Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_22156 Corylus avellana HOM05D007179 ORTHO05D009124 1.7e-55 219.2 113 100.0
CiPaw.08G039500 Carya illinoinensis HOM05D007179 ORTHO05D009124 4.1e-30 134.8 99 73.7
CiPaw.07G187200 Carya illinoinensis HOM05D007179 ORTHO05D009124 1.6e-29 132.9 99 69.7
arahy.Tifrunner.gnm1.ann1.7FN6WP Arachis hypogaea HOM05D007179 ORTHO05D009124 9.8e-24 113.6 98 59.2
arahy.Tifrunner.gnm1.ann1.8TJD28 Arachis hypogaea HOM05D007179 ORTHO05D009124 1.3e-23 113.2 98 59.2
Psat0s236g0160 Pisum sativum HOM05D007179 ORTHO05D009124 1.3e-23 113.2 98 58.2
MD16G1263600 Malus domestica HOM05D007179 ORTHO05D009124 1.7e-23 112.8 101 61.4
Rhsim01G0010000 Rhododendron simsii HOM05D007179 ORTHO05D009124 8.3e-23 110.5 97 61.9
Prupe.1G095600 Prunus persica HOM05D007179 ORTHO05D009124 2.4e-22 109.0 101 60.4
CANSAT11G0330 Cannabis sativa HOM05D007179 ORTHO05D009124 3.2e-22 108.6 100 62.0
Medtr4g129320 Medicago truncatula HOM05D007179 ORTHO05D009124 4.6e-21 104.8 98 57.1
Gorai.009G007600 Gossypium raimondii HOM05D007179 ORTHO05D009124 3.9e-20 101.7 98 55.1
Dinv41297 Davidia involucrata HOM05D007179 ORTHO05D009124 5.0e-20 101.3 99 55.6
Gohir.D05G007500 Gossypium hirsutum HOM05D007179 ORTHO05D009124 5.0e-20 101.3 98 55.1
TWI63G0613 Tripterygium wilfordii HOM05D007179 ORTHO05D009124 5.0e-20 101.3 102 56.9
TAR626G0641 Trochodendron aralioides HOM05D007179 ORTHO05D009124 1.1e-19 100.1 100 56.0
Ciclev10009752m.g Citrus clementina HOM05D007179 ORTHO05D009124 1.5e-19 99.8 97 53.6
Gohir.A05G006600 Gossypium hirsutum HOM05D007179 ORTHO05D009124 2.5e-19 99.0 98 54.1
Cpa.g.c29666.1 Carica papaya HOM05D007179 ORTHO05D009124 7.3e-19 97.4 75 62.7
Manes.06G029800 Manihot esculenta HOM05D007179 ORTHO05D009124 1.6e-18 96.3 97 56.7
Sed0008122 Sechium edule HOM05D007179 ORTHO05D009124 1.6e-18 96.3 67 68.7
Actinidia24032 Actinidia chinensis HOM05D007179 ORTHO05D009124 2.1e-18 95.9 107 52.3
SalBow1G0390 Salvia bowleyana HOM05D007179 ORTHO05D009124 3.6e-18 95.1 101 51.5
Migut.K00269 Erythranthe guttata HOM05D007179 ORTHO05D009124 6.2e-18 94.4 101 53.5
Lalb_Chr13g0300481 Lupinus albus HOM05D007179 ORTHO05D009124 1.1e-17 93.6 66 68.2
CSS0047035 Camellia sinensis var. sinensis HOM05D007179 ORTHO05D009124 1.4e-17 93.2 105 54.3
Oeu058831.1 Olea europaea HOM05D007179 ORTHO05D009124 1.4e-17 93.2 100 54.0
COL.COLO4_16058 Corchorus olitorius HOM05D007179 ORTHO05D009124 3.1e-17 92.0 92 54.3
Lj9A729T43 Lonicera japonica HOM05D007179 ORTHO05D009124 3.1e-17 92.0 100 52.0
Potri.006G175600 Populus trichocarpa HOM05D007179 ORTHO05D009124 4.0e-17 91.7 98 55.1
Duzib150G1658 Durio zibethinus HOM05D007179 ORTHO05D009124 5.2e-17 91.3 68 66.2
Lj4g0019685 Lotus japonicus HOM05D007179 ORTHO05D009124 6.8e-17 90.9 104 52.9
Sc14g0001110 Simmondsia chinensis HOM05D007179 ORTHO05D009124 6.8e-17 90.9 82 58.5
Atru.chr7.533 Acer truncatum HOM05D007179 ORTHO05D009124 8.9e-17 90.5 88 56.8
GSVIVG01032307001 Vitis vinifera HOM05D007179 ORTHO05D009124 8.9e-17 90.5 102 53.9
FvH4_4g08570 Fragaria vesca HOM05D007179 ORTHO05D009124 1.5e-16 89.7 99 54.5
Sabra06G0134300 Salix brachista HOM05D007179 ORTHO05D009124 2.6e-16 89.0 98 53.1
MELO3C004033.2 Cucumis melo HOM05D007179 ORTHO05D009124 3.4e-16 88.6 97 51.5
Thecc.09G162500 Theobroma cacao HOM05D007179 ORTHO05D009124 4.4e-16 88.2 92 52.2
Glyma.17G067900 Glycine max HOM05D007179 ORTHO05D009124 5.8e-16 87.8 84 52.4
Dinv42771 Davidia involucrata HOM05D007179 ORTHO05D009124 7.5e-16 87.4 100 48.0
Nn1g04316 Nelumbo nucifera HOM05D007179 ORTHO05D009124 1.3e-15 86.7 102 52.9
PGR102G1777 Punica granatum HOM05D007179 ORTHO05D009124 2.2e-15 85.9 100 55.0
MSTRG.26242 Avicennia marina HOM05D007179 ORTHO05D009124 2.9e-15 85.5 98 48.0
DCAR_017946 Daucus carota HOM05D007179 ORTHO05D009124 4.9e-15 84.7 79 58.2
ClCG11G012230 Citrullus lanatus HOM05D007179 ORTHO05D009124 2.4e-14 82.4 67 61.2
RcHm_v2.0_Chr4g0404651 Rosa chinensis HOM05D007179 ORTHO05D009124 2.4e-14 82.4 98 53.1
PGSC0003DMG400027448 Solanum tuberosum HOM05D007179 ORTHO05D009124 2.4e-14 82.4 96 49.0
CsaV3_2G008330 Cucumis sativus L. HOM05D007179 ORTHO05D009124 1.6e-13 79.7 93 51.6
Aqoxy7G03201 Aquilegia oxysepala HOM05D007179 ORTHO05D009124 2.0e-13 79.3 109 45.0
Solyc07g006490.3 Solanum lycopersicum HOM05D007179 ORTHO05D009124 2.7e-13 79.0 96 46.9
Sopen07g002570 Solanum pennellii HOM05D007179 ORTHO05D009124 2.7e-13 79.0 96 46.9
Lsat_1_v5_gn_8_65641 Lactuca sativa HOM05D007179 ORTHO05D009124 3.5e-13 78.6 99 45.5
THA.LOC104817810 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 1.0e-12 77.0 69 56.5
C01p24450 Brassica napus HOM05D007179 ORTHO05D009124 1.3e-12 76.6 95 50.5
Peaxi162Scf00457g00318 Petunia axillaris HOM05D007179 ORTHO05D009124 1.7e-12 76.3 97 49.5
BraA01t01881Z Brassica rapa HOM05D007179 ORTHO05D009124 2.3e-12 75.9 75 57.3
Carub.0007s1277 Capsella rubella HOM05D007179 ORTHO05D009124 2.3e-12 75.9 74 55.4
BcaNung01603 Brassica carinata HOM05D007179 ORTHO05D009124 3.9e-12 75.1 88 53.4
ECA236G0374 Erigeron canadensis HOM05D007179 ORTHO05D009124 3.9e-12 75.1 77 46.8
THA.LOC104811817 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 3.9e-12 75.1 67 59.7
A01p19410 Brassica napus HOM05D007179 ORTHO05D009124 5.0e-12 74.7 75 56.0
AT4G28025 Arabidopsis thaliana HOM05D007179 ORTHO05D009124 8.6e-12 73.9 85 51.8
AL7G24590 Arabidopsis lyrata HOM05D007179 ORTHO05D009124 1.1e-11 73.6 85 50.6
CAN.G584.44 Capsicum annuum HOM05D007179 ORTHO05D009124 1.5e-11 73.2 68 52.9
Hund26395 Selenicereus undatus HOM05D007179 ORTHO05D009124 1.9e-11 72.8 70 52.9
BolC1t02394H Brassica oleracea HOM05D007179 ORTHO05D009124 2.5e-11 72.4 66 59.1
Eucgr.C02437 Eucalyptus grandis HOM05D007179 ORTHO05D009124 3.3e-11 72.0 53 66.0
Thhalv10026434m.g Eutrema salsugineum HOM05D007179 ORTHO05D009124 3.3e-11 72.0 88 50.0
MBI15_g26085_MAGBIO Magnolia biondii HOM05D007179 ORTHO05D009124 4.3e-11 71.6 57 66.7
Aa31LG3G160 Aethionema arabicum HOM05D007179 ORTHO05D009124 7.3e-11 70.9 66 62.1
Cc06_g13840 Coffea canephora HOM05D007179 ORTHO05D009124 7.3e-11 70.9 87 44.8
VMungo1215G3157 Vigna mungo HOM05D007179 ORTHO05D009124 7.3e-11 70.9 83 47.0
AUR62040282 Chenopodium quinoa HOM05D007179 ORTHO05D009124 9.5e-11 70.5 98 45.9
Hund08993 Selenicereus undatus HOM05D007179 ORTHO05D009124 1.2e-10 70.1 75 53.3
HanXRQChr05g0136491 Helianthus annuus HOM05D007179 ORTHO05D009124 1.6e-10 69.7 97 47.4
Nitab4.5_0011540g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 1.6e-10 69.7 50 70.0
BolC7t46066H Brassica oleracea HOM05D007179 ORTHO05D009124 2.1e-10 69.3 74 56.8
C07p55870 Brassica napus HOM05D007179 ORTHO05D009124 2.8e-10 68.9 73 57.5
AUR62039974 Chenopodium quinoa HOM05D007179 ORTHO05D009124 2.8e-10 68.9 98 44.9
Sp7g25970 Schrenkiella parvula HOM05D007179 ORTHO05D009124 2.8e-10 68.9 92 45.7
BraA03t14832Z Brassica rapa HOM05D007179 ORTHO05D009124 3.6e-10 68.6 105 45.7
A03p57660 Brassica napus HOM05D007179 ORTHO05D009124 6.2e-10 67.8 105 45.7
CARHR235720 Cardamine hirsuta HOM05D007179 ORTHO05D009124 1.8e-09 66.2 86 47.7
BcaC06g32651 Brassica carinata HOM05D007179 ORTHO05D009124 3.1e-09 65.5 75 53.3
unitig_37.g12688 Utricularia gibba HOM05D007179 ORTHO05D009124 4.0e-09 65.1 62 53.2
Dinv43332 Davidia involucrata HOM05D007179 ORTHO05D009124 8.9e-09 63.9 61 47.5
PSO063G6628 Papaver somniferum HOM05D007179 ORTHO05D009124 2.6e-08 62.4 100 43.0
Phvul.003G150500 Phaseolus vulgaris HOM05D007179 ORTHO05D009124 4.4e-08 61.6 67 50.7
PSO782G3484 Papaver somniferum HOM05D007179 ORTHO05D009124 2.9e-07 58.9 101 42.6
ATR0580G253 Amborella trichopoda HOM05D007179 ORTHO05D009124 6.4e-07 57.8 77 44.2
Ca_21187_v3 Cicer arietinum L. HOM05D000001 ORTHO05D009942 8.3e-07 57.4 38 76.3
EL10Ac8g18859 Beta vulgaris HOM05D007179 ORTHO05D009124 1.9e-06 56.2 38 73.7
Actinidia24777 Actinidia chinensis HOM05D007179 ORTHO05D009124 3.2e-06 55.5 36 80.6
Zm00001eb184420 Zea mays HOM05D007179 ORTHO05D009124 3.2e-06 55.5 75 44.0
CDE05G2983 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 7.1e-06 54.3 65 46.2


User provided reference genes

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