Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_22401 Corylus avellana HOM05D006874 ORTHO05D008334 9.9e-209 729.9 388 100.0
Haze_22393 Corylus avellana HOM05D006874 ORTHO05D008334 1.7e-208 729.2 388 99.7
Cfa013741 Carpinus fangiana HOM05D006874 ORTHO05D008334 1.2e-150 537.0 381 77.4
QL12p038579 Quercus lobata HOM05D006874 ORTHO05D008334 1.9e-90 337.0 397 54.4
CiPaw.07G172200 Carya illinoinensis HOM05D006874 ORTHO05D008334 1.7e-67 260.8 370 44.9
TAR628G0654 Trochodendron aralioides HOM05D006874 ORTHO05D008334 8.8e-64 248.4 391 43.7
Manes.05G183400 Manihot esculenta HOM05D006874 ORTHO05D008334 2.6e-60 236.9 380 43.7
Manes.18G049200 Manihot esculenta HOM05D006874 ORTHO05D008334 5.0e-59 232.6 386 42.2
RcHm_v2.0_Chr6g0309981 Rosa chinensis HOM05D006874 ORTHO05D008334 1.2e-52 211.5 381 39.9
Dinv39206 Davidia involucrata HOM05D006874 ORTHO05D008334 3.5e-52 209.9 375 42.1
Duzib093G1642 Durio zibethinus HOM05D006874 ORTHO05D008334 6.5e-51 205.7 376 41.2
Ciclev10016010m.g Citrus clementina HOM05D006874 ORTHO05D008334 2.1e-49 200.7 342 41.5
Duzib116G0206 Durio zibethinus HOM05D006874 ORTHO05D008334 4.7e-49 199.5 390 37.9
Eucgr.F02227 Eucalyptus grandis HOM05D006874 ORTHO05D008334 8.8e-48 195.3 373 35.9
Actinidia19297 Actinidia chinensis HOM05D006874 ORTHO05D008334 3.3e-47 193.4 378 38.6
TWI56G0226 Tripterygium wilfordii HOM05D006874 ORTHO05D008334 1.3e-46 191.4 370 37.0
Nn5g30659 Nelumbo nucifera HOM05D006874 ORTHO05D008334 2.2e-46 190.7 393 38.7
Nn6g34522 Nelumbo nucifera HOM05D006874 ORTHO05D008334 4.8e-46 189.5 408 36.0
FAN27G0759 Fragaria x ananassa HOM05D006874 ORTHO05D008334 1.8e-45 187.6 372 39.2
FAN15G0895 Fragaria x ananassa HOM05D006874 ORTHO05D008334 4.1e-45 186.4 373 39.1
FvH4_2g32690 Fragaria vesca HOM05D006874 ORTHO05D008334 2.2e-43 180.6 371 38.5
Prupe.1G419500 Prunus persica HOM05D006874 ORTHO05D008334 9.4e-42 175.3 361 37.4
Thecc.08G084900 Theobroma cacao HOM05D006874 ORTHO05D008334 1.2e-41 174.9 369 36.3
Actinidia10219 Actinidia chinensis HOM05D006874 ORTHO05D008334 2.1e-41 174.1 360 36.1
CANSAT25G0531 Cannabis sativa HOM05D006874 ORTHO05D008334 1.8e-40 171.0 369 36.0
Lalb_Chr23g0267621 Lupinus albus HOM05D006874 ORTHO05D008334 8.8e-40 168.7 380 35.0
MBI16_g45151_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 8.8e-40 168.7 375 34.7
MD08G1078600 Malus domestica HOM05D006874 ORTHO05D008334 8.8e-40 168.7 389 37.0
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 1.2e-39 168.3 357 37.8
Glyma.17G233100 Glycine max HOM05D006874 ORTHO05D008334 7.5e-39 165.6 366 34.4
Sabra14G0008000 Salix brachista HOM05D006874 ORTHO05D008334 1.3e-38 164.9 419 35.3
Potri.014G013200 Populus trichocarpa HOM05D006874 ORTHO05D008334 2.2e-38 164.1 379 36.7
Dinv09539 Davidia involucrata HOM05D006874 ORTHO05D008334 1.1e-37 161.8 352 35.2
PGR031G0049 Punica granatum HOM05D006874 ORTHO05D008334 1.8e-37 161.0 372 32.5
Glyma.14G089075 Glycine max HOM05D006874 ORTHO05D008334 4.1e-37 159.8 359 35.7
Oeu053642.1 Olea europaea HOM05D006874 ORTHO05D008334 4.1e-37 159.8 343 33.8
Potri.002G115600 Populus trichocarpa HOM05D006874 ORTHO05D008334 9.1e-37 158.7 427 34.7
Rhsim06G0064400 Rhododendron simsii HOM05D006874 ORTHO05D008334 5.9e-36 156.0 363 34.2
Gohir.D05G215200 Gossypium hirsutum HOM05D006874 ORTHO05D008334 3.8e-35 153.3 345 35.4
Aqoxy6G02484 Aquilegia oxysepala HOM05D006874 ORTHO05D008334 6.5e-35 152.5 403 35.2
Psat0s1031g0080 Pisum sativum HOM05D006874 ORTHO05D008334 1.5e-34 151.4 368 34.5
Phvul.001G029700 Phaseolus vulgaris HOM05D006874 ORTHO05D008334 3.2e-34 150.2 368 32.9
vmacro21419 Vaccinium macrocarpon HOM05D006874 ORTHO05D008334 3.2e-34 150.2 376 33.5
Medtr3g103400 Medicago truncatula HOM05D006874 ORTHO05D008334 4.2e-34 149.8 380 31.8
Cc10_g07600 Coffea canephora HOM05D006874 ORTHO05D008334 5.5e-34 149.4 364 32.1
Gohir.A05G211900 Gossypium hirsutum HOM05D006874 ORTHO05D008334 5.5e-34 149.4 345 34.5
Gorai.009G221900 Gossypium raimondii HOM05D006874 ORTHO05D008334 1.6e-33 147.9 362 34.3
Gohir.A06G025400 Gossypium hirsutum HOM05D006874 ORTHO05D008334 4.7e-33 146.4 348 32.8
Atru.chr13.867 Acer truncatum HOM05D006874 ORTHO05D008334 6.1e-33 146.0 309 38.2
Gorai.010G027100 Gossypium raimondii HOM05D006874 ORTHO05D008334 8.0e-33 145.6 348 32.8
PSO541G5864 Papaver somniferum HOM05D006874 ORTHO05D008334 1.4e-32 144.8 387 34.1
Gohir.D06G022500 Gossypium hirsutum HOM05D006874 ORTHO05D008334 1.8e-32 144.4 348 32.5
Nitab4.5_0002796g0010 Nicotiana tabacum HOM05D006874 ORTHO05D008334 3.0e-32 143.7 355 32.4
Sabra02G0091300 Salix brachista HOM05D006874 ORTHO05D008334 1.2e-31 141.7 352 33.2
Psat5g037000 Pisum sativum HOM05D006874 ORTHO05D008334 5.7e-31 139.4 365 34.2
Hund05278 Selenicereus undatus HOM05D006874 ORTHO05D008334 7.5e-31 139.0 389 31.1
Cpa.g.sc524.2 Carica papaya HOM05D006874 ORTHO05D008334 1.3e-30 138.3 371 31.0
Medtr1g017530 Medicago truncatula HOM05D006874 ORTHO05D008334 1.7e-30 137.9 358 30.4
TPR.G13116 Trifolium pratense HOM05D006874 ORTHO05D008334 2.2e-30 137.5 374 32.1
Nitab4.5_0001426g0040 Nicotiana tabacum HOM05D006874 ORTHO05D008334 1.4e-29 134.8 349 31.5
MELO3C016836.2 Cucumis melo HOM05D006874 ORTHO05D008334 3.1e-29 133.7 377 34.5
Ca_15889_v3 Cicer arietinum L. HOM05D006874 ORTHO05D008334 7.0e-29 132.5 358 30.4
MSTRG.24387 Avicennia marina HOM05D006874 ORTHO05D008334 9.1e-29 132.1 355 32.4
PSO675G5853 Papaver somniferum HOM05D006874 ORTHO05D008334 1.6e-28 131.3 400 32.8
Glyma.06G048600 Glycine max HOM05D006874 ORTHO05D008334 4.5e-28 129.8 395 31.1
AUR62037457 Chenopodium quinoa HOM05D006874 ORTHO05D008334 2.3e-27 127.5 369 29.8
CsaV3_4G035240 Cucumis sativus L. HOM05D006874 ORTHO05D008334 2.9e-27 127.1 356 33.1
VMungo0647G0698 Vigna mungo HOM05D006874 ORTHO05D008334 5.0e-27 126.3 376 31.1
MD15G1065400 Malus domestica HOM05D006874 ORTHO05D008334 1.5e-26 124.8 190 42.6
Migut.C00474 Erythranthe guttata HOM05D006874 ORTHO05D008334 1.9e-26 124.4 351 32.8
EL10Ac1g02352 Beta vulgaris HOM05D006874 ORTHO05D008334 2.5e-26 124.0 375 29.9
Sc15g0005390 Simmondsia chinensis HOM05D006874 ORTHO05D008334 2.5e-26 124.0 359 32.3
FAN24G0724 Fragaria x ananassa HOM05D006874 ORTHO05D008334 4.2e-26 123.2 162 49.4
MBI16_g41242_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 2.1e-25 120.9 118 55.1
TAR625G1551 Trochodendron aralioides HOM05D006874 ORTHO05D008334 2.8e-25 120.6 145 46.2
AUR62035010 Chenopodium quinoa HOM05D006874 ORTHO05D008334 3.6e-25 120.2 380 28.7
SalBow7G3254 Salvia bowleyana HOM05D006874 ORTHO05D008334 4.7e-25 119.8 329 31.0
Psat6g017400 Pisum sativum HOM05D006874 ORTHO05D008334 8.0e-25 119.0 350 30.3
Solyc04g077535.1 Solanum lycopersicum HOM05D006874 ORTHO05D008334 1.8e-24 117.9 411 29.7
CiPaw.06G164000 Carya illinoinensis HOM05D006874 ORTHO05D008334 2.3e-24 117.5 368 29.1
ClCG05G026570 Citrullus lanatus HOM05D006874 ORTHO05D008334 3.0e-24 117.1 345 31.9
CSS0036555 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 5.2e-24 116.3 190 42.6
Lj1g0014879 Lotus japonicus HOM05D006874 ORTHO05D008334 2.6e-23 114.0 368 30.7
CSS0007120 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 4.4e-23 113.2 354 30.5
Potri.001G290000 Populus trichocarpa HOM05D006874 ORTHO05D008334 7.5e-23 112.5 366 30.3
VMungo1309G0435 Vigna mungo HOM05D006874 ORTHO05D008334 7.5e-23 112.5 363 31.7
Cfa004701 Carpinus fangiana HOM05D006874 ORTHO05D008334 9.8e-23 112.1 362 29.3
Sed0017147 Sechium edule HOM05D006874 ORTHO05D008334 9.8e-23 112.1 398 30.9
Phvul.009G073900 Phaseolus vulgaris HOM05D006874 ORTHO05D008334 1.7e-22 111.3 388 30.9
PGSC0003DMG400004918 Solanum tuberosum HOM05D006874 ORTHO05D008334 1.7e-22 111.3 354 28.8
CSS0047478 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 2.9e-22 110.5 354 30.5
ATR0739G189 Amborella trichopoda HOM05D006874 ORTHO05D008334 3.7e-22 110.2 390 29.2
Hma1.2p1_1170F.1_g263450 Hydrangea macrophylla HOM05D006874 ORTHO05D008334 4.9e-22 109.8 112 51.8
Actinidia00356 Actinidia chinensis HOM05D006874 ORTHO05D008334 8.3e-22 109.0 217 35.9
Potri.009G085500 Populus trichocarpa HOM05D006874 ORTHO05D008334 1.4e-21 108.2 356 30.9
Sabra16G0181500 Salix brachista HOM05D006874 ORTHO05D008334 1.4e-21 108.2 365 30.7
DCAR_020062 Daucus carota HOM05D006874 ORTHO05D008334 3.2e-21 107.1 335 29.0
SGA_v2.0_scaffold14G07085 Striga asiatica HOM05D000285 ORTHO05D000241 7.0e-21 105.9 116 47.4
Manes.07G056800 Manihot esculenta HOM05D006874 ORTHO05D008334 3.5e-20 103.6 344 27.6
MSTRG.25026 Avicennia marina HOM05D006874 ORTHO05D008334 5.9e-20 102.8 238 34.0
QL11p029345 Quercus lobata HOM05D006874 ORTHO05D008334 1.5e-18 98.2 363 26.2
Haze_10303 Corylus avellana HOM05D006874 ORTHO05D008334 2.5e-18 97.4 345 27.2
Lj5g0027457 Lotus japonicus HOM05D006874 ORTHO05D008334 4.3e-18 96.7 357 29.7
CDE02G2198 Ceratophyllum demersum HOM05D006874 ORTHO05D008334 2.3e-16 90.9 353 28.0
Ciclev10030239m.g Citrus clementina HOM05D006874 ORTHO05D008334 2.6e-15 87.4 106 40.6
Sopen04g031160 Solanum pennellii HOM05D006874 ORTHO05D008334 7.5e-15 85.9 259 29.3
COL.COLO4_28465 Corchorus olitorius HOM05D006874 ORTHO05D008334 1.1e-13 82.0 197 34.0
Dinv16069 Davidia involucrata HOM05D006874 ORTHO05D008334 9.2e-13 79.0 338 25.7
Gorai.002G136000 Gossypium raimondii HOM05D006874 ORTHO05D008334 2.7e-12 77.4 347 28.2
Gohir.A01G123500 Gossypium hirsutum HOM05D006874 ORTHO05D008334 4.6e-12 76.6 347 28.0
RhsimUnG0041100 Rhododendron simsii HOM05D063883 ORTHO05D008334 1.3e-11 75.1 369 26.8
RhsimUnG0123100 Rhododendron simsii HOM05D063883 ORTHO05D008334 1.3e-11 75.1 369 26.8
TAR376G0413 Trochodendron aralioides HOM05D006874 ORTHO05D008334 3.9e-11 73.6 168 35.7
Cpa.g.sc91.58 Carica papaya HOM05D016697 ORTHO05D018163 1.1e-08 65.5 380 23.9
HPP92_019577 Vanilla planifolia HOM05D025517 ORTHO05D019338 1.4e-08 65.1 337 24.6
TAR625G0319 Trochodendron aralioides HOM05D006874 ORTHO05D008334 1.8e-08 64.7 91 44.0
TPR.G30198 Trifolium pratense HOM05D006874 ORTHO05D008334 6.8e-08 62.8 70 47.1
arahy.Tifrunner.gnm1.ann1.WJQ75P Arachis hypogaea HOM05D006874 ORTHO05D008334 1.2e-07 62.0 161 33.5
COL.COLO4_32486 Corchorus olitorius HOM05D016697 ORTHO05D018163 1.7e-06 58.2 369 22.5
arahy.Tifrunner.gnm1.ann1.E4Y0Z3 Arachis hypogaea HOM05D032995 ORTHO05D031506 2.2e-06 57.8 111 40.5
arahy.Tifrunner.gnm1.ann1.I6QTPS Arachis hypogaea HOM05D032995 ORTHO05D031506 4.9e-06 56.6 111 40.5
arahy.Tifrunner.gnm1.ann1.34G3CR Arachis hypogaea HOM05D032995 ORTHO05D031506 8.3e-06 55.8 111 39.6


User provided reference genes

Program Settings