Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_22626 Corylus avellana HOM05D007355 ORTHO05D009343 6.6e-41 170.2 85 100.0
Cfa013942 Carpinus fangiana HOM05D007355 ORTHO05D009343 3.8e-36 154.5 87 93.1
CiPaw.08G065900 Carya illinoinensis HOM05D007355 ORTHO05D009343 9.6e-32 139.8 92 80.4
QL02p011487 Quercus lobata HOM05D007355 ORTHO05D009343 1.1e-30 136.3 88 79.5
Duzib093G0416 Durio zibethinus HOM05D007355 ORTHO05D009343 9.0e-30 133.3 87 79.3
Thecc.08G043500 Theobroma cacao HOM05D007355 ORTHO05D009343 1.5e-29 132.5 87 78.2
Manes.05G148200 Manihot esculenta HOM05D007355 ORTHO05D009343 2.9e-28 128.3 89 74.2
Ciclev10003277m.g Citrus clementina HOM05D007355 ORTHO05D009343 4.9e-28 127.5 84 77.4
Gohir.D05G189650 Gossypium hirsutum HOM05D007355 ORTHO05D009343 2.4e-27 125.2 88 78.4
Gorai.009G194900 Gossypium raimondii HOM05D007355 ORTHO05D009343 2.4e-27 125.2 88 78.4
COL.COLO4_26156 Corchorus olitorius HOM05D007355 ORTHO05D009343 2.7e-26 121.7 93 73.1
Gohir.A06G004700 Gossypium hirsutum HOM05D007355 ORTHO05D009343 2.7e-26 121.7 85 71.8
Manes.18G014200 Manihot esculenta HOM05D007355 ORTHO05D009343 2.7e-26 121.7 91 70.3
Potri.005G238400 Populus trichocarpa HOM05D007355 ORTHO05D009343 2.7e-26 121.7 85 74.1
VMungo1309G0669 Vigna mungo HOM05D007355 ORTHO05D009343 4.6e-26 120.9 83 75.9
Sabra05G0184200 Salix brachista HOM05D007355 ORTHO05D009343 7.9e-26 120.2 85 72.9
Gohir.D06G000500 Gossypium hirsutum HOM05D007355 ORTHO05D009343 1.0e-25 119.8 85 70.6
Gorai.010G004900 Gossypium raimondii HOM05D007355 ORTHO05D009343 1.0e-25 119.8 85 70.6
Lalb_Chr14g0369841 Lupinus albus HOM05D007355 ORTHO05D009343 1.0e-25 119.8 84 72.6
Gohir.A05G186732 Gossypium hirsutum HOM05D007355 ORTHO05D009343 1.8e-25 119.0 88 76.1
Gorai.009G270200 Gossypium raimondii HOM05D007355 ORTHO05D009343 5.1e-25 117.5 89 73.0
Gohir.A05G257150 Gossypium hirsutum HOM05D007355 ORTHO05D009343 8.7e-25 116.7 89 73.0
PGSC0003DMG400009860 Solanum tuberosum HOM05D007355 ORTHO05D009343 8.7e-25 116.7 98 64.3
Solyc04g081380.1 Solanum lycopersicum HOM05D007355 ORTHO05D009343 1.1e-24 116.3 98 63.3
TAR625G0791 Trochodendron aralioides HOM05D007355 ORTHO05D009343 1.1e-24 116.3 86 70.9
Glyma.06G024800 Glycine max HOM05D007355 ORTHO05D009343 1.5e-24 115.9 83 73.5
PGR083G2600 Punica granatum HOM05D007355 ORTHO05D009343 1.5e-24 115.9 84 70.2
Ca_13424_v3 Cicer arietinum L. HOM05D007355 ORTHO05D009343 4.3e-24 114.4 86 69.8
Ca_13425_v3 Cicer arietinum L. HOM05D007355 ORTHO05D009343 4.3e-24 114.4 86 69.8
Gohir.D05G258650 Gossypium hirsutum HOM05D007355 ORTHO05D009343 4.3e-24 114.4 89 71.9
arahy.Tifrunner.gnm1.ann1.Y2NNQI Arachis hypogaea HOM05D007355 ORTHO05D009343 5.6e-24 114.0 84 72.6
Glyma.04G024700 Glycine max HOM05D007355 ORTHO05D009343 7.4e-24 113.6 83 72.3
arahy.Tifrunner.gnm1.ann1.PADY8Y Arachis hypogaea HOM05D007355 ORTHO05D009343 9.6e-24 113.2 86 70.9
Phvul.009G016500 Phaseolus vulgaris HOM05D007355 ORTHO05D009343 9.6e-24 113.2 83 69.9
Lj5g0016063 Lotus japonicus HOM05D007355 ORTHO05D009343 4.8e-23 110.9 88 63.6
ClCG05G018320 Citrullus lanatus HOM05D007355 ORTHO05D009343 8.2e-23 110.2 86 68.6
CSS0013130 Camellia sinensis var. sinensis HOM05D007355 ORTHO05D009343 1.4e-22 109.4 91 68.1
FAN20G0162 Fragaria x ananassa HOM05D007355 ORTHO05D009343 2.4e-22 108.6 88 65.9
CiPaw.07G150900 Carya illinoinensis HOM05D007355 ORTHO05D009343 3.1e-22 108.2 73 79.5
FAN15G2202 Fragaria x ananassa HOM05D007355 ORTHO05D009343 5.3e-22 107.5 81 69.1
FAN27G0012 Fragaria x ananassa HOM05D007355 ORTHO05D009343 5.3e-22 107.5 81 69.1
SalBow7G4291 Salvia bowleyana HOM05D007355 ORTHO05D009343 6.9e-22 107.1 85 65.9
Cpa.g.sc26.34 Carica papaya HOM05D007355 ORTHO05D009343 1.2e-21 106.3 93 62.4
MELO3C011006.2 Cucumis melo HOM05D007355 ORTHO05D009343 1.2e-21 106.3 88 64.8
MD15G1013100 Malus domestica HOM05D007355 ORTHO05D009343 1.5e-21 105.9 87 62.1
Lj1g0016145 Lotus japonicus HOM05D007355 ORTHO05D009343 3.4e-21 104.8 85 68.2
ClCG08G014360 Citrullus lanatus HOM05D007355 ORTHO05D009343 4.5e-21 104.4 83 66.3
Hma1.2p1_0638F.1_g193820 Hydrangea macrophylla HOM05D007355 ORTHO05D009343 7.6e-21 103.6 91 60.4
Medtr1g025150 Medicago truncatula HOM05D007355 ORTHO05D009343 7.6e-21 103.6 81 67.9
Sed0024841 Sechium edule HOM05D007355 ORTHO05D009343 7.6e-21 103.6 84 67.9
CsaV3_3G045820 Cucumis sativus L. HOM05D007355 ORTHO05D009343 1.3e-20 102.8 76 71.1
CsaV3_2G029470 Cucumis sativus L. HOM05D007355 ORTHO05D009343 2.2e-20 102.1 83 63.9
Atru.chr13.303 Acer truncatum HOM05D007355 ORTHO05D009343 2.9e-20 101.7 77 70.1
Lalb_Chr22g0354351 Lupinus albus HOM05D007355 ORTHO05D009343 4.9e-20 100.9 88 62.5
Prupe.1G366200 Prunus persica HOM05D007355 ORTHO05D009343 4.9e-20 100.9 82 68.3
Sed0019478 Sechium edule HOM05D007355 ORTHO05D009343 4.9e-20 100.9 85 63.5
TPR.G26402 Trifolium pratense HOM05D007355 ORTHO05D009343 2.5e-19 98.6 82 68.3
Actinidia37930 Actinidia chinensis HOM05D007355 ORTHO05D009343 3.2e-19 98.2 78 67.9
Dinv39511 Davidia involucrata HOM05D007355 ORTHO05D009343 3.2e-19 98.2 82 63.4
Sc15g0005040 Simmondsia chinensis HOM05D007355 ORTHO05D009343 7.1e-19 97.1 90 61.1
Nn1g05885 Nelumbo nucifera HOM05D007355 ORTHO05D009343 9.3e-19 96.7 87 62.1
Peaxi162Scf00400g00042 Petunia axillaris HOM05D007355 ORTHO05D009343 1.2e-18 96.3 97 58.8
CAN.G311.23 Capsicum annuum HOM05D007355 ORTHO05D009343 2.1e-18 95.5 67 71.6
Aqoxy5G01778 Aquilegia oxysepala HOM05D007355 ORTHO05D009343 1.3e-17 92.8 88 63.6
MBI05_g15356_MAGBIO Magnolia biondii HOM05D007355 ORTHO05D009343 6.7e-17 90.5 71 69.0
THA.LOC104814032 Tarenaya hassleriana HOM05D007355 ORTHO05D009343 1.9e-16 89.0 90 58.9
Rhsim07G0246800 Rhododendron simsii HOM05D007355 ORTHO05D009343 9.7e-16 86.7 77 58.4
Aa31LG4G5940 Aethionema arabicum HOM05D007355 ORTHO05D009343 2.2e-15 85.5 69 65.2
Nn5g30158 Nelumbo nucifera HOM05D007355 ORTHO05D009343 2.2e-15 85.5 91 60.4
DCAR_017465 Daucus carota HOM05D007355 ORTHO05D009343 2.8e-15 85.1 94 55.3
Migut.C00824 Erythranthe guttata HOM05D007355 ORTHO05D009343 2.8e-15 85.1 103 51.5
Eucgr.F01645 Eucalyptus grandis HOM05D007355 ORTHO05D009343 2.8e-15 85.1 73 67.1
Thhalv10019842m.g Eutrema salsugineum HOM05D007355 ORTHO05D009343 2.8e-15 85.1 71 69.0
Sp1g17750 Schrenkiella parvula HOM05D007355 ORTHO05D009343 4.8e-15 84.3 76 61.8
BcaC08g47049 Brassica carinata HOM05D007355 ORTHO05D009343 6.3e-15 84.0 71 69.0
C06p49660 Brassica napus HOM05D007355 ORTHO05D009343 6.3e-15 84.0 73 69.9
BolC6t40005H Brassica oleracea HOM05D007355 ORTHO05D009343 6.3e-15 84.0 73 69.9
BcaC07g39013 Brassica carinata HOM05D007355 ORTHO05D009343 2.4e-14 82.0 79 60.8
A08p29560 Brassica napus HOM05D007355 ORTHO05D009343 2.4e-14 82.0 79 60.8
C08p19840 Brassica napus HOM05D007355 ORTHO05D009343 2.4e-14 82.0 79 60.8
BolC8t49623H Brassica oleracea HOM05D007355 ORTHO05D009343 2.4e-14 82.0 79 60.8
BraA08t34894Z Brassica rapa HOM05D007355 ORTHO05D009343 2.4e-14 82.0 79 60.8
AL1G32690 Arabidopsis lyrata HOM05D007355 ORTHO05D009343 3.1e-14 81.6 75 56.0
A07p41240 Brassica napus HOM05D007355 ORTHO05D009343 3.1e-14 81.6 71 67.6
BraA07t31659Z Brassica rapa HOM05D007355 ORTHO05D009343 3.1e-14 81.6 71 67.6
CARHR020450 Cardamine hirsuta HOM05D007355 ORTHO05D009343 4.1e-14 81.3 76 61.8
BcaB03g14421 Brassica carinata HOM05D007355 ORTHO05D009343 6.9e-14 80.5 76 59.2
Thhalv10009918m.g Eutrema salsugineum HOM05D007355 ORTHO05D009343 6.9e-14 80.5 77 61.0
BcaB02g07039 Brassica carinata HOM05D007355 ORTHO05D009343 9.0e-14 80.1 74 67.6
DCAR_013865 Daucus carota HOM05D007355 ORTHO05D009343 2.0e-13 79.0 96 50.0
Carub.0001s1949 Capsella rubella HOM05D007355 ORTHO05D009343 3.4e-13 78.2 73 57.5
Lsat_1_v5_gn_2_9841 Lactuca sativa HOM05D007355 ORTHO05D009343 3.4e-13 78.2 95 48.4
Ah.11g039070 Amaranthus hybridus HOM05D007355 ORTHO05D009343 4.5e-13 77.8 77 55.8
BcaB03g14350 Brassica carinata HOM05D007355 ORTHO05D009343 7.7e-13 77.0 73 56.2
BcaC08g45561 Brassica carinata HOM05D007355 ORTHO05D009343 1.3e-12 76.3 74 63.5
AL2G35700 Arabidopsis lyrata HOM05D007355 ORTHO05D009343 2.2e-12 75.5 71 62.0
SGA_v2.0_scaffold92G28242 Striga asiatica HOM05D004656 ORTHO05D005404 2.2e-12 75.5 79 57.0
CARHR069120 Cardamine hirsuta HOM05D007355 ORTHO05D009343 2.9e-12 75.1 75 62.7
AT1G75717 Arabidopsis thaliana HOM05D007355 ORTHO05D009343 6.5e-12 73.9 72 62.5
Carub.0002s2256 Capsella rubella HOM05D007355 ORTHO05D009343 6.5e-12 73.9 87 52.9
C06p32480 Brassica napus HOM05D007355 ORTHO05D009343 1.9e-11 72.4 74 62.2
BolC6t38371H Brassica oleracea HOM05D007355 ORTHO05D009343 1.9e-11 72.4 74 62.2
BcaB03g12886 Brassica carinata HOM05D007355 ORTHO05D009343 2.5e-11 72.0 96 45.8
DCAR_009926 Daucus carota HOM05D007355 ORTHO05D009343 5.1e-09 64.3 85 49.4
ATR0627G001 Amborella trichopoda HOM05D007355 ORTHO05D009343 1.1e-06 56.6 74 45.9


User provided reference genes

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