Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_22630 Corylus avellana HOM05D007378 ORTHO05D007577 0.0e+00 1342.4 695 100.0
Cfa013945 Carpinus fangiana HOM05D007378 ORTHO05D007577 0.0e+00 1257.3 695 94.4
QL02p011519 Quercus lobata HOM05D007378 ORTHO05D007577 5.3e-245 851.3 780 63.7
CiPaw.07G150400 Carya illinoinensis HOM05D007378 ORTHO05D007577 5.5e-210 734.9 666 65.6
CiPaw.08G066200 Carya illinoinensis HOM05D007378 ORTHO05D007577 4.9e-190 668.7 750 54.9
Prupe.1G365800 Prunus persica HOM05D007378 ORTHO05D007577 1.1e-165 587.8 783 47.5
Dinv31841 Davidia involucrata HOM05D007378 ORTHO05D007577 4.7e-161 572.4 765 49.9
Thecc.08G043900 Theobroma cacao HOM05D007378 ORTHO05D007577 1.5e-154 550.8 808 46.3
MD15G1012700 Malus domestica HOM05D007378 ORTHO05D007577 2.7e-148 530.0 779 46.0
Duzib093G0923 Durio zibethinus HOM05D007378 ORTHO05D007577 3.3e-146 523.1 818 45.4
MD08G1013300 Malus domestica HOM05D007378 ORTHO05D007577 9.6e-146 521.5 779 44.8
Dinv39514 Davidia involucrata HOM05D007378 ORTHO05D007577 3.1e-144 516.5 706 48.2
COL.COLO4_26152 Corchorus olitorius HOM05D007378 ORTHO05D007577 3.2e-141 506.5 813 44.5
TWI12G0183 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 7.9e-140 501.9 812 43.7
Ciclev10000382m.g Citrus clementina HOM05D007378 ORTHO05D007577 2.5e-138 496.9 791 46.0
Potri.005G238800 Populus trichocarpa HOM05D007378 ORTHO05D007577 7.6e-135 485.3 801 45.8
GSVIVG01009901001 Vitis vinifera HOM05D007378 ORTHO05D007577 1.3e-134 484.6 645 50.4
TWI36G1616 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 6.5e-134 482.3 811 43.2
TWI56G0017 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 2.5e-125 453.8 725 44.4
FvH4_2g38520 Fragaria vesca HOM05D007378 ORTHO05D007577 9.3e-125 451.8 775 40.6
RcHm_v2.0_Chr6g0302801 Rosa chinensis HOM05D007378 ORTHO05D007577 2.1e-124 450.7 780 40.0
Cpa.g.sc26.38 Carica papaya HOM05D007378 ORTHO05D007577 6.1e-124 449.1 743 44.3
Potri.002G022800 Populus trichocarpa HOM05D007378 ORTHO05D007577 1.0e-123 448.4 806 43.8
Duzib116G0067 Durio zibethinus HOM05D007378 ORTHO05D007577 3.9e-123 446.4 703 45.8
Manes.05G147800 Manihot esculenta HOM05D007378 ORTHO05D007577 5.1e-123 446.0 709 44.9
Manes.18G013740 Manihot esculenta HOM05D007378 ORTHO05D007577 2.4e-120 437.2 753 44.0
FAN15G3724 Fragaria x ananassa HOM05D007378 ORTHO05D007577 7.7e-119 432.2 813 38.7
Sabra02G0018600 Salix brachista HOM05D007378 ORTHO05D007577 3.2e-117 426.8 763 43.9
Atru.chr13.296 Acer truncatum HOM05D007378 ORTHO05D007577 5.5e-117 426.0 565 51.0
FAN27G0575 Fragaria x ananassa HOM05D007378 ORTHO05D007577 7.2e-117 425.6 782 39.5
Hma1.2p1_0023F.1_g015450 Hydrangea macrophylla HOM05D007378 ORTHO05D007577 2.7e-116 423.7 730 43.2
TAR381G0696 Trochodendron aralioides HOM05D007378 ORTHO05D007577 6.7e-115 419.1 672 43.0
CSS0021578 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 9.7e-114 415.2 810 41.6
FAN20G0665 Fragaria x ananassa HOM05D007378 ORTHO05D007577 5.9e-111 406.0 727 39.6
Sabra05G0184500 Salix brachista HOM05D007378 ORTHO05D007577 1.1e-109 401.7 807 40.5
CANSAT25G3202 Cannabis sativa HOM05D007378 ORTHO05D007577 1.6e-92 344.7 737 39.3
MBI05_g30742_MAGBIO Magnolia biondii HOM05D007378 ORTHO05D007577 4.1e-88 330.1 765 37.5
Glyma.14G219000 Glycine max HOM05D007378 ORTHO05D007577 1.6e-87 328.2 724 37.8
Glyma.04G024500 Glycine max HOM05D007378 ORTHO05D007577 2.7e-87 327.4 751 37.4
VMungo0647G1459 Vigna mungo HOM05D007378 ORTHO05D007577 4.5e-87 326.6 732 36.7
arahy.Tifrunner.gnm1.ann1.WP2VUZ Arachis hypogaea HOM05D007378 ORTHO05D007577 1.7e-86 324.7 750 36.8
arahy.Tifrunner.gnm1.ann1.KUKA7T Arachis hypogaea HOM05D007378 ORTHO05D007577 1.5e-85 321.6 749 36.6
Glyma.06G024600 Glycine max HOM05D007378 ORTHO05D007577 9.5e-85 318.9 747 37.1
Eucgr.F00598 Eucalyptus grandis HOM05D007378 ORTHO05D007577 3.6e-84 317.0 784 37.1
Phvul.001G006800 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 2.3e-83 314.3 730 37.3
Actinidia15419 Actinidia chinensis HOM05D007378 ORTHO05D007577 3.0e-83 313.9 767 36.4
Lj1g0027004 Lotus japonicus HOM05D007378 ORTHO05D007577 4.4e-82 310.1 770 36.1
Glyma.17G258000 Glycine max HOM05D007378 ORTHO05D007577 2.8e-81 307.4 723 36.0
Phvul.009G016700 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 2.0e-79 301.2 741 37.0
Lalb_Chr11g0061931 Lupinus albus HOM05D007378 ORTHO05D007577 1.0e-78 298.9 732 35.2
Rhsim07G0247100 Rhododendron simsii HOM05D007378 ORTHO05D007577 1.7e-78 298.1 707 36.5
Actinidia16984 Actinidia chinensis HOM05D007378 ORTHO05D007577 8.6e-78 295.8 655 38.0
vmacro21724 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 7.0e-72 276.2 573 39.8
VMungo1309G2950 Vigna mungo HOM05D007378 ORTHO05D007577 5.9e-71 273.1 773 34.2
Ca_15483_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 1.1e-69 268.9 742 32.6
Lj5g0002996 Lotus japonicus HOM05D007378 ORTHO05D007577 1.9e-69 268.1 742 33.8
Nn5g30152 Nelumbo nucifera HOM05D007378 ORTHO05D007577 7.3e-69 266.2 646 36.2
TPR.G34540 Trifolium pratense HOM05D007378 ORTHO05D007577 2.1e-68 264.6 771 32.7
Cc10_g01700 Coffea canephora HOM05D007378 ORTHO05D007577 1.0e-67 262.3 711 32.9
Ca_13427_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 2.4e-64 251.1 715 34.1
DCAR_013867 Daucus carota HOM05D007378 ORTHO05D007577 1.9e-61 241.5 730 31.2
Psat5g013200 Pisum sativum HOM05D007378 ORTHO05D007577 3.3e-61 240.7 728 33.8
Hund05208 Selenicereus undatus HOM05D007378 ORTHO05D007577 1.6e-60 238.4 763 31.5
Lalb_Chr08g0246161 Lupinus albus HOM05D007378 ORTHO05D007577 2.8e-60 237.7 646 34.4
Medtr3g113840 Medicago truncatula HOM05D007378 ORTHO05D007577 2.8e-60 237.7 745 33.3
Duzib041G0240 Durio zibethinus HOM05D007378 ORTHO05D007577 5.2e-59 233.4 310 49.7
Aqoxy5G01785 Aquilegia oxysepala HOM05D007378 ORTHO05D007577 2.0e-58 231.5 726 32.8
PGR031G0679 Punica granatum HOM05D007378 ORTHO05D007577 4.4e-58 230.3 735 32.8
CAN.G311.27 Capsicum annuum HOM05D007378 ORTHO05D007577 1.7e-57 228.4 689 32.9
Peaxi162Scf00438g00718 Petunia axillaris HOM05D007378 ORTHO05D007577 1.4e-56 225.3 692 31.1
Duzib041G0283 Durio zibethinus HOM05D007378 ORTHO05D007577 2.4e-56 224.6 376 44.7
CSS0010969 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 9.2e-56 222.6 421 38.5
Medtr1g025180 Medicago truncatula HOM05D007378 ORTHO05D007577 1.6e-55 221.9 720 32.1
Sc15g0005020 Simmondsia chinensis HOM05D007378 ORTHO05D007577 2.1e-55 221.5 743 29.9
Sopen04g035030 Solanum pennellii HOM05D007378 ORTHO05D007577 2.1e-55 221.5 688 33.0
PGSC0003DMG400009935 Solanum tuberosum HOM05D007378 ORTHO05D007577 2.1e-55 221.5 681 31.7
Solyc04g081420.4 Solanum lycopersicum HOM05D007378 ORTHO05D007577 6.0e-55 219.9 687 32.8
TPR.G26373 Trifolium pratense HOM05D007378 ORTHO05D007577 7.8e-55 219.5 718 30.6
Nitab4.5_0002561g0040 Nicotiana tabacum HOM05D007378 ORTHO05D007577 1.0e-54 219.2 688 31.5
CSS0024961 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 3.0e-54 217.6 337 47.5
CSS0029124 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 2.3e-51 208.0 305 48.5
PSO700G0360 Papaver somniferum HOM05D007378 ORTHO05D007577 3.2e-48 197.6 657 33.5
PSO170G0005 Papaver somniferum HOM05D007378 ORTHO05D007577 1.5e-45 188.7 618 32.8
Psat6g003040 Pisum sativum HOM05D007378 ORTHO05D007577 2.8e-44 184.5 612 32.7
MSTRG.25246 Avicennia marina HOM05D007378 ORTHO05D007577 1.7e-41 175.3 692 30.5
Oeu020868.1 Olea europaea HOM05D007378 ORTHO05D007577 9.3e-40 169.5 618 29.3
AUR62033831 Chenopodium quinoa HOM05D007378 ORTHO05D007577 8.1e-36 156.4 583 29.2
vmacro04350 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 4.5e-34 150.6 274 40.1
TAR625G0788 Trochodendron aralioides HOM05D000628 ORTHO05D001121 5.8e-34 150.2 208 47.6
SalBow7G4715 Salvia bowleyana HOM05D007378 ORTHO05D007577 9.9e-34 149.4 655 28.9
THA.LOC104814031 Tarenaya hassleriana HOM05D010473 ORTHO05D007577 2.3e-30 138.3 649 28.8
AUR62035752 Chenopodium quinoa HOM05D007378 ORTHO05D007577 3.0e-30 137.9 614 26.5
Lj4A25T50 Lonicera japonica HOM05D007378 ORTHO05D007577 1.9e-29 135.2 270 39.3
Thhalv10018322m.g Eutrema salsugineum HOM05D010473 ORTHO05D007577 3.7e-28 131.0 721 27.6
AT1G75730 Arabidopsis thaliana HOM05D010473 ORTHO05D007577 1.8e-27 128.6 694 28.0
Sp5g30850 Schrenkiella parvula HOM05D010473 ORTHO05D007577 3.4e-26 124.4 727 28.5
Migut.C00828 Erythranthe guttata HOM05D007378 ORTHO05D007577 3.8e-25 120.9 664 27.0
AL2G35720 Arabidopsis lyrata HOM05D010473 ORTHO05D007577 1.9e-24 118.6 727 28.1
Aa31LG4G5960 Aethionema arabicum HOM05D010473 ORTHO05D007577 1.2e-23 115.9 754 26.7
BcaB05g24937 Brassica carinata HOM05D010473 ORTHO05D007577 1.1e-21 109.4 635 27.2
Carub.0002s2258 Capsella rubella HOM05D010473 ORTHO05D007577 6.2e-20 103.6 707 26.6
CARHR069140 Cardamine hirsuta HOM05D010473 ORTHO05D007577 8.2e-20 103.2 719 25.6
Atru.chr13.298 Acer truncatum HOM05D007378 ORTHO05D007577 4.5e-18 97.4 89 60.7
CSS0034917 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 3.2e-16 91.3 116 50.0
A02p20200 Brassica napus HOM05D010473 ORTHO05D007577 7.9e-15 86.7 555 26.1
C02p33740 Brassica napus HOM05D010473 ORTHO05D007577 1.3e-14 85.9 592 26.2
BcaC03g15618 Brassica carinata HOM05D010473 ORTHO05D007577 1.1e-13 82.8 594 26.3
BolC2t09331H Brassica oleracea HOM05D010473 ORTHO05D007577 2.1e-12 78.6 541 25.1
BraA02t07054Z Brassica rapa HOM05D010473 ORTHO05D007577 6.3e-12 77.0 540 26.9
TAR381G0505 Trochodendron aralioides HOM05D007378 ORTHO05D007577 1.2e-10 72.8 102 52.0
BcaC08g47058 Brassica carinata HOM05D010473 ORTHO05D007577 1.5e-10 72.4 160 41.9
ATR0152G004 Amborella trichopoda HOM05D007378 ORTHO05D007577 2.6e-10 71.6 109 44.0
Atru.chr13.297 Acer truncatum HOM05D007378 ORTHO05D007577 4.5e-10 70.9 111 47.7
SGA_v2.0_scaffold92G28233 Striga asiatica HOM05D007378 ORTHO05D007577 1.7e-09 68.9 637 24.5
C06p49680 Brassica napus HOM05D010473 ORTHO05D007577 2.9e-09 68.2 577 25.6
Lsat_1_v5_gn_2_9361 Lactuca sativa HOM05D037282 ORTHO05D035104 2.9e-09 68.2 95 42.1
BolC6t40007H Brassica oleracea HOM05D010473 ORTHO05D007577 4.2e-08 64.3 577 24.6
A07p41260 Brassica napus HOM05D010473 ORTHO05D007577 1.6e-07 62.4 158 40.5
BraA07t31661Z Brassica rapa HOM05D010473 ORTHO05D007577 1.6e-07 62.4 158 40.5
TPR.G31883 Trifolium pratense HOM05D007378 ORTHO05D007577 3.0e-06 58.2 69 44.9


User provided reference genes

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