Corchorus olitorius HOM05D006240 ORTHO05D007709 2.5e-43 179.5 161 64.0
Duzib041G0618 Durio zibethinus HOM05D006240 ORTHO05D007709 7.4e-43 177.9 164 62.8
MELO3C017040.2 Cucumis melo HOM05D006240 ORTHO05D007709 2.1e-42 176.4 163 61.3
Rhsim06G0005200 Rhododendron simsii HOM05D006240 ORTHO05D007709 8.2e-42 174.5 167 59.9
Aqoxy5G00997 Aquilegia oxysepala HOM05D006240 ORTHO05D007709 1.1e-41 174.1 173 59.0
PGSC0003DMG400001324 Solanum tuberosum HOM05D006240 ORTHO05D007709 1.8e-41 173.3 173 56.6
AL1G33760 Arabidopsis lyrata HOM05D006240 ORTHO05D007709 3.1e-41 172.6 167 58.7
CsaV3_4G037430 Cucumis sativus L. HOM05D006240 ORTHO05D007709 9.0e-41 171.0 163 62.0
Sp1g18470 Schrenkiella parvula HOM05D006240 ORTHO05D007709 2.6e-40 169.5 171 57.9
SGA_v2.0_scaffold54G19646 Striga asiatica HOM05D006240 ORTHO05D007709 2.6e-40 169.5 169 57.4
PSO210G3458 Papaver somniferum HOM05D006240 ORTHO05D007709 3.4e-40 169.1 168 57.1
Sopen02g032680 Solanum pennellii HOM05D006240 ORTHO05D007709 1.3e-39 167.2 166 54.2
AT1G20770 Arabidopsis thaliana HOM05D006240 ORTHO05D007709 5.0e-39 165.2 167 55.1
Sed0018366 Sechium edule HOM05D006240 ORTHO05D007709 5.0e-39 165.2 164 59.1
BcaB03g14301 Brassica carinata HOM05D006240 ORTHO05D007709 6.5e-39 164.9 170 57.6
Carub.0001s2022 Capsella rubella HOM05D006240 ORTHO05D007709 8.4e-39 164.5 171 56.7
CAN.G206.149 Capsicum annuum HOM05D006240 ORTHO05D007709 8.4e-39 164.5 171 52.0
CARHR021210 Cardamine hirsuta HOM05D006240 ORTHO05D007709 1.4e-38 163.7 167 56.3
SalBow6G2548 Salvia bowleyana HOM05D006240 ORTHO05D007709 2.5e-38 162.9 171 52.6
Thhalv10008759m.g Eutrema salsugineum HOM05D006240 ORTHO05D007709 4.2e-38 162.2 169 57.4
BcaB03g12855 Brassica carinata HOM05D006240 ORTHO05D007709 5.5e-38 161.8 169 55.6
C08p20350 Brassica napus HOM05D006240 ORTHO05D007709 5.5e-38 161.8 169 55.0
BcaC07g39051 Brassica carinata HOM05D006240 ORTHO05D007709 7.1e-38 161.4 167 56.3
BcaC06g34834 Brassica carinata HOM05D006240 ORTHO05D007709 9.3e-38 161.0 167 55.1
C07p22820 Brassica napus HOM05D006240 ORTHO05D007709 9.3e-38 161.0 167 55.1
Migut.M00585 Erythranthe guttata HOM05D006240 ORTHO05D007709 1.2e-37 160.6 166 53.0
CDE04G0018 Ceratophyllum demersum HOM05D006240 ORTHO05D007709 3.5e-37 159.1 175 53.1
BraA08t34862Z Brassica rapa HOM05D006240 ORTHO05D007709 7.9e-37 157.9 172 54.7
A07p15490 Brassica napus HOM05D006240 ORTHO05D007709 1.3e-36 157.1 168 54.8
BraA07t29290Z Brassica rapa HOM05D006240 ORTHO05D007709 1.8e-36 156.8 168 54.8
Cc04_g09300 Coffea canephora HOM05D006240 ORTHO05D007709 2.3e-36 156.4 178 50.6
A08p29270 Brassica napus HOM05D006240 ORTHO05D007709 3.0e-36 156.0 172 54.1
BolC7t42820H Brassica oleracea HOM05D006240 ORTHO05D007709 3.0e-36 156.0 169 54.4
BolC8t49663H Brassica oleracea HOM05D006240 ORTHO05D007709 5.1e-36 155.2 175 53.1
Aa31LG7G4930 Aethionema arabicum HOM05D006240 ORTHO05D007709 1.5e-35 153.7 167 54.5
EL10Ac4g09545 Beta vulgaris HOM05D006240 ORTHO05D007709 1.9e-35 153.3 167 52.1
DCAR_020858 Daucus carota HOM05D001217 ORTHO05D007709 9.7e-35 151.0 171 49.7
FvH4_7g11300 Fragaria vesca HOM05D006240 ORTHO05D007709 9.7e-35 151.0 171 54.4
FAN01G0923 Fragaria x ananassa HOM05D006240 ORTHO05D007709 1.6e-34 150.2 171 54.4
FAN03G2060 Fragaria x ananassa HOM05D006240 ORTHO05D007709 1.6e-34 150.2 171 54.4
FAN10G2738 Fragaria x ananassa HOM05D006240 ORTHO05D007709 1.6e-34 150.2 171 53.8
ClCG11G018840 Citrullus lanatus HOM05D006240 ORTHO05D007709 2.2e-34 149.8 210 48.1
unitig_578.g16237 Utricularia gibba HOM05D006240 ORTHO05D007709 2.2e-34 149.8 166 50.0
RcHm_v2.0_Chr1g0349471 Rosa chinensis HOM05D006240 ORTHO05D007709 2.8e-34 149.4 177 52.5
AUR62035138 Chenopodium quinoa HOM05D006240 ORTHO05D007709 3.7e-34 149.1 175 51.4
PSO170G2591 Papaver somniferum HOM05D006240 ORTHO05D007709 3.7e-34 149.1 163 55.2
Medtr3g115650 Medicago truncatula HOM05D006240 ORTHO05D007709 4.8e-34 148.7 186 51.1
HanXRQChr16g0516421 Helianthus annuus HOM05D006240 ORTHO05D007709 6.3e-34 148.3 168 53.6
MD07G1117600 Malus domestica HOM05D006240 ORTHO05D007709 6.3e-34 148.3 165 53.3
Nn4g24539 Nelumbo nucifera HOM05D006240 ORTHO05D007709 8.2e-34 147.9 168 52.4
Glyma.19G151500 Glycine max HOM05D006240 ORTHO05D007709 1.1e-33 147.5 168 51.8
RcHm_v2.0_Chr7g0215611 Rosa chinensis HOM05D006240 ORTHO05D007709 1.8e-33 146.7 173 53.2
HPP92_012646 Vanilla planifolia HOM05D006240 ORTHO05D007709 1.8e-33 146.7 177 50.3
AUR62042908 Chenopodium quinoa HOM05D006240 ORTHO05D007709 4.1e-33 145.6 175 50.9
Migut.M00223 Erythranthe guttata HOM05D006240 ORTHO05D007709 5.3e-33 145.2 166 49.4
Migut.N02969 Erythranthe guttata HOM05D006240 ORTHO05D007709 6.9e-33 144.8 167 48.5
Lsat_1_v5_gn_2_1920 Lactuca sativa HOM05D006240 ORTHO05D007709 9.0e-33 144.4 166 50.6
Eucgr.K03289 Eucalyptus grandis HOM05D006240 ORTHO05D007709 1.2e-32 144.1 204 44.6
FAN06G3720 Fragaria x ananassa HOM05D006240 ORTHO05D007709 1.2e-32 144.1 171 53.2
Ah.00g001020 Amaranthus hybridus HOM05D006240 ORTHO05D007709 1.5e-32 143.7 171 53.2
Atru.chr9.2231 Acer truncatum HOM05D006240 ORTHO05D007709 2.0e-32 143.3 172 50.6
TPR.G38126 Trifolium pratense HOM05D006240 ORTHO05D007709 2.0e-32 143.3 168 51.2
Psat5g009800 Pisum sativum HOM05D006240 ORTHO05D007709 2.6e-32 142.9 166 51.8
Glyma.03G148200 Glycine max HOM05D006240 ORTHO05D007709 3.4e-32 142.5 166 51.2
Lj1g0026125 Lotus japonicus HOM05D006240 ORTHO05D007709 3.4e-32 142.5 166 51.2
ECA232G5059 Erigeron canadensis HOM05D006240 ORTHO05D007709 1.3e-31 140.6 188 47.9
Phvul.001G146200 Phaseolus vulgaris HOM05D006240 ORTHO05D007709 1.7e-31 140.2 166 49.4
Os04g0509200 Oryza sativa ssp. japonica HOM05D006240 ORTHO05D007709 6.5e-31 138.3 176 46.0
MD02G1098700 Malus domestica HOM05D006240 ORTHO05D007709 1.1e-30 137.5 165 50.3
Ca_15403_v3 Cicer arietinum L. HOM05D006240 ORTHO05D007709 1.4e-30 137.1 168 49.4
Ca_29886_v3 Cicer arietinum L. HOM05D006240 ORTHO05D007709 1.4e-30 137.1 168 49.4
VMungo1383G1920 Vigna mungo HOM05D006240 ORTHO05D007709 1.9e-30 136.7 166 48.8
Lalb_Chr11g0061501 Lupinus albus HOM05D006240 ORTHO05D007709 2.5e-30 136.3 166 49.4
Prupe.2G140800 Prunus persica HOM05D006240 ORTHO05D007709 7.2e-30 134.8 165 49.1
Sc15g0004230 Simmondsia chinensis HOM05D006240 ORTHO05D007709 2.7e-29 132.9 141 54.6
Hund05091 Selenicereus undatus HOM05D006240 ORTHO05D007709 2.5e-27 126.3 178 46.6
Solyc02g087940.4 Solanum lycopersicum HOM05D006240 ORTHO05D007709 1.7e-26 123.6 126 53.2
arahy.Tifrunner.gnm1.ann1.MR2FC0 Arachis hypogaea HOM05D006240 ORTHO05D007709 3.7e-26 122.5 169 47.9
arahy.Tifrunner.gnm1.ann1.W2HKS7 Arachis hypogaea HOM05D006240 ORTHO05D007709 2.9e-23 112.8 168 42.9
SGA_v2.0_scaffold54G19644 Striga asiatica HOM05D006240 ORTHO05D007709 1.9e-22 110.2 230 37.8
Phvul.009G075200 Phaseolus vulgaris HOM05D006240 ORTHO05D007709 1.0e-20 104.4 112 52.7
FAN10G3076 Fragaria x ananassa HOM05D006240 ORTHO05D007709 2.3e-20 103.2 88 60.2
Zm00001eb077760 Zea mays HOM05D006240 ORTHO05D007709 2.8e-18 96.3 119 47.1
ATR0807G014 Amborella trichopoda HOM05D006240 ORTHO05D007709 1.0e-15 87.8 91 52.7
Atru.chr3.2559 Acer truncatum HOM05D006240 ORTHO05D007709 1.4e-12 77.4 171 35.7
SEGI_19917 Sequoiadendron giganteum HOM05D006240 ORTHO05D007709 1.7e-10 70.5 123 39.0
Atru.chr9.2243 Acer truncatum HOM05D006240 ORTHO05D007709 1.4e-09 67.4 46 71.7
SGA_v2.0_scaffold54G19641 Striga asiatica HOM05D005561 ORTHO05D006834 1.8e-09 67.0 87 47.1
Atru.chr9.2228 Acer truncatum HOM05D000343 ORTHO05D000975 3.1e-09 66.2 43 74.4
Mapoly0189s0009 Marchantia polymorpha HOM05D006240 ORTHO05D007709 4.1e-09 65.9 195 29.7
Pp3c17_23460 Physcomitrium patens HOM05D006240 ORTHO05D007709 3.5e-08 62.8 174 31.0


User provided reference genes

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