Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_22429 Corylus avellana HOM05D006323 ORTHO05D007827 8.1e-282 973.0 467 100.0
Cfa013771 Carpinus fangiana HOM05D006323 ORTHO05D007827 4.2e-254 880.9 467 91.4
CiPaw.07G174200 Carya illinoinensis HOM05D006323 ORTHO05D007827 1.8e-220 769.2 469 80.8
QL12p038177 Quercus lobata HOM05D006323 ORTHO05D007827 1.6e-200 703.0 472 74.2
Dinv44950 Davidia involucrata HOM05D006323 ORTHO05D007827 1.2e-192 676.8 461 72.5
ClCG08G016540 Citrullus lanatus HOM05D006323 ORTHO05D007827 1.7e-186 656.4 468 69.4
Hma1.2p1_0819F.1_g223630 Hydrangea macrophylla HOM05D006323 ORTHO05D007827 1.6e-184 649.8 461 70.5
MELO3C010800.2 Cucumis melo HOM05D006323 ORTHO05D007827 7.8e-184 647.5 468 68.4
CsaV3_2G026070 Cucumis sativus L. HOM05D006323 ORTHO05D007827 7.8e-184 647.5 468 68.6
TAR381G0342 Trochodendron aralioides HOM05D006323 ORTHO05D007827 4.7e-181 638.3 464 67.9
TAR381G1608 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.1e-180 637.1 464 67.7
Nn5g30609 Nelumbo nucifera HOM05D006323 ORTHO05D007827 4.9e-178 628.2 462 68.2
Actinidia38108 Actinidia chinensis HOM05D006323 ORTHO05D007827 8.3e-178 627.5 456 69.1
Sed0007452 Sechium edule HOM05D006323 ORTHO05D007827 2.4e-177 625.9 466 66.7
CSS0045238 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 1.3e-175 620.2 459 68.2
CSS0024022 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 2.5e-174 615.9 459 67.8
CSS0010458 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 1.1e-172 610.5 479 66.0
CSS0050369 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 5.2e-172 608.2 477 66.5
Prupe.1G422100 Prunus persica HOM05D006323 ORTHO05D007827 1.4e-169 600.1 464 64.4
arahy.Tifrunner.gnm1.ann1.JK4I75 Arachis hypogaea HOM05D006323 ORTHO05D007827 2.5e-166 589.3 472 62.7
Eucgr.F00088 Eucalyptus grandis HOM05D006323 ORTHO05D007827 1.6e-165 586.6 456 64.0
vmacro22049 Vaccinium macrocarpon HOM05D006323 ORTHO05D007827 1.6e-165 586.6 473 64.5
CANSAT25G0442 Cannabis sativa HOM05D006323 ORTHO05D007827 2.8e-165 585.9 468 63.2
Ca_13213_v3 Cicer arietinum L. HOM05D006323 ORTHO05D007827 2.4e-164 582.8 482 62.2
Cpa.g.sc142.31 Carica papaya HOM05D006323 ORTHO05D007827 2.2e-162 576.2 457 61.3
Psat6g018000 Pisum sativum HOM05D006323 ORTHO05D007827 3.8e-162 575.5 488 60.5
Cpa.g.sc142.34 Carica papaya HOM05D006323 ORTHO05D007827 7.1e-161 571.2 457 60.8
Nitab4.5_0000497g0170 Nicotiana tabacum HOM05D006323 ORTHO05D007827 1.6e-160 570.1 468 60.5
Lalb_Chr14g0368151 Lupinus albus HOM05D006323 ORTHO05D007827 1.0e-159 567.4 474 61.2
Aqoxy6G02596 Aquilegia oxysepala HOM05D006323 ORTHO05D007827 3.9e-159 565.5 471 60.7
Nitab4.5_0003725g0070 Nicotiana tabacum HOM05D006323 ORTHO05D007827 5.1e-159 565.1 464 60.6
PSO675G0675 Papaver somniferum HOM05D006323 ORTHO05D007827 7.3e-158 561.2 485 60.4
Medtr1g017940 Medicago truncatula HOM05D006323 ORTHO05D007827 2.8e-157 559.3 481 59.0
PGR083G0013 Punica granatum HOM05D006323 ORTHO05D007827 2.8e-157 559.3 456 62.3
PSO541G5960 Papaver somniferum HOM05D006323 ORTHO05D007827 8.1e-157 557.8 474 60.8
TWI56G0563 Tripterygium wilfordii HOM05D006323 ORTHO05D007827 1.2e-155 553.9 459 60.3
Rhsim07G0219300 Rhododendron simsii HOM05D006323 ORTHO05D007827 2.0e-155 553.1 464 63.4
Lj5g0017088 Lotus japonicus HOM05D006323 ORTHO05D007827 2.6e-155 552.7 488 60.5
PGSC0003DMG400010620 Solanum tuberosum HOM05D006323 ORTHO05D007827 1.3e-154 550.4 464 58.4
RcHm_v2.0_Chr6g0309741 Rosa chinensis HOM05D006323 ORTHO05D007827 2.2e-154 549.7 466 61.2
TPR.G13155 Trifolium pratense HOM05D006323 ORTHO05D007827 4.9e-154 548.5 486 58.4
Sopen04g031380 Solanum pennellii HOM05D006323 ORTHO05D007827 6.4e-154 548.1 464 58.4
Manes.18G047100 Manihot esculenta HOM05D006323 ORTHO05D007827 3.5e-152 542.3 458 60.3
FvH4_2g32960 Fragaria vesca HOM05D006323 ORTHO05D007827 7.9e-152 541.2 460 60.2
FAN20G1244 Fragaria x ananassa HOM05D006323 ORTHO05D007827 7.9e-152 541.2 463 60.5
Oeu016579.1 Olea europaea HOM05D006323 ORTHO05D007827 1.0e-151 540.8 459 60.3
EL10Ac1g02373 Beta vulgaris HOM05D006323 ORTHO05D007827 2.3e-151 539.7 464 59.5
FAN24G0652 Fragaria x ananassa HOM05D006323 ORTHO05D007827 3.0e-151 539.3 460 60.0
Hund05295 Selenicereus undatus HOM05D006323 ORTHO05D007827 6.7e-151 538.1 456 59.6
Thecc.08G088000 Theobroma cacao HOM05D006323 ORTHO05D007827 1.9e-150 536.6 457 59.5
FAN27G3326 Fragaria x ananassa HOM05D006323 ORTHO05D007827 5.6e-150 535.0 463 59.6
Potri.002G117900 Populus trichocarpa HOM05D006323 ORTHO05D007827 7.4e-150 534.6 449 60.6
Migut.N02786 Erythranthe guttata HOM05D006323 ORTHO05D007827 3.7e-149 532.3 454 57.9
Duzib093G0619 Durio zibethinus HOM05D006323 ORTHO05D007827 4.8e-149 531.9 461 59.0
FAN15G2783 Fragaria x ananassa HOM05D006323 ORTHO05D007827 8.1e-149 531.2 463 59.2
CAN.G724.32 Capsicum annuum HOM05D006323 ORTHO05D007827 1.5e-147 526.9 470 56.8
Glyma.17G234600 Glycine max HOM05D006323 ORTHO05D007827 2.6e-147 526.2 480 58.1
Ciclev10001174m.g Citrus clementina HOM05D006323 ORTHO05D007827 3.4e-147 525.8 457 60.0
GSVIVG01009337001 Vitis vinifera HOM05D006323 ORTHO05D007827 5.8e-147 525.0 469 58.6
Gorai.009G220400 Gossypium raimondii HOM05D006323 ORTHO05D007827 1.1e-145 520.8 458 59.4
Phvul.001G028300 Phaseolus vulgaris HOM05D006323 ORTHO05D007827 1.9e-145 520.0 475 56.4
Sabra02G0092600 Salix brachista HOM05D006323 ORTHO05D007827 4.2e-145 518.8 449 59.5
Gohir.A05G210400 Gossypium hirsutum HOM05D006323 ORTHO05D007827 5.5e-145 518.5 457 58.4
Gohir.D05G213700 Gossypium hirsutum HOM05D006323 ORTHO05D007827 3.5e-144 515.8 457 58.2
HanXRQChr10g0298611 Helianthus annuus HOM05D006323 ORTHO05D007827 1.3e-143 513.8 475 57.3
SalBow2G0555 Salvia bowleyana HOM05D006323 ORTHO05D007827 1.3e-143 513.8 466 56.9
arahy.Tifrunner.gnm1.ann1.694GR7 Arachis hypogaea HOM05D006323 ORTHO05D007827 5.1e-143 511.9 425 61.4
Glyma.14G089027 Glycine max HOM05D006323 ORTHO05D007827 3.1e-140 502.7 462 57.8
SGA_v2.0_scaffold28G11834 Striga asiatica HOM05D006323 ORTHO05D007827 4.1e-140 502.3 467 56.3
Atru.chr13.839 Acer truncatum HOM05D006323 ORTHO05D007827 2.2e-138 496.5 452 57.7
Lsat_1_v5_gn_1_1301 Lactuca sativa HOM05D006323 ORTHO05D007827 4.3e-134 482.3 477 55.3
VMungo0647G1220 Vigna mungo HOM05D006323 ORTHO05D007827 4.8e-133 478.8 462 54.5
TAR625G0711 Trochodendron aralioides HOM05D006323 ORTHO05D007827 6.9e-132 474.9 442 56.6
THA.LOC104825780 Tarenaya hassleriana HOM05D006323 ORTHO05D007827 2.6e-131 473.0 449 53.5
AUR62022472 Chenopodium quinoa HOM05D006323 ORTHO05D007827 5.0e-130 468.8 480 52.9
CDE04G3275 Ceratophyllum demersum HOM05D006323 ORTHO05D007827 1.4e-127 460.7 453 51.4
Sc26g0004210 Simmondsia chinensis HOM05D006323 ORTHO05D007827 5.7e-126 455.3 413 57.1
QL05p065459 Quercus lobata HOM05D006323 ORTHO05D007827 2.4e-124 449.9 314 72.0
HPP92_013407 Vanilla planifolia HOM05D006323 ORTHO05D007827 4.1e-124 449.1 465 50.8
Carub.0003s1171 Capsella rubella HOM05D006323 ORTHO05D007827 2.6e-123 446.4 456 51.3
Sp6g10510 Schrenkiella parvula HOM05D006323 ORTHO05D007827 2.2e-122 443.4 452 51.5
Thhalv10028685m.g Eutrema salsugineum HOM05D006323 ORTHO05D007827 1.4e-121 440.7 454 52.4
Ah.05g167080 Amaranthus hybridus HOM05D006323 ORTHO05D007827 9.4e-121 438.0 460 50.7
Lj4A71T64 Lonicera japonica HOM05D006323 ORTHO05D007827 9.4e-121 438.0 321 68.8
ATR0739G201 Amborella trichopoda HOM05D006323 ORTHO05D007827 1.1e-118 431.0 496 49.0
AL3G24000 Arabidopsis lyrata HOM05D006323 ORTHO05D007827 3.1e-116 422.9 454 50.2
AT3G12350 Arabidopsis thaliana HOM05D006323 ORTHO05D007827 2.9e-114 416.4 455 48.4
C03p33680 Brassica napus HOM05D006323 ORTHO05D007827 8.5e-114 414.8 454 49.6
BolC3t15688H Brassica oleracea HOM05D006323 ORTHO05D007827 8.5e-114 414.8 454 49.6
Aa31LG5G21510 Aethionema arabicum HOM05D006323 ORTHO05D007827 1.9e-113 413.7 448 48.9
CARHR287100 Cardamine hirsuta HOM05D006323 ORTHO05D007827 9.4e-113 411.4 451 47.5
BcaC01g04786 Brassica carinata HOM05D006323 ORTHO05D007827 7.4e-110 401.7 453 48.3
A03p27900 Brassica napus HOM05D006323 ORTHO05D007827 2.4e-108 396.7 454 47.1
BcaB01g02882 Brassica carinata HOM05D006323 ORTHO05D007827 9.1e-108 394.8 457 46.6
CAN.G724.31 Capsicum annuum HOM05D006323 ORTHO05D007827 2.6e-107 393.3 457 46.0
BraA03t12002Z Brassica rapa HOM05D006323 ORTHO05D007827 1.3e-106 391.0 454 46.7
AUR62037416 Chenopodium quinoa HOM05D006323 ORTHO05D007827 2.9e-106 389.8 457 46.4
BcaC01g04794 Brassica carinata HOM05D006323 ORTHO05D007827 2.7e-99 366.7 453 45.7
HPP92_013383 Vanilla planifolia HOM05D006323 ORTHO05D007827 6.8e-95 352.1 370 50.5
ECA247G3150 Erigeron canadensis HOM05D006323 ORTHO05D007827 2.4e-84 317.0 323 55.4
Cc10_g05020 Coffea canephora HOM05D006323 ORTHO05D007827 2.3e-82 310.5 282 59.9
Mapoly0007s0129 Marchantia polymorpha HOM05D006323 ORTHO05D007827 1.5e-78 297.7 493 35.3
TAR628G0857 Trochodendron aralioides HOM05D006323 ORTHO05D007827 4.9e-77 292.7 290 55.2
COL.COLO4_28496 Corchorus olitorius HOM05D006323 ORTHO05D007827 4.3e-73 279.6 245 56.3
SEGI_30290 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 9.5e-65 251.9 331 45.0
Pp3c15_12240 Physcomitrium patens HOM05D006323 ORTHO05D007827 1.7e-58 231.1 522 33.1
unitig_8.g4874 Utricularia gibba HOM05D006323 ORTHO05D007827 5.8e-54 216.1 236 51.7
Os12g0511000 Oryza sativa ssp. japonica HOM05D006323 ORTHO05D007827 1.9e-52 211.1 389 35.7
Eucgr.L02719 Eucalyptus grandis HOM05D006323 ORTHO05D007827 2.3e-50 204.1 151 64.9
AagrBONN_evm.TU.Sc2ySwM_362.2944 Anthoceros agrestis HOM05D006323 ORTHO05D007827 3.1e-47 193.7 360 35.3
HPP92_013381 Vanilla planifolia HOM05D006323 ORTHO05D007827 7.1e-36 156.0 208 44.7
FvH4_3g44630 Fragaria vesca HOM05D006323 ORTHO05D007827 2.4e-31 141.0 90 66.7
TAR623G1714 Trochodendron aralioides HOM05D006323 ORTHO05D007827 3.1e-31 140.6 99 62.6
CBR_g25752 Chara braunii HOM05D006323 ORTHO05D007827 5.3e-31 139.8 551 23.8
COL.COLO4_28497 Corchorus olitorius HOM05D006323 ORTHO05D007827 4.5e-30 136.7 136 47.1
MD08G1081200 Malus domestica HOM05D006323 ORTHO05D007827 3.8e-29 133.7 123 56.9
Eucgr.C01112 Eucalyptus grandis HOM05D006323 ORTHO05D007827 8.7e-26 122.5 92 63.0
Lj5P501T7 Lonicera japonica HOM05D006323 ORTHO05D007827 6.9e-23 112.8 90 68.9
QL04p027551 Quercus lobata HOM05D006323 ORTHO05D007827 9.0e-23 112.5 88 63.6
SEGI_04434 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 2.0e-22 111.3 167 39.5
Lj1P1160T24 Lonicera japonica HOM05D006323 ORTHO05D007827 1.7e-21 108.2 77 72.7
unitig_8.g4875 Utricularia gibba HOM05D006323 ORTHO05D007827 2.9e-21 107.5 105 47.6
TAR623G1335 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.2e-19 102.1 65 66.2
Zm00001eb264620 Zea mays HOM05D006323 ORTHO05D007827 4.3e-17 93.6 245 31.0
Oeu037483.1 Olea europaea HOM05D006323 ORTHO05D007827 3.1e-07 60.8 135 38.5


User provided reference genes

Program Settings