Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_22639 Corylus avellana HOM05D006392 ORTHO05D008010 9.0e-248 859.8 420 100.0
Cfa013957 Carpinus fangiana HOM05D006392 ORTHO05D008010 1.8e-192 676.0 420 82.6
CiPaw.07G149200 Carya illinoinensis HOM05D006392 ORTHO05D008010 2.4e-176 622.5 421 74.3
QL02p011683 Quercus lobata HOM05D006392 ORTHO05D008010 2.7e-167 592.4 427 68.9
Prupe.1G364700 Prunus persica HOM05D006392 ORTHO05D008010 9.9e-162 573.9 421 68.2
Thecc.08G045200 Theobroma cacao HOM05D006392 ORTHO05D008010 3.2e-160 568.9 429 65.7
CsaV3_3G045910 Cucumis sativus L. HOM05D006392 ORTHO05D008010 3.9e-158 562.0 426 63.8
TWI56G0581 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 6.6e-158 561.2 428 65.7
Duzib093G0848 Durio zibethinus HOM05D006392 ORTHO05D008010 1.6e-156 556.6 429 64.6
Gohir.A01G111000 Gossypium hirsutum HOM05D006392 ORTHO05D008010 4.7e-156 555.1 427 64.6
Cpa.g.sc26.51 Carica papaya HOM05D006392 ORTHO05D008010 1.8e-155 553.1 428 63.8
Gorai.002G123300 Gossypium raimondii HOM05D006392 ORTHO05D008010 6.8e-155 551.2 427 64.6
Gohir.D01G097700 Gossypium hirsutum HOM05D006392 ORTHO05D008010 1.5e-154 550.1 427 64.6
MD15G1011700 Malus domestica HOM05D006392 ORTHO05D008010 9.9e-154 547.4 428 65.7
GSVIVG01009916001 Vitis vinifera HOM05D006392 ORTHO05D008010 4.9e-153 545.0 416 64.9
Eucgr.F01664 Eucalyptus grandis HOM05D006392 ORTHO05D008010 6.4e-153 544.7 426 63.8
Sed0018359 Sechium edule HOM05D006392 ORTHO05D008010 3.2e-152 542.3 419 63.2
MD08G1012700 Malus domestica HOM05D006392 ORTHO05D008010 1.3e-150 537.0 429 64.1
CANSAT25G2040 Cannabis sativa HOM05D006392 ORTHO05D008010 5.1e-150 535.0 428 62.6
Lj6g0002207 Lotus japonicus HOM05D006392 ORTHO05D008010 1.1e-149 533.9 413 64.4
Potri.005G240000 Populus trichocarpa HOM05D006392 ORTHO05D008010 5.6e-149 531.6 427 61.1
Potri.002G021700 Populus trichocarpa HOM05D006392 ORTHO05D008010 1.2e-148 530.4 419 61.3
Lalb_Chr20g0119891 Lupinus albus HOM05D006392 ORTHO05D008010 2.1e-148 529.6 416 62.3
Sabra02G0018100 Salix brachista HOM05D006392 ORTHO05D008010 4.7e-148 528.5 427 60.7
RcHm_v2.0_Chr6g0302911 Rosa chinensis HOM05D006392 ORTHO05D008010 2.4e-147 526.2 412 64.1
Sabra05G0185500 Salix brachista HOM05D006392 ORTHO05D008010 2.4e-147 526.2 419 61.6
Ca_00791_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 9.0e-147 524.2 415 63.4
Glyma.09G103100 Glycine max HOM05D006392 ORTHO05D008010 9.0e-147 524.2 415 63.1
Medtr2g029040 Medicago truncatula HOM05D006392 ORTHO05D008010 9.0e-147 524.2 420 62.4
Phvul.005G022200 Phaseolus vulgaris HOM05D006392 ORTHO05D008010 3.8e-145 518.8 416 63.2
Manes.05G146900 Manihot esculenta HOM05D006392 ORTHO05D008010 6.4e-145 518.1 427 61.1
Hma1.2p1_0638F.1_g193900 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 1.9e-144 516.5 424 60.8
Ca_07152_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 4.2e-144 515.4 418 62.4
PGR083G2660 Punica granatum HOM05D006392 ORTHO05D008010 9.3e-144 514.2 425 60.9
FvH4_2g38390 Fragaria vesca HOM05D006392 ORTHO05D008010 1.2e-143 513.8 420 62.1
Ciclev10001496m.g Citrus clementina HOM05D006392 ORTHO05D008010 1.6e-143 513.5 425 61.2
arahy.Tifrunner.gnm1.ann1.8AJY4P Arachis hypogaea HOM05D006392 ORTHO05D008010 2.7e-143 512.7 405 64.0
arahy.Tifrunner.gnm1.ann1.GAE5DS Arachis hypogaea HOM05D006392 ORTHO05D008010 2.7e-143 512.7 405 64.0
Rhsim06G0021200 Rhododendron simsii HOM05D006392 ORTHO05D008010 2.7e-143 512.7 424 61.1
TAR628G0005 Trochodendron aralioides HOM05D006392 ORTHO05D008010 2.7e-143 512.7 425 61.2
CSS0006206 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 4.6e-143 511.9 424 60.6
CSS0012189 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 4.6e-143 511.9 424 60.6
MSTRG.1188 Avicennia marina HOM05D006392 ORTHO05D008010 7.8e-143 511.1 420 60.7
THA.LOC104809190 Tarenaya hassleriana HOM05D006392 ORTHO05D008010 2.3e-142 509.6 426 60.6
Lj4C23T1 Lonicera japonica HOM05D006392 ORTHO05D008010 6.2e-140 501.5 425 60.7
AL8G18870 Arabidopsis lyrata HOM05D006392 ORTHO05D008010 1.8e-139 500.0 428 57.9
A06p48320 Brassica napus HOM05D006392 ORTHO05D008010 2.4e-139 499.6 419 60.1
TWI36G0533 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 2.4e-139 499.6 406 62.1
PSO675G2043 Papaver somniferum HOM05D006392 ORTHO05D008010 3.1e-139 499.2 423 58.9
PSO541G2958 Papaver somniferum HOM05D006392 ORTHO05D008010 9.0e-139 497.7 423 58.4
BraA06t27702Z Brassica rapa HOM05D006392 ORTHO05D008010 1.5e-138 496.9 419 59.9
CAN.G311.35 Capsicum annuum HOM05D006392 ORTHO05D008010 4.5e-138 495.4 425 59.5
Solyc04g081500.3 Solanum lycopersicum HOM05D006392 ORTHO05D008010 9.9e-138 494.2 425 59.5
PGSC0003DMG400009939 Solanum tuberosum HOM05D006392 ORTHO05D008010 1.3e-137 493.8 425 60.0
VMungo1080G0965 Vigna mungo HOM05D006392 ORTHO05D008010 1.3e-137 493.8 395 62.8
Sopen04g035110 Solanum pennellii HOM05D006392 ORTHO05D008010 1.7e-137 493.4 425 59.5
BcaC06g31757 Brassica carinata HOM05D006392 ORTHO05D008010 1.9e-136 490.0 419 58.7
Oeu014179.1 Olea europaea HOM05D006392 ORTHO05D008010 2.4e-136 489.6 424 59.2
BcaC02g10765 Brassica carinata HOM05D006392 ORTHO05D008010 5.4e-136 488.4 419 58.9
Actinidia21265 Actinidia chinensis HOM05D006392 ORTHO05D008010 9.3e-136 487.6 417 58.5
AT5G42470 Arabidopsis thaliana HOM05D006392 ORTHO05D008010 1.6e-135 486.9 423 57.4
Aqoxy6G00284_Aqoxy6G00285 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 2.7e-135 486.1 422 56.9
ECA233G3412 Erigeron canadensis HOM05D006392 ORTHO05D008010 6.0e-135 485.0 422 58.1
Sp7g07860 Schrenkiella parvula HOM05D006392 ORTHO05D008010 6.0e-135 485.0 429 56.4
C04p25370 Brassica napus HOM05D006392 ORTHO05D008010 1.3e-134 483.8 420 58.8
BolC4t24044H Brassica oleracea HOM05D006392 ORTHO05D008010 1.3e-134 483.8 420 58.8
Migut.C00843 Erythranthe guttata HOM05D006392 ORTHO05D008010 1.3e-134 483.8 416 59.4
HanXRQChr13g0387101 Helianthus annuus HOM05D006392 ORTHO05D008010 3.0e-134 482.6 424 58.5
AUR62033899 Chenopodium quinoa HOM05D006392 ORTHO05D008010 1.1e-133 480.7 419 58.0
Thhalv10003229m.g Eutrema salsugineum HOM05D006392 ORTHO05D008010 1.5e-133 480.3 419 57.0
ATR0810G120 Amborella trichopoda HOM05D006392 ORTHO05D008010 7.4e-133 478.0 431 55.9
Carub.0008s0658 Capsella rubella HOM05D006392 ORTHO05D008010 9.6e-133 477.6 431 56.4
FAN20G2474 Fragaria x ananassa HOM05D006392 ORTHO05D008010 3.1e-131 472.6 419 58.2
FAN15G0959 Fragaria x ananassa HOM05D006392 ORTHO05D008010 4.0e-131 472.2 419 58.0
SalBow7G2189 Salvia bowleyana HOM05D006392 ORTHO05D008010 9.0e-131 471.1 431 55.9
DCAR_023015 Daucus carota HOM05D006392 ORTHO05D008010 3.4e-130 469.2 422 56.2
Lsat_1_v5_gn_8_30701 Lactuca sativa HOM05D006392 ORTHO05D008010 9.9e-130 467.6 424 57.3
EL10Ac1g02188 Beta vulgaris HOM05D006392 ORTHO05D008010 3.8e-129 465.7 402 57.2
FAN27G1073 Fragaria x ananassa HOM05D006392 ORTHO05D008010 3.8e-129 465.7 419 57.3
Duzib116G0836 Durio zibethinus HOM05D006392 ORTHO05D008010 7.9e-127 458.0 430 56.5
Os06g0715600 Oryza sativa ssp. japonica HOM05D006392 ORTHO05D008010 6.2e-124 448.4 419 53.2
Aa31LG9G12590 Aethionema arabicum HOM05D006392 ORTHO05D008010 1.8e-123 446.8 398 55.5
Psat1g169520 Pisum sativum HOM05D006392 ORTHO05D008010 1.0e-121 441.0 366 61.5
SGA_v2.0_scaffold11G05922 Striga asiatica HOM05D006392 ORTHO05D008010 1.0e-121 441.0 421 53.9
Nitab4.5_0013390g0010 Nicotiana tabacum HOM05D006392 ORTHO05D008010 8.4e-121 438.0 425 54.6
Zm00001eb228060 Zea mays HOM05D006392 ORTHO05D008010 2.5e-117 426.4 427 51.1
Hund05186 Selenicereus undatus HOM05D006392 ORTHO05D008010 1.1e-115 421.0 426 53.1
Eucgr.F02661 Eucalyptus grandis HOM05D006392 ORTHO05D008010 2.0e-114 416.8 351 60.4
Sc02g0008600 Simmondsia chinensis HOM05D006392 ORTHO05D008010 2.0e-114 416.8 367 57.5
AUR62041903 Chenopodium quinoa HOM05D006392 ORTHO05D008010 1.0e-113 414.5 419 52.0
Nn1g05904 Nelumbo nucifera HOM05D006392 ORTHO05D008010 1.7e-113 413.7 417 51.1
SEGI_16132 Sequoiadendron giganteum HOM05D006392 ORTHO05D008010 1.7e-113 413.7 419 49.4
MD11G1014100 Malus domestica HOM05D006392 ORTHO05D008010 1.4e-112 410.6 326 65.3
CDE04G0374 Ceratophyllum demersum HOM05D006392 ORTHO05D008010 3.2e-112 409.5 421 50.8
Peaxi162Scf00438g00835 Petunia axillaris HOM05D006392 ORTHO05D008010 1.3e-110 404.1 425 52.5
MBI05_g07507_MAGBIO Magnolia biondii HOM05D006392 ORTHO05D008010 8.8e-110 401.4 396 53.3
Dinv31849 Davidia involucrata HOM05D006392 ORTHO05D008010 4.3e-109 399.1 344 59.6
Hma1.2p1_0638F.1_g193910 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 4.3e-109 399.1 447 49.0
HPP92_024091 Vanilla planifolia HOM05D006392 ORTHO05D008010 8.2e-108 394.8 430 49.1
TPR.G17497 Trifolium pratense HOM05D006392 ORTHO05D008010 3.4e-106 389.4 305 64.9
Actinidia35835 Actinidia chinensis HOM05D006392 ORTHO05D008010 1.0e-105 387.9 418 51.2
COL.COLO4_26140 Corchorus olitorius HOM05D006392 ORTHO05D008010 3.8e-105 386.0 335 58.8
MELO3C030484.2 Cucumis melo HOM05D006392 ORTHO05D008010 2.4e-99 366.7 444 48.4
Glyma.15G275100 Glycine max HOM05D006392 ORTHO05D008010 6.5e-97 358.6 225 76.4
vmacro07583 Vaccinium macrocarpon HOM05D006392 ORTHO05D008010 3.7e-92 342.8 352 52.3
unitig_32.g11136 Utricularia gibba HOM05D006392 ORTHO05D008010 3.8e-89 332.8 329 53.2
Actinidia16990 Actinidia chinensis HOM05D006392 ORTHO05D004187 4.4e-85 319.3 301 55.1
CARHR181930 Cardamine hirsuta HOM05D006392 ORTHO05D008010 9.7e-85 318.2 218 68.3
Atru.chr13.285 Acer truncatum HOM05D006392 ORTHO05D008010 3.1e-83 313.2 387 45.0
AagrBONN_evm.TU.Sc2ySwM_117.3435 Anthoceros agrestis HOM05D006392 ORTHO05D008010 1.3e-81 307.8 409 40.8
Mapoly0064s0103 Marchantia polymorpha HOM05D006392 ORTHO05D008010 1.7e-81 307.4 432 38.7
Pp3c4_9730 Physcomitrium patens HOM05D006392 ORTHO05D008010 8.5e-81 305.1 417 41.0
SMO196G0156 Selaginella moellendorffii HOM05D006392 ORTHO05D008010 1.5e-80 304.3 416 39.7
Cc10_g01630 Coffea canephora HOM05D006392 ORTHO05D008010 6.1e-71 272.3 183 69.4
CBR_g23034 Chara braunii HOM05D006392 ORTHO05D008010 1.7e-60 237.7 433 31.9
Cc10_g01620 Coffea canephora HOM05D006392 ORTHO05D008010 9.5e-56 221.9 235 50.2
Aqoxy4G01015 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 4.0e-46 189.9 210 47.6
Ah.11g039750 Amaranthus hybridus HOM05D006392 ORTHO05D008010 2.1e-42 177.6 149 60.4
RcHm_v2.0_Chr4g0398161 Rosa chinensis HOM05D006392 ORTHO05D008010 8.7e-33 145.6 86 83.7
RcHm_v2.0_Chr4g0398171 Rosa chinensis HOM05D006392 ORTHO05D008010 2.8e-31 140.6 116 58.6
TPR.G29580 Trifolium pratense HOM05D006392 ORTHO05D008010 5.3e-30 136.3 111 57.7
Actinidia27159 Actinidia chinensis HOM05D006392 ORTHO05D008010 3.0e-25 120.6 242 35.1
ClCG05G018230 Citrullus lanatus HOM05D006392 ORTHO05D008010 1.2e-13 82.0 46 76.1
Cre09.g401367 Chlamydomonas reinhardtii HOM05D006392 ORTHO05D008010 4.2e-11 73.6 138 35.5
Zm00001eb340150 Zea mays HOM05D006392 ORTHO05D008010 1.5e-08 65.1 123 33.3


User provided reference genes

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