Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_22533 Corylus avellana HOM05D006275 ORTHO05D007839 7.8e-70 266.9 128 100.0
Cfa013858 Carpinus fangiana HOM05D006275 ORTHO05D007839 3.1e-58 228.4 112 97.3
CiPaw.07G158800 Carya illinoinensis HOM05D006275 ORTHO05D007839 3.4e-49 198.4 113 82.3
Prupe.1G376100 Prunus persica HOM05D006275 ORTHO05D007839 1.3e-48 196.4 107 83.2
CsaV3_3G045380 Cucumis sativus L. HOM05D006275 ORTHO05D007839 1.9e-47 192.6 105 82.9
Gohir.D05G195400 Gossypium hirsutum HOM05D006275 ORTHO05D007839 4.2e-47 191.4 106 83.0
Gorai.009G200300 Gossypium raimondii HOM05D006275 ORTHO05D007839 4.2e-47 191.4 106 83.0
GSVIVG01009748001 Vitis vinifera HOM05D006275 ORTHO05D007839 4.2e-47 191.4 111 82.9
MD15G1023800 Malus domestica HOM05D006275 ORTHO05D007839 5.5e-47 191.0 107 80.4
MELO3C003811.2 Cucumis melo HOM05D006275 ORTHO05D007839 7.1e-47 190.7 105 81.9
Thecc.08G031000 Theobroma cacao HOM05D006275 ORTHO05D007839 7.1e-47 190.7 110 80.9
MD08G1027600 Malus domestica HOM05D006275 ORTHO05D007839 2.7e-46 188.7 103 83.5
Gohir.A05G192200 Gossypium hirsutum HOM05D006275 ORTHO05D007839 3.5e-46 188.3 106 81.1
ClCG05G018790 Citrullus lanatus HOM05D006275 ORTHO05D007839 4.6e-46 188.0 107 80.4
Sed0006872 Sechium edule HOM05D006275 ORTHO05D007839 2.3e-45 185.7 103 81.6
CSS0002686 Camellia sinensis var. sinensis HOM05D000817 ORTHO05D000702 3.0e-45 185.3 105 81.0
CSS0030866 Camellia sinensis var. sinensis HOM05D000817 ORTHO05D000702 3.0e-45 185.3 105 81.0
RcHm_v2.0_Chr6g0301461 Rosa chinensis HOM05D006275 ORTHO05D007839 3.9e-45 184.9 107 78.5
COL.COLO4_26271 Corchorus olitorius HOM05D006275 ORTHO05D007839 6.7e-45 184.1 100 81.0
Duzib093G0437 Durio zibethinus HOM05D006275 ORTHO05D007839 8.7e-45 183.7 107 78.5
Sc02g0005820 Simmondsia chinensis HOM05D006275 ORTHO05D007839 1.1e-44 183.3 101 82.2
Cpa.g.c33902 Carica papaya HOM05D006275 ORTHO05D007839 1.5e-44 183.0 112 75.9
Sabra02G0026900 Salix brachista HOM05D006275 ORTHO05D007839 1.5e-44 183.0 114 71.9
Atru.chr13.432 Acer truncatum HOM05D006275 ORTHO05D007839 1.9e-44 182.6 121 71.1
TAR628G1199 Trochodendron aralioides HOM05D006275 ORTHO05D007839 2.5e-44 182.2 106 82.1
Dinv39443 Davidia involucrata HOM05D006275 ORTHO05D007839 3.3e-44 181.8 112 75.9
FAN15G2697 Fragaria x ananassa HOM05D006275 ORTHO05D007839 3.3e-44 181.8 105 79.0
FAN27G1059 Fragaria x ananassa HOM05D006275 ORTHO05D007839 3.3e-44 181.8 105 79.0
Manes.05G156800 Manihot esculenta HOM05D006275 ORTHO05D007839 7.4e-44 180.6 110 78.2
arahy.Tifrunner.gnm1.ann1.RSD13X Arachis hypogaea HOM05D006275 ORTHO05D007839 9.7e-44 180.3 111 74.8
arahy.Tifrunner.gnm1.ann1.T5GRUU Arachis hypogaea HOM05D006275 ORTHO05D007839 9.7e-44 180.3 111 74.8
CANSAT56G0974 Cannabis sativa HOM05D006275 ORTHO05D007839 9.7e-44 180.3 110 75.5
FvH4_2g39490 Fragaria vesca HOM05D006275 ORTHO05D007839 9.7e-44 180.3 105 78.1
Potri.002G033300 Populus trichocarpa HOM05D006275 ORTHO05D007839 9.7e-44 180.3 114 71.1
Ciclev10002669m.g Citrus clementina HOM05D006275 ORTHO05D007839 1.3e-43 179.9 102 79.4
Phvul.001G012400 Phaseolus vulgaris HOM05D006275 ORTHO05D007839 1.6e-43 179.5 102 80.4
EL10Ac1g00643 Beta vulgaris HOM05D006275 ORTHO05D007839 3.7e-43 178.3 99 77.8
Medtr1g022450 Medicago truncatula HOM05D006275 ORTHO05D007839 3.7e-43 178.3 102 78.4
TWI36G0893 Tripterygium wilfordii HOM05D006275 ORTHO05D007839 8.2e-43 177.2 106 76.4
VMungo0647G0412 Vigna mungo HOM05D006275 ORTHO05D007839 1.1e-42 176.8 102 78.4
Eucgr.F01878 Eucalyptus grandis HOM05D006275 ORTHO05D007839 1.4e-42 176.4 103 77.7
AUR62014497 Chenopodium quinoa HOM05D006275 ORTHO05D007839 1.8e-42 176.0 99 78.8
Thhalv10019294m.g Eutrema salsugineum HOM05D006275 ORTHO05D007839 1.8e-42 176.0 100 77.0
Ah.05g177020 Amaranthus hybridus HOM05D006275 ORTHO05D007839 2.4e-42 175.6 103 79.6
BcaC02g12477 Brassica carinata HOM05D006275 ORTHO05D007839 2.4e-42 175.6 100 78.0
BcaC08g47361 Brassica carinata HOM05D006275 ORTHO05D007839 2.4e-42 175.6 100 77.0
A05p02860 Brassica napus HOM05D006275 ORTHO05D007839 2.4e-42 175.6 100 78.0
A07p40910 Brassica napus HOM05D006275 ORTHO05D007839 2.4e-42 175.6 100 77.0
C04p03490 Brassica napus HOM05D006275 ORTHO05D007839 2.4e-42 175.6 100 78.0
C06p49340 Brassica napus HOM05D006275 ORTHO05D007839 2.4e-42 175.6 100 77.0
BolC4t21983H Brassica oleracea HOM05D006275 ORTHO05D007839 2.4e-42 175.6 100 78.0
BolC6t39969H Brassica oleracea HOM05D006275 ORTHO05D007839 2.4e-42 175.6 100 77.0
BraA05t19277Z Brassica rapa HOM05D006275 ORTHO05D007839 2.4e-42 175.6 100 78.0
BraA07t31631Z Brassica rapa HOM05D006275 ORTHO05D007839 2.4e-42 175.6 100 77.0
arahy.Tifrunner.gnm1.ann1.W9L06J Arachis hypogaea HOM05D006275 ORTHO05D007839 4.1e-42 174.9 109 72.5
arahy.Tifrunner.gnm1.ann1.WR55YC Arachis hypogaea HOM05D006275 ORTHO05D007839 4.1e-42 174.9 109 72.5
Cc09_g08950 Coffea canephora HOM05D006275 ORTHO05D007839 4.1e-42 174.9 105 76.2
Nn1g04018 Nelumbo nucifera HOM05D006275 ORTHO05D007839 4.1e-42 174.9 103 80.6
AL2G35280 Arabidopsis lyrata HOM05D006275 ORTHO05D007839 6.9e-42 174.1 100 76.0
Carub.0002s2219 Capsella rubella HOM05D006275 ORTHO05D007839 6.9e-42 174.1 100 77.0
AUR62038041 Chenopodium quinoa HOM05D006275 ORTHO05D007839 6.9e-42 174.1 99 78.8
BcaC08g47007 Brassica carinata HOM05D006275 ORTHO05D007839 9.0e-42 173.7 100 75.0
Sp5g30490 Schrenkiella parvula HOM05D006275 ORTHO05D007839 9.0e-42 173.7 100 76.0
Lalb_Chr22g0354641 Lupinus albus HOM05D006275 ORTHO05D007839 1.2e-41 173.3 103 73.8
CARHR068700 Cardamine hirsuta HOM05D006275 ORTHO05D007839 1.5e-41 172.9 122 64.8
Glyma.17G252600 Glycine max HOM05D006275 ORTHO05D007839 1.5e-41 172.9 102 76.5
THA.LOC104811376 Tarenaya hassleriana HOM05D006275 ORTHO05D007839 2.0e-41 172.6 100 80.0
AT1G75350 Arabidopsis thaliana HOM05D006275 ORTHO05D007839 3.4e-41 171.8 110 70.9
PGR031G1371 Punica granatum HOM05D006275 ORTHO05D007839 3.4e-41 171.8 100 76.0
Ca_18049_v3 Cicer arietinum L. HOM05D006275 ORTHO05D007839 4.5e-41 171.4 102 77.5
CSS0039262 Camellia sinensis var. sinensis HOM05D006275 ORTHO05D007839 1.7e-40 169.5 97 79.4
Glyma.14G072400 Glycine max HOM05D006275 ORTHO05D007839 3.8e-40 168.3 102 73.5
Aa31LG4G5560 Aethionema arabicum HOM05D006275 ORTHO05D007839 6.5e-40 167.5 100 74.0
Oeu047769.1 Olea europaea HOM05D006275 ORTHO05D007839 8.5e-40 167.2 99 77.8
Aqoxy5G01584 Aquilegia oxysepala HOM05D006275 ORTHO05D007839 1.1e-39 166.8 105 75.2
Oeu002824.1 Olea europaea HOM05D006275 ORTHO05D007839 1.1e-39 166.8 99 77.8
Psat6g009240 Pisum sativum HOM05D006275 ORTHO05D007839 1.1e-39 166.8 102 75.5
Lj5g0023115 Lotus japonicus HOM05D006275 ORTHO05D007839 1.4e-39 166.4 111 71.2
unitig_46.g17937 Utricularia gibba HOM05D006275 ORTHO05D007839 4.2e-39 164.9 99 75.8
HPP92_009679 Vanilla planifolia HOM05D006275 ORTHO05D007839 9.4e-39 163.7 99 70.7
MSTRG.1264 Avicennia marina HOM05D006275 ORTHO05D007839 1.2e-38 163.3 99 75.8
Peaxi162Scf00140g10025 Petunia axillaris HOM05D006275 ORTHO05D007839 1.6e-38 162.9 90 78.9
SalBow7G2217 Salvia bowleyana HOM05D006275 ORTHO05D007839 4.6e-38 161.4 91 78.0
Migut.J00614 Erythranthe guttata HOM05D006275 ORTHO05D007839 1.0e-37 160.2 99 75.8
Nitab4.5_0003265g0060 Nicotiana tabacum HOM05D006275 ORTHO05D007839 1.0e-37 160.2 101 73.3
Nitab4.5_0009228g0020 Nicotiana tabacum HOM05D006275 ORTHO05D007839 1.0e-37 160.2 101 73.3
TPR.G20152 Trifolium pratense HOM05D006275 ORTHO05D007839 1.0e-37 160.2 94 75.5
PSO731G0021 Papaver somniferum HOM05D006275 ORTHO05D007839 1.4e-37 159.8 106 70.8
PSO764G0160 Papaver somniferum HOM05D006275 ORTHO05D007839 1.8e-37 159.5 106 69.8
HanXRQChr16g0501501 Helianthus annuus HOM05D006275 ORTHO05D007839 3.0e-37 158.7 105 71.4
ATR0568G031 Amborella trichopoda HOM05D006275 ORTHO05D007839 3.9e-37 158.3 99 70.7
Migut.N00484 Erythranthe guttata HOM05D006275 ORTHO05D007839 3.9e-37 158.3 99 69.7
Actinidia37997 Actinidia chinensis HOM05D006275 ORTHO05D007839 6.7e-37 157.5 88 75.0
Lsat_1_v5_gn_4_117720 Lactuca sativa HOM05D006275 ORTHO05D007839 1.1e-36 156.8 102 69.6
CDE02G2235 Ceratophyllum demersum HOM05D006275 ORTHO05D007839 1.5e-36 156.4 99 70.7
CDE06G0798 Ceratophyllum demersum HOM05D006275 ORTHO05D007839 1.5e-36 156.4 99 70.7
Solyc04g080630.4 Solanum lycopersicum HOM05D006275 ORTHO05D007839 2.0e-36 156.0 101 72.3
Sopen04g034220 Solanum pennellii HOM05D006275 ORTHO05D007839 2.0e-36 156.0 101 72.3
HanXRQChr09g0268981 Helianthus annuus HOM05D006275 ORTHO05D007839 2.5e-36 155.6 106 69.8
DCAR_022467 Daucus carota HOM05D006275 ORTHO05D007839 3.3e-36 155.2 96 71.9
ECA232G2653 Erigeron canadensis HOM05D006275 ORTHO05D007839 3.3e-36 155.2 111 65.8
SGA_v2.0_scaffold201G41391 Striga asiatica HOM05D006275 ORTHO05D007839 3.3e-36 155.2 100 71.0
PGSC0003DMG400003696 Solanum tuberosum HOM05D006275 ORTHO05D007839 5.7e-36 154.5 101 72.3
Pp3c4_22510 Physcomitrium patens HOM05D006275 ORTHO05D007839 1.7e-35 152.9 100 71.0
AagrBONN_evm.TU.Sc2ySwM_368.2624 Anthoceros agrestis HOM05D006275 ORTHO05D007839 4.1e-34 148.3 103 66.0
Pp3c3_430 Physcomitrium patens HOM05D006275 ORTHO05D007839 1.2e-33 146.7 115 61.7
Pp3c13_7030 Physcomitrium patens HOM05D006275 ORTHO05D007839 2.0e-33 146.0 100 64.0
vmacro04538 Vaccinium macrocarpon HOM05D006275 ORTHO05D007839 2.6e-33 145.6 121 58.7
FAN20G1429 Fragaria x ananassa HOM05D006275 ORTHO05D007839 3.4e-33 145.2 80 77.5
Mapoly0051s0056 Marchantia polymorpha HOM05D006275 ORTHO05D007839 3.4e-33 145.2 100 65.0
Rhsim07G0241500 Rhododendron simsii HOM05D006275 ORTHO05D007839 1.3e-32 143.3 104 64.4
RhsimUnG0236400 Rhododendron simsii HOM05D006275 ORTHO05D007839 1.3e-32 143.3 104 64.4
QL02p009087 Quercus lobata HOM05D006275 ORTHO05D007839 3.2e-31 138.7 76 84.2
CBR_g52135 Chara braunii HOM05D006275 ORTHO05D007839 2.8e-27 125.6 103 54.4
Duzib041G0262 Durio zibethinus HOM05D006275 ORTHO05D007839 4.8e-27 124.8 77 75.3
SEGI_04934 Sequoiadendron giganteum HOM05D006275 ORTHO05D007839 3.1e-26 122.1 100 57.0
SMO117G0016 Selaginella moellendorffii HOM05D006275 ORTHO05D007839 1.0e-24 117.1 84 54.8
Os01g0633000 Oryza sativa ssp. japonica HOM05D006275 ORTHO05D007839 7.2e-23 110.9 80 56.2
Zm00001eb159080 Zea mays HOM05D006275 ORTHO05D007839 9.4e-23 110.5 70 62.9
Cre08.g365400 Chlamydomonas reinhardtii HOM05D006275 ORTHO05D007839 5.2e-21 104.8 118 46.6
BcaC09g48250 Brassica carinata HOM05D006275 ORTHO05D007839 2.6e-20 102.4 52 80.8
MCO12G376 Micromonas commoda HOM05D006275 ORTHO05D007839 1.4e-18 96.7 98 43.9
TWI56G0783 Tripterygium wilfordii HOM05D006275 ORTHO05D007839 7.7e-17 90.9 58 74.1
Gohir.D12G058400 Gossypium hirsutum HOM05D006275 ORTHO05D007839 1.6e-14 83.2 43 83.7
Gorai.010G176600 Gossypium raimondii HOM05D006275 ORTHO05D007839 6.1e-14 81.3 43 83.7
BcaC05g28396 Brassica carinata HOM05D006275 ORTHO05D003437 4.8e-11 71.6 65 56.9
Sabra05G0177600 Salix brachista HOM05D006275 ORTHO05D007839 2.5e-07 59.3 55 50.9


User provided reference genes

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