Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_22302 Corylus avellana HOM05D006600 ORTHO05D008446 3.8e-164 581.6 336 100.0
Cfa013668 Carpinus fangiana HOM05D006600 ORTHO05D008446 1.7e-148 529.6 328 92.1
QL12p037547 Quercus lobata HOM05D006600 ORTHO05D008446 1.1e-142 510.4 327 75.8
Atru.chr13.803 Acer truncatum HOM05D006600 ORTHO05D008446 2.7e-138 495.7 326 86.5
Dinv44978 Davidia involucrata HOM05D006600 ORTHO05D008446 6.7e-137 491.1 328 85.1
CiPaw.08G048500 Carya illinoinensis HOM05D006600 ORTHO05D008446 4.4e-136 488.4 330 73.9
TAR625G0631 Trochodendron aralioides HOM05D006600 ORTHO05D008446 7.4e-136 487.6 328 84.8
arahy.Tifrunner.gnm1.ann1.UTGV4K Arachis hypogaea HOM05D006600 ORTHO05D008446 6.3e-135 484.6 328 84.1
arahy.Tifrunner.gnm1.ann1.H62KW4 Arachis hypogaea HOM05D006600 ORTHO05D008446 1.8e-134 483.0 328 84.1
Gorai.009G217900 Gossypium raimondii HOM05D006600 ORTHO05D008446 4.1e-134 481.9 326 84.7
Prupe.1G425800 Prunus persica HOM05D006600 ORTHO05D008446 4.1e-134 481.9 328 84.1
Rhsim07G0222000 Rhododendron simsii HOM05D006600 ORTHO05D008446 9.1e-134 480.7 328 82.0
Gohir.A05G207900 Gossypium hirsutum HOM05D006600 ORTHO05D008446 1.2e-133 480.3 326 84.7
CSS0036700 Camellia sinensis var. sinensis HOM05D006600 ORTHO05D008446 2.0e-133 479.6 328 83.8
Thecc.08G092000 Theobroma cacao HOM05D006600 ORTHO05D008446 2.0e-133 479.6 326 74.2
Ciclev10001599m.g Citrus clementina HOM05D006600 ORTHO05D008446 1.3e-132 476.9 344 80.8
Gohir.D05G211400 Gossypium hirsutum HOM05D006600 ORTHO05D008446 1.3e-132 476.9 326 84.4
TWI56G0382 Tripterygium wilfordii HOM05D006600 ORTHO05D008446 3.8e-132 475.3 327 84.4
MD08G1088100 Malus domestica HOM05D006600 ORTHO05D008446 1.1e-131 473.8 328 82.6
Lj1g0008642 Lotus japonicus HOM05D006600 ORTHO05D008446 2.7e-130 469.2 326 81.9
Phvul.009G070400 Phaseolus vulgaris HOM05D006600 ORTHO05D008446 3.6e-130 468.8 324 82.7
Ca_15912_v3 Cicer arietinum L. HOM05D006600 ORTHO05D008446 8.0e-130 467.6 324 81.8
Manes.18G044200 Manihot esculenta HOM05D006600 ORTHO05D008446 1.0e-129 467.2 328 70.7
Actinidia38095 Actinidia chinensis HOM05D006600 ORTHO05D008446 1.4e-129 466.8 327 82.6
Medtr3g102800 Medicago truncatula HOM05D006600 ORTHO05D008446 3.0e-129 465.7 324 69.8
VMungo1309G2568 Vigna mungo HOM05D006600 ORTHO05D008446 5.2e-129 464.9 324 81.5
Glyma.06G045000 Glycine max HOM05D006600 ORTHO05D008446 6.7e-129 464.5 324 81.8
Psat5g038240 Pisum sativum HOM05D006600 ORTHO05D008446 8.8e-129 464.2 324 69.8
vmacro04585 Vaccinium macrocarpon HOM05D006600 ORTHO05D008446 2.6e-128 462.6 328 81.7
Lalb_Chr23g0267431 Lupinus albus HOM05D006600 ORTHO05D008446 3.3e-128 462.2 328 80.5
TPR.G33718 Trifolium pratense HOM05D006600 ORTHO05D008446 4.4e-128 461.8 322 68.9
ClCG08G016350 Citrullus lanatus HOM05D006600 ORTHO05D008446 7.4e-128 461.1 328 80.5
CsaV3_2G026260 Cucumis sativus L. HOM05D006600 ORTHO05D008446 1.3e-127 460.3 328 79.9
Hma1.2p1_0923F.1_g236990 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 1.3e-127 460.3 328 82.3
Sabra14G0012400 Salix brachista HOM05D006600 ORTHO05D008446 3.7e-127 458.8 326 67.5
Glyma.04G044500 Glycine max HOM05D006600 ORTHO05D008446 4.8e-127 458.4 324 68.8
PSO541G2868 Papaver somniferum HOM05D006600 ORTHO05D008446 8.2e-127 457.6 328 74.7
Sed0004073 Sechium edule HOM05D006600 ORTHO05D008446 8.2e-127 457.6 328 81.1
MELO3C010818.2 Cucumis melo HOM05D006600 ORTHO05D008446 1.4e-126 456.8 342 77.2
PGR083G0558 Punica granatum HOM05D006600 ORTHO05D008446 1.4e-126 456.8 328 79.9
Solyc04g078120.3 Solanum lycopersicum HOM05D006600 ORTHO05D008446 1.4e-126 456.8 328 69.2
MSTRG.1040 Avicennia marina HOM05D006600 ORTHO05D008446 2.4e-126 456.1 324 78.1
Nitab4.5_0000934g0020 Nicotiana tabacum HOM05D006600 ORTHO05D008446 2.4e-126 456.1 320 67.8
Eucgr.F00122 Eucalyptus grandis HOM05D006600 ORTHO05D008446 3.1e-126 455.7 328 81.4
PGSC0003DMG400021533 Solanum tuberosum HOM05D006600 ORTHO05D008446 3.1e-126 455.7 328 77.1
Sopen04g031730 Solanum pennellii HOM05D006600 ORTHO05D008446 4.1e-126 455.3 328 68.6
THA.LOC104807092 Tarenaya hassleriana HOM05D006600 ORTHO05D008446 4.1e-126 455.3 325 67.4
MBI16_g13383_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D008446 5.3e-126 454.9 325 68.9
CANSAT35G1599 Cannabis sativa HOM05D006600 ORTHO05D008446 7.0e-126 454.5 328 81.1
PSO675G8764 Papaver somniferum HOM05D006600 ORTHO05D008446 7.0e-126 454.5 328 66.8
Lsat_1_v5_gn_6_112481 Lactuca sativa HOM05D006600 ORTHO05D008446 9.1e-126 454.1 327 79.8
Aqoxy6G02751 Aquilegia oxysepala HOM05D006600 ORTHO05D008446 1.2e-125 453.8 324 81.5
Nitab4.5_0003228g0070 Nicotiana tabacum HOM05D006600 ORTHO05D008446 1.6e-125 453.4 320 68.1
GSVIVG01009372001 Vitis vinifera HOM05D006600 ORTHO05D008446 2.2e-124 449.5 228 90.8
HanXRQChr10g0304021 Helianthus annuus HOM05D006600 ORTHO05D008446 2.9e-124 449.1 328 67.1
Oeu050861.1 Olea europaea HOM05D006600 ORTHO05D008446 3.8e-124 448.7 327 69.7
Peaxi162Scf00081g00125 Petunia axillaris HOM05D006600 ORTHO05D008446 3.2e-123 445.7 328 77.4
SalBow7G4697 Salvia bowleyana HOM05D006600 ORTHO05D008446 3.2e-123 445.7 327 78.0
Cc10_g05550 Coffea canephora HOM05D006600 ORTHO05D008446 2.7e-122 442.6 328 78.4
AUR62037454 Chenopodium quinoa HOM05D006600 ORTHO05D008446 3.6e-122 442.2 323 66.6
DCAR_020080 Daucus carota HOM05D006600 ORTHO05D008446 1.8e-121 439.9 328 77.1
Lj4A761T87 Lonicera japonica HOM05D006600 ORTHO05D008446 1.8e-121 439.9 228 87.3
Migut.C00501 Erythranthe guttata HOM05D006600 ORTHO05D008446 2.3e-121 439.5 324 78.4
RcHm_v2.0_Chr6g0309231 Rosa chinensis HOM05D006600 ORTHO05D008446 4.0e-121 438.7 325 77.5
Ah.15g092540 Amaranthus hybridus HOM05D006600 ORTHO05D008446 5.2e-121 438.3 326 63.8
SGA_v2.0_scaffold244G44349 Striga asiatica HOM05D006600 ORTHO05D008446 5.2e-121 438.3 324 66.0
AUR62038783 Chenopodium quinoa HOM05D006600 ORTHO05D008446 7.5e-120 434.5 325 64.6
FAN15G1504 Fragaria x ananassa HOM05D006600 ORTHO05D008446 9.7e-120 434.1 325 76.6
FvH4_2g33350 Fragaria vesca HOM05D006600 ORTHO05D008446 2.8e-119 432.6 325 76.0
FAN24G1058 Fragaria x ananassa HOM05D006600 ORTHO05D008446 4.8e-119 431.8 325 76.0
CAN.G1054.24 Capsicum annuum HOM05D006600 ORTHO05D008446 8.3e-119 431.0 228 86.0
CDE04G0491 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 8.3e-119 431.0 326 64.7
FAN20G2273 Fragaria x ananassa HOM05D006600 ORTHO05D008446 1.1e-118 430.6 325 69.2
unitig_62.g23648 Utricularia gibba HOM05D006600 ORTHO05D008446 9.1e-118 427.6 323 63.5
Cpa.g.sc21.115 Carica papaya HOM05D006600 ORTHO05D008446 2.0e-117 426.4 228 86.0
AT5G65860 Arabidopsis thaliana HOM05D006600 ORTHO05D008446 9.4e-115 417.5 323 68.1
EL10As7g23812 Beta vulgaris HOM05D006600 ORTHO05D008446 9.4e-115 417.5 369 57.2
Carub.0008s2674 Capsella rubella HOM05D006600 ORTHO05D008446 1.6e-114 416.8 322 73.3
FAN27G3009 Fragaria x ananassa HOM05D006600 ORTHO05D008446 3.6e-114 415.6 325 73.8
ATR0030G048 Amborella trichopoda HOM05D006600 ORTHO05D008446 1.2e-112 410.6 333 73.9
Sp2g28940 Schrenkiella parvula HOM05D006600 ORTHO05D008446 1.5e-112 410.2 323 73.7
BolC3t18247H Brassica oleracea HOM05D006600 ORTHO05D008446 3.4e-112 409.1 341 58.4
CARHR279850 Cardamine hirsuta HOM05D006600 ORTHO05D008446 9.8e-112 407.5 329 71.7
Thhalv10005718m.g Eutrema salsugineum HOM05D006600 ORTHO05D008446 1.3e-111 407.1 323 64.1
A06p32700 Brassica napus HOM05D006600 ORTHO05D008446 1.8e-110 403.3 323 59.8
C03p59830 Brassica napus HOM05D006600 ORTHO05D008446 2.4e-110 402.9 323 60.1
Zm00001eb214310 Zea mays HOM05D006600 ORTHO05D008446 2.4e-110 402.9 321 60.4
BraA06t26199Z Brassica rapa HOM05D006600 ORTHO05D008446 3.1e-110 402.5 323 59.4
BcaB02g09901 Brassica carinata HOM05D006600 ORTHO05D008446 7.7e-109 397.9 323 58.8
Os03g0761200 Oryza sativa ssp. japonica HOM05D006600 ORTHO05D008446 3.8e-108 395.6 328 59.1
COL.COLO4_28538 Corchorus olitorius HOM05D006600 ORTHO05D008446 5.0e-108 395.2 335 61.2
SEGI_28402 Sequoiadendron giganteum HOM05D006600 ORTHO05D008446 2.3e-105 386.3 317 72.9
HPP92_018760 Vanilla planifolia HOM05D006600 ORTHO05D008446 1.3e-103 380.6 319 58.3
Nn1g04625 Nelumbo nucifera HOM05D006600 ORTHO05D008446 2.2e-103 379.8 328 71.0
BcaC01g02830 Brassica carinata HOM05D006600 ORTHO05D008446 2.4e-102 376.3 223 74.9
Aa31LG1G16240 Aethionema arabicum HOM05D006600 ORTHO05D008446 1.6e-98 363.6 311 70.4
Duzib093G2027 Durio zibethinus HOM05D006600 ORTHO05D008446 7.0e-94 348.2 260 66.9
SMO228G0045 Selaginella moellendorffii HOM05D006600 ORTHO05D008446 2.7e-93 346.3 226 67.7
AagrBONN_evm.TU.Sc2ySwM_228.1907 Anthoceros agrestis HOM05D006600 ORTHO05D008446 7.3e-91 338.2 212 70.8
Potri.014G019000 Populus trichocarpa HOM05D006600 ORTHO05D008446 2.1e-90 336.7 263 79.5
Hma1.2p1_0923F.1_g236980 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 4.7e-90 335.5 281 77.2
Mapoly0063s0069 Marchantia polymorpha HOM05D006600 ORTHO05D008446 1.8e-89 333.6 225 66.2
COL.COLO4_28541 Corchorus olitorius HOM05D006600 ORTHO05D008446 1.3e-84 317.4 246 65.4
ECA246G2737 Erigeron canadensis HOM05D006600 ORTHO05D008446 3.9e-84 315.8 268 72.4
Sc26g0004110 Simmondsia chinensis HOM05D006600 ORTHO05D008446 4.7e-74 282.3 249 75.1
AL8G43570 Arabidopsis lyrata HOM05D006600 ORTHO05D008446 1.0e-68 264.6 247 69.6
Cre01.g050050 Chlamydomonas reinhardtii HOM05D006600 ORTHO05D008446 1.4e-65 254.2 378 37.3
MD15G1072900 Malus domestica HOM05D006600 ORTHO05D008446 1.7e-63 247.3 191 64.9
Pp3c17_19880 Physcomitrium patens HOM05D006600 ORTHO05D008446 8.7e-60 235.0 251 62.9
TAR624G0301 Trochodendron aralioides HOM05D006600 ORTHO05D008446 8.7e-60 235.0 131 84.0
MCO09G534 Micromonas commoda HOM05D006600 ORTHO05D008446 1.9e-59 233.8 329 43.8
CBR_g40512 Chara braunii HOM05D000409 ORTHO05D000184 2.1e-58 230.3 189 57.1
BcaC01g02829 Brassica carinata HOM05D006600 ORTHO05D008446 5.8e-56 222.2 228 49.6
TAR374G0485 Trochodendron aralioides HOM05D000474 ORTHO05D003648 1.7e-55 220.7 126 81.7
CDE07G1425 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 6.7e-52 208.8 124 75.0
Actinidia08258 Actinidia chinensis HOM05D006600 ORTHO05D008446 1.1e-43 181.4 94 87.2
Oeu040380.1 Olea europaea HOM05D006600 ORTHO05D008446 3.3e-19 100.1 87 64.4
MBI16_g35586_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D001493 3.1e-17 93.6 83 53.0
Actinidia08259 Actinidia chinensis HOM05D006600 ORTHO05D008446 5.3e-09 66.2 42 69.0
Dinv39240 Davidia involucrata HOM05D006600 ORTHO05D008446 2.0e-08 64.3 97 41.2
GSVIVG01038121001 Vitis vinifera HOM05D006600 ORTHO05D008446 2.6e-08 63.9 43 69.8


User provided reference genes

Program Settings