Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_22495 Corylus avellana HOM05D006739 ORTHO05D008402 9.5e-105 385.2 255 100.0
Cfa013823 Carpinus fangiana HOM05D006739 ORTHO05D008402 6.6e-98 362.5 255 95.7
CiPaw.08G057600 Carya illinoinensis HOM05D006739 ORTHO05D008402 9.0e-63 245.7 265 75.1
QL12p039876 Quercus lobata HOM05D006739 ORTHO05D008402 1.5e-57 228.4 180 67.2
MD08G1206600 Malus domestica HOM05D006739 ORTHO05D008402 5.0e-53 213.4 182 62.1
RcHm_v2.0_Chr7g0233521 Rosa chinensis HOM05D006739 ORTHO05D008402 1.1e-47 195.7 255 63.5
MD15G1390100 Malus domestica HOM05D006739 ORTHO05D008402 1.5e-46 191.8 178 59.0
Ciclev10000605m.g Citrus clementina HOM05D006739 ORTHO05D008402 2.2e-45 188.0 180 55.0
FAN08G0673 Fragaria x ananassa HOM05D006739 ORTHO05D008402 3.2e-44 184.1 167 58.7
FvH4_5g34030 Fragaria vesca HOM05D006739 ORTHO05D008402 2.7e-43 181.0 167 57.5
FAN18G3137 Fragaria x ananassa HOM05D006739 ORTHO05D008402 2.7e-43 181.0 167 57.5
Prupe.1G539000 Prunus persica HOM05D006739 ORTHO05D008402 1.8e-42 178.3 169 57.4
Eucgr.F02164 Eucalyptus grandis HOM05D006739 ORTHO05D008402 1.1e-41 175.6 180 56.1
CSS0036090 Camellia sinensis var. sinensis HOM05D006739 ORTHO05D008402 2.6e-41 174.5 180 53.3
Hma1.2p1_0010F.1_g006410 Hydrangea macrophylla HOM05D006739 ORTHO05D008402 7.4e-41 172.9 182 56.0
Dinv44882 Davidia involucrata HOM05D006739 ORTHO05D008402 9.7e-41 172.6 170 55.9
Atru.chr13.953 Acer truncatum HOM05D006739 ORTHO05D008402 1.4e-39 168.7 187 54.0
CSS0033703 Camellia sinensis var. sinensis HOM05D006739 ORTHO05D008402 2.2e-37 161.4 171 52.6
TWI56G0071 Tripterygium wilfordii HOM05D006739 ORTHO05D008402 7.2e-36 156.4 170 49.4
Duzib093G0111 Durio zibethinus HOM05D006739 ORTHO05D008402 4.7e-35 153.7 179 49.7
Thecc.08G075400 Theobroma cacao HOM05D006739 ORTHO05D008402 3.0e-34 151.0 168 53.6
Sabra02G0086200 Salix brachista HOM05D006739 ORTHO05D008402 4.0e-34 150.6 169 52.1
TAR628G0153 Trochodendron aralioides HOM05D006739 ORTHO05D008402 5.2e-34 150.2 175 52.0
TAR152G0001 Trochodendron aralioides HOM05D006739 ORTHO05D008402 4.4e-33 147.1 192 47.4
Manes.05G187600 Manihot esculenta HOM05D006739 ORTHO05D008402 9.8e-33 146.0 176 49.4
Potri.002G109500 Populus trichocarpa HOM05D006739 ORTHO05D008402 4.8e-32 143.7 169 53.3
ClCG08G011830 Citrullus lanatus HOM05D006739 ORTHO05D008402 2.2e-29 134.8 164 51.2
VMungo0647G0534 Vigna mungo HOM05D006739 ORTHO05D008402 2.2e-29 134.8 177 47.5
COL.COLO4_35303 Corchorus olitorius HOM05D006739 ORTHO05D008402 2.9e-29 134.4 165 49.7
Rhsim07G0214200 Rhododendron simsii HOM05D006739 ORTHO05D008402 1.1e-28 132.5 170 48.8
Sc15g0003370 Simmondsia chinensis HOM05D006739 ORTHO05D008402 1.5e-28 132.1 104 65.4
THA.LOC104816789 Tarenaya hassleriana HOM05D006739 ORTHO05D008402 2.5e-28 131.3 169 45.6
DCAR_019326 Daucus carota HOM05D006739 ORTHO05D008402 3.2e-28 131.0 177 43.5
EL10Ac1g00466 Beta vulgaris HOM05D006739 ORTHO05D008402 5.5e-28 130.2 169 46.7
Duzib116G0618 Durio zibethinus HOM05D006739 ORTHO05D008402 1.2e-27 129.0 165 46.1
VMungo1309G0048 Vigna mungo HOM05D006739 ORTHO05D008402 1.6e-27 128.6 166 48.2
Nitab4.5_0002667g0060 Nicotiana tabacum HOM05D006739 ORTHO05D008402 2.1e-27 128.3 174 46.6
Phvul.009G145100 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 2.7e-27 127.9 176 46.6
Carub.0001s0928 Capsella rubella HOM05D006739 ORTHO05D008402 3.6e-27 127.5 174 45.4
Migut.N00013 Erythranthe guttata HOM05D006739 ORTHO05D008402 3.6e-27 127.5 173 47.4
Nitab4.5_0002667g0050 Nicotiana tabacum HOM05D006739 ORTHO05D008402 2.3e-26 124.8 169 46.7
MBI16_g36544_MAGBIO Magnolia biondii HOM05D006739 ORTHO05D008402 3.0e-26 124.4 171 46.8
AT1G09900 Arabidopsis thaliana HOM05D006739 ORTHO05D008402 8.8e-26 122.9 172 43.6
VMungo0647G1229 Vigna mungo HOM05D006739 ORTHO05D008402 8.8e-26 122.9 138 49.3
Lsat_1_v5_gn_1_781 Lactuca sativa HOM05D006739 ORTHO05D008402 1.2e-25 122.5 169 46.7
Phvul.008G183900 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 1.2e-25 122.5 138 51.4
Cpa.g.sc177.11 Carica papaya HOM05D006739 ORTHO05D008402 2.0e-25 121.7 132 50.8
MELO3C011106.2 Cucumis melo HOM05D006739 ORTHO05D008402 4.4e-25 120.6 175 45.7
CsaV3_2G030450 Cucumis sativus L. HOM05D006739 ORTHO05D008402 4.4e-25 120.6 171 44.4
Glyma.06G092600 Glycine max HOM05D006739 ORTHO05D008402 4.4e-25 120.6 178 46.6
arahy.Tifrunner.gnm1.ann1.CH37P4 Arachis hypogaea HOM05D006739 ORTHO05D008402 5.7e-25 120.2 191 40.8
ECA247G1663 Erigeron canadensis HOM05D006739 ORTHO05D008402 5.7e-25 120.2 167 43.7
Sp1g08530 Schrenkiella parvula HOM05D006739 ORTHO05D008402 5.7e-25 120.2 172 43.6
Phvul.008G184000 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 9.8e-25 119.4 134 52.2
AL1G20500 Arabidopsis lyrata HOM05D006739 ORTHO05D008402 1.7e-24 118.6 172 43.0
MSTRG.24837 Avicennia marina HOM05D006739 ORTHO05D008402 2.8e-24 117.9 171 45.6
Gorai.010G032500 Gossypium raimondii HOM05D006739 ORTHO05D008402 2.8e-24 117.9 164 45.7
vmacro04630 Vaccinium macrocarpon HOM05D006739 ORTHO05D008402 2.8e-24 117.9 173 45.7
Gohir.A06G030375 Gossypium hirsutum HOM05D006739 ORTHO05D008402 6.3e-24 116.7 164 45.1
TAR381G0861 Trochodendron aralioides HOM05D006739 ORTHO05D008402 6.3e-24 116.7 181 43.6
Aa31LG1G4990 Aethionema arabicum HOM05D006739 ORTHO05D008402 8.3e-24 116.3 170 42.4
Glyma.02G216900 Glycine max HOM05D006739 ORTHO05D008402 8.3e-24 116.3 129 51.2
Ca_05489_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 1.8e-23 115.2 143 48.3
Ca_29619_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 1.8e-23 115.2 143 48.3
Sed0004950 Sechium edule HOM05D006739 ORTHO05D008402 1.8e-23 115.2 93 65.6
Actinidia10267 Actinidia chinensis HOM05D006739 ORTHO05D008402 2.4e-23 114.8 210 49.5
Glyma.14G184200 Glycine max HOM05D006739 ORTHO05D008402 3.1e-23 114.4 132 50.8
Hund26855 Selenicereus undatus HOM05D006739 ORTHO05D008402 3.1e-23 114.4 184 45.1
arahy.Tifrunner.gnm1.ann1.M3C1JT Arachis hypogaea HOM05D006739 ORTHO05D008402 4.1e-23 114.0 191 39.8
Glyma.04G090900 Glycine max HOM05D006739 ORTHO05D008402 4.1e-23 114.0 166 47.0
CARHR009960 Cardamine hirsuta HOM05D006739 ORTHO05D008402 7.0e-23 113.2 171 43.9
Peaxi162Scf01212g00003 Petunia axillaris HOM05D006739 ORTHO05D008402 1.2e-22 112.5 166 42.8
Ah.05g171720 Amaranthus hybridus HOM05D006739 ORTHO05D008402 5.9e-22 110.2 164 42.7
Lj1g0027306 Lotus japonicus HOM05D006739 ORTHO05D008402 1.0e-21 109.4 157 47.8
Actinidia19611 Actinidia chinensis HOM05D006739 ORTHO05D008402 2.3e-21 108.2 156 44.2
DCAR_012846 Daucus carota HOM05D006739 ORTHO05D008402 5.5e-20 103.6 177 39.5
Hund26833 Selenicereus undatus HOM05D006739 ORTHO05D008402 7.2e-20 103.2 166 42.8
Sopen06g003030 Solanum pennellii HOM05D006739 ORTHO05D008402 7.2e-20 103.2 179 38.0
A06p06610 Brassica napus HOM05D006739 ORTHO05D008402 1.6e-19 102.1 168 38.1
Hund26854 Selenicereus undatus HOM05D006739 ORTHO05D008402 2.1e-19 101.7 178 41.6
BcaC05g24834 Brassica carinata HOM05D006739 ORTHO05D008402 3.6e-19 100.9 174 39.1
BraA06t23875Z Brassica rapa HOM05D006739 ORTHO05D008402 4.7e-19 100.5 168 37.5
CANSAT25G1844 Cannabis sativa HOM05D006739 ORTHO05D008402 8.0e-19 99.8 164 39.6
PGSC0003DMG400014713 Solanum tuberosum HOM05D006739 ORTHO05D008402 8.0e-19 99.8 201 37.8
PGSC0003DMG400027357 Solanum tuberosum HOM05D006739 ORTHO05D008402 8.0e-19 99.8 201 37.8
C05p08020 Brassica napus HOM05D006739 ORTHO05D008402 1.0e-18 99.4 168 37.5
Gohir.D06G029600 Gossypium hirsutum HOM05D006739 ORTHO05D008402 1.8e-18 98.6 94 58.5
HanXRQChr11g0324241 Helianthus annuus HOM05D006739 ORTHO05D008402 1.8e-18 98.6 168 38.7
BolC5t29554H Brassica oleracea HOM05D006739 ORTHO05D008402 2.3e-18 98.2 168 36.9
Aqoxy5G01872 Aquilegia oxysepala HOM05D006739 ORTHO05D008402 5.2e-18 97.1 89 53.9
AUR62014385 Chenopodium quinoa HOM05D006739 ORTHO05D008402 6.8e-18 96.7 117 48.7
Oeu020282.1 Olea europaea HOM05D006739 ORTHO05D008402 8.9e-18 96.3 64 65.6
PSO761G0270 Papaver somniferum HOM05D006739 ORTHO05D008402 2.0e-17 95.1 170 38.8
AUR62019126 Chenopodium quinoa HOM05D006739 ORTHO05D008402 3.4e-17 94.4 77 58.4
ATR0800G015 Amborella trichopoda HOM05D006739 ORTHO05D008402 5.7e-17 93.6 120 45.0
PGR042G0142 Punica granatum HOM05D006739 ORTHO05D008402 5.7e-17 93.6 78 60.3
Glyma.14G184300 Glycine max HOM05D006739 ORTHO05D008402 9.8e-17 92.8 196 36.7
PSO700G0042 Papaver somniferum HOM05D006739 ORTHO05D008402 8.3e-16 89.7 113 47.8
Hund26853 Selenicereus undatus HOM05D006739 ORTHO05D008402 2.4e-15 88.2 163 39.3
SalBow5G4649 Salvia bowleyana HOM05D006739 ORTHO05D008402 4.1e-15 87.4 130 44.6
Ca_15539_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 5.4e-15 87.0 90 46.7
CDE04G0064 Ceratophyllum demersum HOM05D006739 ORTHO05D008402 7.3e-12 76.6 96 44.8
CAN.G941.26 Capsicum annuum HOM05D006739 ORTHO05D008402 1.2e-11 75.9 43 79.1
Actinidia19612 Actinidia chinensis HOM05D006739 ORTHO05D008402 3.6e-11 74.3 109 82.6
CDE06G1140 Ceratophyllum demersum HOM05D002753 ORTHO05D003097 4.7e-11 73.9 96 43.8
CDE07G2071 Ceratophyllum demersum HOM05D006739 ORTHO05D008402 1.0e-10 72.8 174 33.9
Hund26842 Selenicereus undatus HOM05D006739 ORTHO05D008402 1.0e-10 72.8 133 42.9
SGA_v2.0_scaffold123G33426 Striga asiatica HOM05D006739 ORTHO05D008402 1.0e-10 72.8 96 45.8
Oeu012210.1 Olea europaea HOM05D006739 ORTHO05D008402 2.3e-10 71.6 37 83.8
Dinv22007 Davidia involucrata HOM05D006739 ORTHO05D008402 4.0e-10 70.9 109 81.7
Cc10_g08260 Coffea canephora HOM05D008425 ORTHO05D010555 6.8e-10 70.1 109 78.0
Psat5g018720 Pisum sativum HOM05D006739 ORTHO05D008402 3.4e-09 67.8 86 48.8
HPP92_004375 Vanilla planifolia HOM05D006739 ORTHO05D008402 4.9e-08 63.9 60 51.7
Phvul.008G151824 Phaseolus vulgaris HOM05D007620 ORTHO05D009568 1.4e-07 62.4 80 43.8
TPR.G12357 Trifolium pratense HOM05D006739 ORTHO05D008402 1.9e-07 62.0 96 37.5
MBI16_g14339_MAGBIO Magnolia biondii HOM05D006739 ORTHO05D008402 2.4e-07 61.6 109 75.2
CDE01G0171 Ceratophyllum demersum HOM05D007620 ORTHO05D009568 3.2e-07 61.2 57 43.9
TPR.G15758 Trifolium pratense HOM05D000069 ORTHO05D001849 4.1e-07 60.8 60 46.7
VMungo0720G2663 Vigna mungo HOM05D007620 ORTHO05D009568 7.0e-07 60.1 80 41.2
Glyma.20G222800 Glycine max HOM05D007620 ORTHO05D009568 9.2e-07 59.7 83 38.6
HPP92_004376 Vanilla planifolia HOM05D006739 ORTHO05D008402 2.0e-06 58.5 60 50.0


User provided reference genes

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