Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_22743 Corylus avellana HOM05D025300 ORTHO05D005639 1.9e-107 393.3 331 100.0
Cfa014040 Carpinus fangiana HOM05D025300 ORTHO05D005639 4.1e-54 216.1 333 75.1
Cfa014041 Carpinus fangiana HOM05D025300 ORTHO05D005639 4.6e-37 159.5 301 58.1
Cfa014042 Carpinus fangiana HOM05D025300 ORTHO05D005639 7.8e-29 132.1 111 79.3
CSS0003901 Camellia sinensis var. sinensis HOM05D008201 ORTHO05D005639 4.4e-16 89.7 247 42.9
CiPaw.08G071500 Carya illinoinensis HOM05D008201 ORTHO05D005639 1.7e-15 87.8 306 40.5
QL02p013717 Quercus lobata HOM05D008201 ORTHO05D005639 1.4e-14 84.7 387 50.9
TAR376G0148 Trochodendron aralioides HOM05D008201 ORTHO05D005639 9.3e-14 82.0 296 38.5
Potri.005G248100 Populus trichocarpa HOM05D008201 ORTHO05D005639 1.7e-12 77.8 329 42.2
FAN15G2778 Fragaria x ananassa HOM05D008201 ORTHO05D005639 2.1e-10 70.9 356 41.3
Dinv39575 Davidia involucrata HOM05D008201 ORTHO05D005639 4.0e-09 66.6 273 38.1
RcHm_v2.0_Chr6g0304041 Rosa chinensis HOM05D008201 ORTHO05D005639 6.9e-09 65.9 156 48.1
Dinv31918 Davidia involucrata HOM05D008201 ORTHO05D005639 1.5e-08 64.7 288 39.2
Manes.05G140400 Manihot esculenta HOM05D008201 ORTHO05D005639 1.5e-08 64.7 65 56.9
Gohir.A05G181000 Gossypium hirsutum HOM05D008201 ORTHO05D005639 2.6e-08 63.9 62 53.2
FAN27G2977 Fragaria x ananassa HOM05D008201 ORTHO05D005639 4.5e-08 63.2 353 40.5
Gorai.009G189500 Gossypium raimondii HOM05D008201 ORTHO05D005639 5.8e-08 62.8 62 53.2
FvH4_2g37690 Fragaria vesca HOM05D008201 ORTHO05D005639 7.6e-08 62.4 352 41.5
CiPaw.07G140900 Carya illinoinensis HOM05D008201 ORTHO05D005639 9.9e-08 62.0 327 45.6
Duzib041G0568 Durio zibethinus HOM05D008201 ORTHO05D005639 9.9e-08 62.0 54 61.1
Ciclev10002349m.g Citrus clementina HOM05D008201 ORTHO05D005639 1.3e-07 61.6 70 51.4
TWI12G0216 Tripterygium wilfordii HOM05D008201 ORTHO05D005639 1.3e-07 61.6 106 65.1
TAR628G0948 Trochodendron aralioides HOM05D008201 ORTHO05D005639 1.3e-07 61.6 268 38.8
FAN20G0338 Fragaria x ananassa HOM05D008201 ORTHO05D005639 2.9e-07 60.5 350 40.3
Thecc.08G055500 Theobroma cacao HOM05D008201 ORTHO05D005639 2.9e-07 60.5 63 60.3
Aqoxy6G01838 Aquilegia oxysepala HOM05D008201 ORTHO05D005639 3.8e-07 60.1 270 35.2
Oeu016882.1 Olea europaea HOM05D008201 ORTHO05D005639 3.8e-07 60.1 284 35.9
TWI36G0214 Tripterygium wilfordii HOM05D008201 ORTHO05D005639 4.9e-07 59.7 61 59.0
Nn6g31832 Nelumbo nucifera HOM05D008201 ORTHO05D005639 6.4e-07 59.3 36 72.2
Sabra05G0191700 Salix brachista HOM05D008201 ORTHO05D005639 1.1e-06 58.5 68 50.0
Duzib093G2238 Durio zibethinus HOM05D008201 ORTHO05D005639 1.4e-06 58.2 47 57.4
Sed0012310 Sechium edule HOM05D024756 ORTHO05D005639 1.4e-06 58.2 50 64.0
vmacro04391 Vaccinium macrocarpon HOM05D008201 ORTHO05D005639 1.9e-06 57.8 49 65.3
Lj4A14T47 Lonicera japonica HOM05D008201 ORTHO05D005639 2.4e-06 57.4 74 51.4
Duzib116G0781 Durio zibethinus HOM05D008201 ORTHO05D005639 3.2e-06 57.0 63 50.8
Prupe.1G356400 Prunus persica HOM05D008201 ORTHO05D005639 3.2e-06 57.0 308 44.2
HanXRQChr08g0216051 Helianthus annuus HOM05D008201 ORTHO05D005639 4.2e-06 56.6 141 56.0
ECA233G2943 Erigeron canadensis HOM05D002022 ORTHO05D002056 7.1e-06 55.8 66 54.5


User provided reference genes

Program Settings