Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_22433 Corylus avellana HOM05D006958 ORTHO05D008814 4.1e-201 704.5 353 100.0
Cfa013775 Carpinus fangiana HOM05D006958 ORTHO05D008814 3.0e-188 661.8 343 96.5
CiPaw.07G174600 Carya illinoinensis HOM05D006958 ORTHO05D008814 1.2e-157 560.1 346 81.5
QL12p038133 Quercus lobata HOM05D006958 ORTHO05D008814 6.4e-146 521.2 344 74.7
Atru.chr13.835 Acer truncatum HOM05D006958 ORTHO05D008814 5.6e-134 481.5 343 69.1
Prupe.1G422600 Prunus persica HOM05D006958 ORTHO05D008814 2.1e-133 479.6 344 68.0
Thecc.08G088500 Theobroma cacao HOM05D006958 ORTHO05D008814 8.1e-133 477.6 341 67.4
Ciclev10001733m.g Citrus clementina HOM05D006958 ORTHO05D008814 2.2e-130 469.5 343 67.6
MD15G1069100 Malus domestica HOM05D006958 ORTHO05D008814 8.4e-130 467.6 345 69.6
Manes.18G046700 Manihot esculenta HOM05D006958 ORTHO05D008814 1.4e-129 466.8 345 68.1
CANSAT25G3409 Cannabis sativa HOM05D006958 ORTHO05D008814 3.2e-129 465.7 345 67.2
Duzib093G1923 Durio zibethinus HOM05D006958 ORTHO05D008814 3.2e-129 465.7 341 66.6
TWI12G1073 Tripterygium wilfordii HOM05D006958 ORTHO05D008814 7.1e-129 464.5 346 65.9
COL.COLO4_28503 Corchorus olitorius HOM05D006958 ORTHO05D008814 9.2e-129 464.2 342 66.4
Gorai.009G220300 Gossypium raimondii HOM05D006958 ORTHO05D008814 1.2e-128 463.8 342 65.8
Gohir.D05G213600 Gossypium hirsutum HOM05D006958 ORTHO05D008814 7.8e-128 461.1 343 65.6
TAR376G0445 Trochodendron aralioides HOM05D006958 ORTHO05D008814 2.3e-127 459.5 353 65.4
RcHm_v2.0_Chr6g0309651 Rosa chinensis HOM05D006958 ORTHO05D008814 4.0e-124 448.7 344 65.4
ClCG08G016520 Citrullus lanatus HOM05D006958 ORTHO05D008814 9.9e-123 444.1 346 65.0
Actinidia10201 Actinidia chinensis HOM05D006958 ORTHO05D008814 6.4e-122 441.4 344 65.4
CsaV3_2G026090 Cucumis sativus L. HOM05D006958 ORTHO05D008814 3.5e-120 435.6 344 64.2
Potri.002G118300 Populus trichocarpa HOM05D006958 ORTHO05D008814 3.5e-120 435.6 341 64.2
Dinv39219 Davidia involucrata HOM05D006958 ORTHO05D008814 3.0e-119 432.6 346 63.3
FAN15G0662 Fragaria x ananassa HOM05D006958 ORTHO05D008814 5.1e-119 431.8 347 63.1
FAN27G0228 Fragaria x ananassa HOM05D006958 ORTHO05D008814 1.5e-118 430.3 348 62.6
FvH4_2g33060 Fragaria vesca HOM05D006958 ORTHO05D008814 7.3e-118 427.9 344 63.1
FAN24G2490 Fragaria x ananassa HOM05D006958 ORTHO05D008814 7.3e-118 427.9 348 62.9
Sed0002112 Sechium edule HOM05D006958 ORTHO05D008814 6.2e-117 424.9 343 63.0
MELO3C010802.2 Cucumis melo HOM05D006958 ORTHO05D008814 8.1e-117 424.5 344 62.2
Rhsim06G0062400 Rhododendron simsii HOM05D006958 ORTHO05D008814 1.1e-116 424.1 345 62.9
THA.LOC104816754 Tarenaya hassleriana HOM05D006958 ORTHO05D008814 1.8e-116 423.3 340 62.4
Actinidia22696 Actinidia chinensis HOM05D006958 ORTHO05D008814 2.4e-116 422.9 348 62.1
CSS0020437 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 7.6e-115 417.9 348 62.1
FAN20G1263 Fragaria x ananassa HOM05D006958 ORTHO05D008814 2.2e-114 416.4 360 60.0
Eucgr.F02250 Eucalyptus grandis HOM05D006958 ORTHO05D008814 5.4e-113 411.8 348 57.8
CSS0026693 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 1.6e-109 400.2 348 60.6
Lalb_Chr14g0368181 Lupinus albus HOM05D006958 ORTHO05D008814 2.1e-109 399.8 340 61.5
Thhalv10023590m.g Eutrema salsugineum HOM05D006958 ORTHO05D008814 2.4e-108 396.4 341 59.5
Cpa.g.sc142.28 Carica papaya HOM05D006958 ORTHO05D008814 3.1e-108 396.0 276 69.2
PGR031G1511 Punica granatum HOM05D006958 ORTHO05D008814 3.1e-108 396.0 341 56.9
arahy.Tifrunner.gnm1.ann1.JFD9T8 Arachis hypogaea HOM05D006958 ORTHO05D008814 4.0e-108 395.6 344 60.5
CARHR283790 Cardamine hirsuta HOM05D006958 ORTHO05D008814 6.9e-108 394.8 343 60.3
Gohir.A05G210300 Gossypium hirsutum HOM05D006958 ORTHO05D008814 4.5e-107 392.1 277 69.0
AT1G59600 Arabidopsis thaliana HOM05D006958 ORTHO05D008814 9.9e-107 391.0 340 60.0
Nitab4.5_0002484g0050 Nicotiana tabacum HOM05D006958 ORTHO05D008814 6.4e-106 388.3 344 59.0
AL2G17470 Arabidopsis lyrata HOM05D006958 ORTHO05D008814 1.4e-105 387.1 340 60.0
Carub.0002s0585 Capsella rubella HOM05D006958 ORTHO05D008814 2.7e-104 382.9 341 58.9
Migut.N02783 Erythranthe guttata HOM05D006958 ORTHO05D008814 3.5e-104 382.5 341 57.2
Nitab4.5_0004654g0020 Nicotiana tabacum HOM05D006958 ORTHO05D008814 3.5e-104 382.5 344 58.4
SGA_v2.0_scaffold28G11833 Striga asiatica HOM05D006958 ORTHO05D008814 2.3e-103 379.8 341 58.7
Sp2g04980 Schrenkiella parvula HOM05D006958 ORTHO05D008814 3.0e-103 379.4 342 57.6
Sopen04g031420 Solanum pennellii HOM05D006958 ORTHO05D008814 6.7e-103 378.3 345 58.0
C01p36350 Brassica napus HOM05D006958 ORTHO05D008814 8.7e-103 377.9 338 57.7
Sc02g0007890 Simmondsia chinensis HOM05D006958 ORTHO05D008814 1.1e-102 377.5 339 56.3
Aa31LG2G10550 Aethionema arabicum HOM05D006958 ORTHO05D008814 2.5e-102 376.3 424 49.1
MBI16_g23890_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D008814 3.3e-102 375.9 351 56.4
Solyc04g077820.4 Solanum lycopersicum HOM05D006958 ORTHO05D008814 4.3e-102 375.6 341 57.2
Hund05299 Selenicereus undatus HOM05D006958 ORTHO05D008814 1.3e-101 374.0 349 57.0
TPR.G37796 Trifolium pratense HOM05D006958 ORTHO05D008814 1.6e-101 373.6 344 58.7
BolC1t03593H Brassica oleracea HOM05D006958 ORTHO05D008814 2.1e-101 373.2 339 57.5
A01p28700 Brassica napus HOM05D006958 ORTHO05D008814 1.4e-100 370.5 338 57.4
BraA01t03033Z Brassica rapa HOM05D006958 ORTHO05D008814 1.4e-100 370.5 338 57.7
Lj4A758G77 Lonicera japonica HOM05D006958 ORTHO05D008814 9.0e-100 367.9 383 53.0
Lj5g0000926 Lotus japonicus HOM05D006958 ORTHO05D008814 2.6e-99 366.3 339 56.6
CAN.G724.27 Capsicum annuum HOM05D006958 ORTHO05D008814 2.9e-98 362.8 344 55.8
Ca_13215_v3 Cicer arietinum L. HOM05D006958 ORTHO05D008814 3.8e-98 362.5 345 56.5
MSTRG.24376 Avicennia marina HOM05D006958 ORTHO05D008814 6.5e-98 361.7 342 54.4
PGSC0003DMG400010608 Solanum tuberosum HOM05D006958 ORTHO05D008814 1.1e-97 360.9 354 55.1
BcaB04g20216 Brassica carinata HOM05D006958 ORTHO05D008814 7.9e-96 354.8 342 55.6
arahy.Tifrunner.gnm1.ann1.8TQ0W2 Arachis hypogaea HOM05D006958 ORTHO05D008814 5.1e-95 352.1 343 56.6
HanXRQChr08g0229631 Helianthus annuus HOM05D006958 ORTHO05D008814 8.7e-95 351.3 342 55.0
Peaxi162Scf00081g02114 Petunia axillaris HOM05D006958 ORTHO05D008814 5.7e-94 348.6 343 52.5
PSO541G2153 Papaver somniferum HOM05D006958 ORTHO05D008814 1.6e-93 347.1 351 51.9
Glyma.14G089018 Glycine max HOM05D006958 ORTHO05D008814 4.8e-93 345.5 332 56.9
PSO675G0096 Papaver somniferum HOM05D006958 ORTHO05D008814 1.4e-92 344.0 353 51.0
Lsat_1_v5_gn_6_110920 Lactuca sativa HOM05D006958 ORTHO05D008814 3.1e-92 342.8 355 53.2
ATR0739G011 Amborella trichopoda HOM05D006958 ORTHO05D008814 1.2e-91 340.9 343 52.5
Phvul.001G028000 Phaseolus vulgaris HOM05D006958 ORTHO05D008814 2.6e-91 339.7 333 53.8
Aqoxy6G02602 Aquilegia oxysepala HOM05D006958 ORTHO05D008814 5.0e-90 335.5 345 51.6
Medtr1g018000 Medicago truncatula HOM05D006958 ORTHO05D008814 3.2e-89 332.8 344 53.5
VMungo0647G0836 Vigna mungo HOM05D006958 ORTHO05D008814 5.5e-89 332.0 309 56.0
DCAR_020049 Daucus carota HOM05D006958 ORTHO05D008814 2.7e-88 329.7 336 53.6
EL10Ac1g02379 Beta vulgaris HOM05D006958 ORTHO05D008814 6.1e-88 328.6 276 59.1
PSO541G3524 Papaver somniferum HOM05D006958 ORTHO05D008814 1.8e-87 327.0 339 51.6
unitig_744.g24127 Utricularia gibba HOM05D006958 ORTHO05D008814 5.0e-82 308.9 321 50.8
ECA246G2880 Erigeron canadensis HOM05D006958 ORTHO05D008814 1.9e-81 307.0 283 57.2
HPP92_009523 Vanilla planifolia HOM05D006958 ORTHO05D008814 7.2e-81 305.1 340 48.8
GSVIVG01009341001 Vitis vinifera HOM05D006958 ORTHO05D008814 2.3e-79 300.1 211 69.2
Cc10_g05800 Coffea canephora HOM05D006958 ORTHO05D008814 1.5e-75 287.3 211 69.2
Zm00001eb325900 Zea mays HOM05D006958 ORTHO05D008814 1.9e-73 280.4 341 45.2
CDE04G0359 Ceratophyllum demersum HOM05D006958 ORTHO05D008814 1.9e-57 227.3 249 50.6
Psat6g018160 Pisum sativum HOM05D006958 ORTHO05D008814 1.0e-50 204.9 297 46.1
AUR62022479 Chenopodium quinoa HOM05D006958 ORTHO05D008814 3.2e-49 199.9 175 56.6
Oeu049903.1 Olea europaea HOM05D006958 ORTHO05D008814 8.0e-48 195.3 176 55.7
Pp3c12_1620 Physcomitrium patens HOM05D006958 ORTHO05D008814 1.8e-47 194.1 326 35.3
HPP92_009559 Vanilla planifolia HOM05D006958 ORTHO05D008814 3.3e-41 173.3 185 49.2
arahy.Tifrunner.gnm1.ann1.D1UQZZ Arachis hypogaea HOM05D006958 ORTHO05D008814 1.8e-39 167.5 272 39.7
Cfa010280 Carpinus fangiana HOM05D006958 ORTHO05D008814 8.3e-37 158.7 93 84.9
Os01g0593100 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 2.4e-36 157.1 195 46.7
SMO334G0101 Selaginella moellendorffii HOM05D006958 ORTHO05D008814 1.6e-32 144.4 265 34.0
CBR_g51257 Chara braunii HOM05D006958 ORTHO05D008814 1.2e-30 138.3 331 30.5
Os07g0586000 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 1.7e-29 134.4 169 44.4
BolC4t24190H Brassica oleracea HOM05D006958 ORTHO05D008814 1.4e-28 131.3 132 54.5
SEGI_02529 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 6.0e-27 125.9 165 39.4
MBI15_g25904_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D017181 1.0e-26 125.2 129 55.8
AUR62022480 Chenopodium quinoa HOM05D006958 ORTHO05D008814 1.5e-25 121.3 113 54.9
BcaC02g10644 Brassica carinata HOM05D006958 ORTHO05D008814 4.0e-23 113.2 149 44.3
C04p26140 Brassica napus HOM05D006958 ORTHO05D008814 1.7e-21 107.8 110 52.7
Psat7g107960 Pisum sativum HOM05D006958 ORTHO05D008814 2.3e-18 97.4 107 46.7
SEGI_26692 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 2.8e-16 90.5 87 46.0
Glyma.07G264001 Glycine max HOM05D006958 ORTHO05D008814 2.7e-11 73.9 75 53.3
Ah.09g227430 Amaranthus hybridus HOM05D006958 ORTHO05D008814 1.6e-08 64.7 71 46.5
Nn5g30604 Nelumbo nucifera HOM05D006958 ORTHO05D008814 8.1e-08 62.4 73 47.9
AUR62020930 Chenopodium quinoa HOM05D061994 ORTHO05D138058 1.1e-07 62.0 281 23.8
EL10Ac1g02376 Beta vulgaris HOM05D006958 ORTHO05D008814 3.1e-07 60.5 64 54.7
Psat0s3396g0160 Pisum sativum HOM05D006958 ORTHO05D008814 3.1e-07 60.5 40 65.0


User provided reference genes

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