Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_22241 Corylus avellana HOM05D006889 ORTHO05D008614 3.4e-171 605.1 353 100.0
QL09p026702 Quercus lobata HOM05D006889 ORTHO05D008614 4.1e-137 491.9 361 81.4
CiPaw.07G182100 Carya illinoinensis HOM05D006889 ORTHO05D008614 8.6e-127 457.6 336 84.5
Ciclev10012044m.g Citrus clementina HOM05D006889 ORTHO05D008614 5.8e-123 444.9 356 74.4
Atru.chr12.2063 Acer truncatum HOM05D006889 ORTHO05D008614 1.3e-122 443.7 362 75.4
Thecc.06G017600 Theobroma cacao HOM05D006889 ORTHO05D008614 6.0e-120 434.9 362 73.2
GSVIVG01024467001 Vitis vinifera HOM05D006889 ORTHO05D008614 1.3e-117 427.2 362 74.6
RcHm_v2.0_Chr1g0383401 Rosa chinensis HOM05D006889 ORTHO05D008614 9.0e-116 421.0 360 70.0
Manes.09G119000 Manihot esculenta HOM05D006889 ORTHO05D008614 2.0e-115 419.9 359 70.8
Prupe.2G323000 Prunus persica HOM05D006889 ORTHO05D008614 3.4e-115 419.1 356 69.7
TAR369G0178 Trochodendron aralioides HOM05D006889 ORTHO05D008614 4.5e-115 418.7 353 72.0
Gorai.010G175600 Gossypium raimondii HOM05D006889 ORTHO05D008614 5.8e-115 418.3 362 71.5
Gohir.A06G144633 Gossypium hirsutum HOM05D006889 ORTHO05D008614 9.9e-115 417.5 362 71.3
FAN03G0535 Fragaria x ananassa HOM05D006889 ORTHO05D008614 7.1e-113 411.4 360 67.5
Eucgr.K00107 Eucalyptus grandis HOM05D006889 ORTHO05D008614 1.6e-112 410.2 358 68.4
Nn6g34807 Nelumbo nucifera HOM05D006889 ORTHO05D008614 5.1e-111 405.2 375 70.1
FAN10G1689 Fragaria x ananassa HOM05D006889 ORTHO05D008614 1.5e-110 403.7 360 67.5
FAN10G2743 Fragaria x ananassa HOM05D006889 ORTHO05D008614 5.6e-110 401.7 360 67.2
FvH4_7g33430 Fragaria vesca HOM05D006889 ORTHO05D008614 3.6e-109 399.1 360 67.5
Potri.001G412800 Populus trichocarpa HOM05D006889 ORTHO05D008614 3.6e-109 399.1 345 71.6
Sopen04g004970 Solanum pennellii HOM05D006889 ORTHO05D008614 2.0e-107 393.3 364 69.8
Solyc04g009830.3 Solanum lycopersicum HOM05D006889 ORTHO05D008614 4.5e-107 392.1 363 67.8
Migut.F00816 Erythranthe guttata HOM05D006889 ORTHO05D008614 9.9e-107 391.0 364 65.4
Cpa.g.sc140.53 Carica papaya HOM05D006889 ORTHO05D008614 1.7e-106 390.2 359 69.9
Dinv25463 Davidia involucrata HOM05D006889 ORTHO05D008614 4.9e-106 388.7 368 63.6
PSO384G0326 Papaver somniferum HOM05D006889 ORTHO05D008614 6.4e-106 388.3 377 62.9
CSS0010313 Camellia sinensis var. sinensis HOM05D006889 ORTHO05D008614 8.4e-106 387.9 335 66.3
Lalb_Chr13g0293181 Lupinus albus HOM05D006889 ORTHO05D008614 1.1e-105 387.5 360 66.7
THA.LOC104805469 Tarenaya hassleriana HOM05D006889 ORTHO05D008614 7.9e-104 381.3 358 67.9
PGSC0003DMG400025437 Solanum tuberosum HOM05D006889 ORTHO05D008614 2.3e-103 379.8 383 65.8
Aqoxy4G02722 Aquilegia oxysepala HOM05D006889 ORTHO05D008614 3.9e-103 379.0 357 66.4
FAN01G0055 Fragaria x ananassa HOM05D006889 ORTHO05D008614 4.3e-102 375.6 339 65.2
SalBow3G4178 Salvia bowleyana HOM05D006889 ORTHO05D008614 5.6e-102 375.2 377 66.8
Sabra16G0274900 Salix brachista HOM05D006889 ORTHO05D008614 9.6e-102 374.4 376 63.3
TWI60G1635 Tripterygium wilfordii HOM05D006889 ORTHO05D008614 1.3e-101 374.0 359 63.2
MBI14_g11688_MAGBIO Magnolia biondii HOM05D006889 ORTHO05D008614 1.6e-101 373.6 366 69.9
Carub.0004s1859 Capsella rubella HOM05D006889 ORTHO05D008614 3.7e-101 372.5 365 61.1
CsaV3_5G005080 Cucumis sativus L. HOM05D006889 ORTHO05D008614 3.7e-101 372.5 358 65.9
AT2G36740 Arabidopsis thaliana HOM05D006889 ORTHO05D008614 1.4e-100 370.5 357 61.6
AL4G32960 Arabidopsis lyrata HOM05D006889 ORTHO05D008614 1.8e-100 370.2 365 60.5
Aa31LG5G21960 Aethionema arabicum HOM05D006889 ORTHO05D008614 6.9e-100 368.2 370 60.3
CDE08G0956 Ceratophyllum demersum HOM05D006889 ORTHO05D008614 9.0e-100 367.9 355 65.1
Lj4g0013326 Lotus japonicus HOM05D006889 ORTHO05D008614 1.2e-99 367.5 364 63.5
PSO339G0304 Papaver somniferum HOM05D006889 ORTHO05D008614 2.6e-99 366.3 377 60.7
Oeu033252.2 Olea europaea HOM05D006889 ORTHO05D008614 7.6e-99 364.8 399 58.1
BolC4t22783H Brassica oleracea HOM05D006889 ORTHO05D008614 1.3e-98 364.0 363 62.0
BcaC02g11793 Brassica carinata HOM05D006889 ORTHO05D008614 1.7e-98 363.6 363 62.0
BolC4t22767H Brassica oleracea HOM05D006889 ORTHO05D008614 1.7e-98 363.6 363 62.0
A05p09120 Brassica napus HOM05D006889 ORTHO05D008614 2.9e-98 362.8 365 61.9
Phvul.002G186100 Phaseolus vulgaris HOM05D006889 ORTHO05D008614 3.8e-98 362.5 349 64.5
BraA05t19868Z Brassica rapa HOM05D006889 ORTHO05D008614 4.9e-98 362.1 365 61.6
Sabra16G0274600 Salix brachista HOM05D006889 ORTHO05D008614 4.9e-98 362.1 398 60.3
ECA238G0057 Erigeron canadensis HOM05D006889 ORTHO05D008614 6.5e-98 361.7 359 66.0
MD07G1304400 Malus domestica HOM05D006889 ORTHO05D008614 8.4e-98 361.3 353 62.9
C04p11290 Brassica napus HOM05D006889 ORTHO05D008614 1.9e-97 360.1 363 61.7
Sed0014561 Sechium edule HOM05D006889 ORTHO05D008614 7.1e-97 358.2 358 62.6
vmacro10779 Vaccinium macrocarpon HOM05D006889 ORTHO05D008614 9.3e-97 357.8 349 69.1
Ca_18207_v3 Cicer arietinum L. HOM05D006889 ORTHO05D008614 6.0e-96 355.1 353 63.7
Cc02_g09110 Coffea canephora HOM05D006889 ORTHO05D008614 3.9e-95 352.4 361 61.8
BcaB02g09334 Brassica carinata HOM05D006889 ORTHO05D008614 4.3e-94 349.0 368 58.4
Actinidia31405 Actinidia chinensis HOM05D006889 ORTHO05D008614 7.4e-94 348.2 296 72.6
Nitab4.5_0002651g0040 Nicotiana tabacum HOM05D006889 ORTHO05D008614 3.7e-93 345.9 345 65.8
SGA_v2.0_scaffold62G21307 Striga asiatica HOM05D006889 ORTHO05D008614 6.3e-93 345.1 387 58.1
Glyma.05G136000 Glycine max HOM05D006889 ORTHO05D008614 1.1e-92 344.4 347 64.0
Hund18033 Selenicereus undatus HOM05D006889 ORTHO05D008614 5.3e-92 342.0 368 59.8
Gohir.D06G150400 Gossypium hirsutum HOM05D006889 ORTHO05D008614 1.2e-91 340.9 272 71.3
Os08g0192400 Oryza sativa ssp. japonica HOM05D006889 ORTHO05D008614 1.0e-90 337.8 355 61.7
HanXRQChr07g0200571 Helianthus annuus HOM05D006889 ORTHO05D008614 1.9e-89 333.6 366 59.3
HPP92_000052 Vanilla planifolia HOM05D006889 ORTHO05D008614 3.2e-89 332.8 338 63.3
Hma1.2p1_0164F.1_g073300 Hydrangea macrophylla HOM05D006889 ORTHO05D008614 3.0e-87 326.2 284 70.1
MSTRG.4328 Avicennia marina HOM05D006889 ORTHO05D008614 5.1e-87 325.5 352 63.6
arahy.Tifrunner.gnm1.ann1.T52I9D Arachis hypogaea HOM05D006889 ORTHO05D008614 6.7e-87 325.1 381 59.8
CAN.G186.71 Capsicum annuum HOM05D006889 ORTHO05D008614 6.7e-87 325.1 357 58.0
MD07G1075300 Malus domestica HOM05D006889 ORTHO05D008614 5.7e-86 322.0 368 56.8
Psat7g087400 Pisum sativum HOM05D006889 ORTHO05D008614 9.7e-86 321.2 362 59.4
unitig_747.g21800 Utricularia gibba HOM05D006889 ORTHO05D008614 2.2e-85 320.1 343 64.4
arahy.Tifrunner.gnm1.ann1.I4BD9U Arachis hypogaea HOM05D006889 ORTHO05D008614 7.7e-83 311.6 410 55.6
PGR142G0052 Punica granatum HOM05D006889 ORTHO05D008614 2.2e-82 310.1 357 57.4
Nitab4.5_0000930g0060 Nicotiana tabacum HOM05D006889 ORTHO05D008614 2.1e-80 303.5 348 60.9
Sp4g19020 Schrenkiella parvula HOM05D006889 ORTHO05D008614 3.6e-80 302.8 368 53.3
ATR0081G022 Amborella trichopoda HOM05D006889 ORTHO05D008614 3.0e-79 299.7 287 69.7
EL10Ac8g18884 Beta vulgaris HOM05D006889 ORTHO05D008614 3.0e-79 299.7 399 55.6
Thhalv10016833m.g Eutrema salsugineum HOM05D006889 ORTHO05D008614 8.8e-79 298.1 368 53.0
Sc08g0005450 Simmondsia chinensis HOM05D006889 ORTHO05D008614 5.7e-78 295.4 318 58.8
CARHR131100 Cardamine hirsuta HOM05D006889 ORTHO05D008614 2.2e-77 293.5 366 53.0
Ah.14g084260 Amaranthus hybridus HOM05D006889 ORTHO05D008614 1.1e-76 291.2 352 54.5
Peaxi162Scf00135g00913 Petunia axillaris HOM05D006889 ORTHO05D008614 3.6e-72 276.2 307 62.2
Lsat_1_v5_gn_2_107601 Lactuca sativa HOM05D006889 ORTHO05D008614 1.1e-68 264.6 349 55.9
Zm00001eb260210 Zea mays HOM05D006889 ORTHO05D008614 1.8e-68 263.8 353 49.0
MELO3C005447.2 Cucumis melo HOM05D006889 ORTHO05D008614 7.0e-68 261.9 266 69.2
Rhsim09G0213900 Rhododendron simsii HOM05D006889 ORTHO05D008614 1.9e-65 253.8 367 49.9
Rhsim01G0067600 Rhododendron simsii HOM05D006889 ORTHO05D008614 2.5e-65 253.4 360 50.3
TPR.G11931 Trifolium pratense HOM05D006889 ORTHO05D008614 5.5e-57 225.7 356 51.7
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 1.6e-56 224.2 339 45.1
Pp3c14_17650 Physcomitrium patens HOM05D006889 ORTHO05D008614 2.1e-56 223.8 314 54.8
COL.COLO4_31129 Corchorus olitorius HOM05D000112 ORTHO05D000564 1.5e-54 217.6 325 51.4
AUR62028393 Chenopodium quinoa HOM05D006889 ORTHO05D008614 7.5e-54 215.3 405 45.9
AUR62039766 Chenopodium quinoa HOM05D006889 ORTHO05D008614 2.8e-53 213.4 259 62.9
SMO165G0047 Selaginella moellendorffii HOM05D006889 ORTHO05D008614 3.5e-51 206.5 289 48.4
SEGI_10499 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 3.5e-51 206.5 278 53.6
Mapoly0001s0482 Marchantia polymorpha HOM05D006889 ORTHO05D008614 3.4e-46 189.9 164 61.0
DCAR_030020 Daucus carota HOM05D006889 ORTHO05D008614 5.9e-43 179.1 266 44.4
Gohir.D08G083500 Gossypium hirsutum HOM05D006889 ORTHO05D008614 2.1e-40 170.6 171 62.6
SEGI_12666 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 5.7e-38 162.5 149 60.4
CBR_g38961 Chara braunii HOM05D006889 ORTHO05D008614 7.5e-38 162.2 341 42.2
Gorai.004G087700 Gossypium raimondii HOM05D006889 ORTHO05D008614 9.8e-38 161.8 194 56.2
TPR.G8913 Trifolium pratense HOM05D006889 ORTHO05D008614 2.4e-36 157.1 115 79.1
ClCG01G004860 Citrullus lanatus HOM05D006889 ORTHO05D008614 7.0e-28 129.0 196 56.6
SHI02511 Sapria himalayana HOM05D006889 ORTHO05D008614 1.1e-20 105.1 71 81.7
TPR.G34755 Trifolium pratense HOM05D006889 ORTHO05D008614 4.1e-20 103.2 62 88.7
Gohir.D02G011800 Gossypium hirsutum HOM05D004753 ORTHO05D005920 1.2e-14 85.1 172 43.0
Gorai.005G015000 Gossypium raimondii HOM05D004753 ORTHO05D005920 1.5e-14 84.7 172 43.0
Cre17.g728200 Chlamydomonas reinhardtii HOM05D006889 ORTHO05D008614 5.8e-14 82.8 296 33.8
MCO15G439 Micromonas commoda HOM05D006889 ORTHO05D008614 1.4e-12 78.2 299 35.5
PRCOL_00000609 Prasinoderma coloniale HOM05D006889 ORTHO05D008614 4.6e-11 73.2 123 37.4
Gohir.D04G081932 Gossypium hirsutum HOM05D004753 ORTHO05D005920 7.8e-11 72.4 67 67.2
SHI02510 Sapria himalayana HOM05D006889 ORTHO05D008614 2.3e-10 70.9 47 70.2
SHI02512 Sapria himalayana HOM05D006889 ORTHO05D008614 1.5e-09 68.2 81 55.6
FAN28G2910 Fragaria x ananassa HOM05D006889 ORTHO05D008614 4.3e-09 66.6 136 43.4
Cfa024449 Carpinus fangiana HOM05D006889 ORTHO05D008614 3.4e-06 57.0 68 39.7
TPR.G34759 Trifolium pratense HOM05D006889 ORTHO05D008614 4.4e-06 56.6 102 39.2


User provided reference genes

Program Settings